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Reproducibility crisis in diffusion MRI: Contribution of software processing pipelines

Author:Suheyla Cetin Karayumak  Lily O’Sullivan  Monica Lyons  Tashrif Billah  Ofer Pasternak  Sylvain Bouix  Marek Kubicki  Yogesh Rathi  

Institution:Brigham and Women's Hospital  Harvard Medical School  

Session Type:Digital Poster  

Session Live Q&A Date:Digital Poster (All Week)  

Topic:Diffusion Acquisition, Reconstruction and Signal Analysis  

Session Name:Diffusion: Methods  

Program Number:4380  

Room Live Q&A Session:

Resolving orientation-specific diffusivities and transverse relaxation rates in heterogenous brain tissue

Author:Alexis Reymbaut  João de Almeida Martins  Chantal Tax  Filip Szczepankiewicz  Derek Jones  Daniel Topgaard  

Institution:Cardiff University Brain Research Imaging Centre (CUBRIC), School of Psychology, Cardiff University  Harvard Medical School  Lund University  Radiology, Brigham and Women’s Hospital  Random Walk Imaging AB  

Session Type:Digital Poster  

Session Live Q&A Date:Digital Poster (All Week)  

Topic:Diffusion Acquisition, Reconstruction and Signal Analysis  

Session Name:Diffusion Signal Analysis 2  

Program Number:4409  

Room Live Q&A Session:

Resting State Functional Connectivity and Angiogenesis-related Gene Co-Expression Networks in early brain development

Author:Serafeim Loukas  Sandra Martin  Joana Sa de Almeida  Lana Vasung  Dimitri Van De Ville  Djalel Meskaldji  Petra Hüppi  

Institution:Ecole Polytechnique Fédérale de Lausanne (EPFL)  University of Geneva  Harvard Medical School  

Session Type:Digital Poster  

Session Live Q&A Date:Digital Poster (All Week)  

Topic:Pediatric: Fetal & Developmental Brain  

Session Name:Pediatric Neuro: Development  

Program Number:4588  

Room Live Q&A Session:

Retrospective Electromagnetic interference mitigation in a portable low field MRI system

Author:Sai Abitha Srinivas  Clarissa Z Cooley  Jason Stockmann  Patrick McDaniel  Lawrence Wald  

Institution:Athinoula A Martinos Center for Biomedical Imaging  Harvard Medical School  Massachusetts Institute of Technology  Harvard-MIT Division of Health Sciences and Technology  

Session Type:Oral  

Session Live Q&A Date:Thursday, 13 August 2020  

Topic:Novel Hardware  

Session Name:Hardware Components  

Program Number:1269  

Room Live Q&A Session:Thursday Parallel 5  

Return-to-origin probability from single-shell and multi-shell diffusion MRI data correlates with normal aging

Author:Qiyuan Tian  Qiuyun Fan  Kimberly Stephens  Chanon Ngamsombat  Maya Polackal  Brian Edlow  Jennifer McNab  David Salat  Susie Huang  

Institution:Massachusetts General Hospital  Stanford University  Harvard Medical School  

Session Type:Oral - Power Pitch  

Session Live Q&A Date:Monday, 10 August 2020  

Topic:Neurodegeneration 1  

Session Name:Our Aging Brains: What's "Normal"?  

Program Number:0195  

Room Live Q&A Session:Monday Parallel 2  

Rigorous Prospective Reduction of Inter-scanner Variance of Diffusion Imaging: Initial Experience

Author:Vincent Lee  Benjamin Meyers  William Reynolds  Rafael Ceschin  Vincent Schmithorst  Jeffrey Berman  Thomas Chenevert  Borjan Gagoski  Peter LaViolette  Deqiang Qiu  Sudhir Pathak  Ashok Panigrahy  Walter Schneider  

Institution:Children's Hospital of Philadelphia  Emory University  Harvard Medical School  Medical College of Wisconsin  University of Michigan  University of Pittsburgh  

Session Type:Digital Poster  

Session Live Q&A Date:Digital Poster (All Week)  

Topic:Diffusion Applications  

Session Name:Diffusion: Brain Applications 1  

Program Number:4513  

Room Live Q&A Session:

Scan-Rescan Reliability of Microstructural Imaging Metrics Derived from High-Gradient Diffusion MRI

Author:Maya Polackal  Qiyuan Tian  Chanon Ngamsombat  Aapo Nummenmaa  Thomas Witzel  Eric Klawiter  Susie Huang  Qiuyun Fan  

Institution:Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital  Massachusetts General Hospital  Harvard Medical School  Faculty of Medicine, Siriraj Hospital  Massachusetts Institute of Technology  

Session Type:Digital Poster  

Session Live Q&A Date:Digital Poster (All Week)  

Topic:Diffusion Microstructure, Modeling and Tractography  

Session Name:Diffusion: Microstructure 3  

Program Number:4456  

Room Live Q&A Session:

Scan-specific assessment of vNav motion artifact mitigation in the HCP Aging study using reverse motion correction

Author:Robert Frost  M. Tisdall  Malte Hoffmann  Bruce Fischl  David Salat  André van der Kouwe  

Institution:Massachusetts General Hospital  University of Pennsylvania  Harvard Medical School  Massachusetts Institute of Technology  

Session Type:Oral  

Session Live Q&A Date:Tuesday, 11 August 2020  

Topic:Managing Motion and Artifacts  

Session Name:Mind Your Head: Managing Motion in the Brain  

Program Number:0467  

Room Live Q&A Session:Tuesday Parallel 4  

Scan-specific, Parameter-free Artifact Reduction in K-space (SPARK)

Author:Onur Beker  Congyu Liao  Jaejin Cho  Zijing Zhang  Kawin Setsompop  Berkin Bilgic  

Institution:Martinos Center for Biomedical Imaging  Zhejiang University  Harvard Medical School  Bogazici University  Harvard/MIT Health Sciences and Technology  

Session Type:Digital Poster  

Session Live Q&A Date:Digital Poster (All Week)  

Topic:Novel Acquisition, Reconstruction, and Analysis  

Session Name:Novel Acquisitions & Reconstructions: Parallel Imaging  

Program Number:3435  

Room Live Q&A Session:

Scout Acquisition enables rapid Motion Estimation (SAME) for retrospective motion mitigation.

Author:Daniel Polak  Stephen Cauley  Berkin Bilgic  Daniel Splitthoff  Peter Bachert  Lawrence Wald  Kawin Setsompop  

Institution:A. A. Martinos Center for Biomedical Imaging  Heidelberg University  Siemens Healthcare GmbH  Harvard Medical School  Massachusetts Institute of Technology  

Session Type:Oral  

Session Live Q&A Date:Tuesday, 11 August 2020  

Topic:Managing Motion and Artifacts  

Session Name:Mind Your Head: Managing Motion in the Brain  

Program Number:0463  

Room Live Q&A Session:Tuesday Parallel 4  

Segmented spin-echo BOLD fMRI using a variable flip angle FLEET acquisition with recursive RF pulse design for high spatial resolution fMRI

Author:Avery Berman  William Grissom  Thomas Witzel  Daniel Park  Olivia Viessmann  Kawin Setsompop  Jonathan Polimeni  

Institution:Massachusetts General Hospital  Vanderbilt University Institute of Imaging Science  Harvard Medical School  Massachusetts Institute of Technology  

Session Type:Digital Poster  

Session Live Q&A Date:Digital Poster (All Week)  

Topic:fMRI: Acquisition & Applications  

Session Name:fMRI Acquisition 2  

Program Number:3881  

Room Live Q&A Session:

Simulation of electromagnetic cardiac stimulation: Validation in dogs and application to human threshold limits for MRI gradient coils

Author:Valerie Klein  Mathias Davids  Lothar Schad  Lawrence Wald  Bastien Guérin  

Institution:A. A. Martinos Center for Biomedical Imaging, Department of Radiologoy, Massachusetts General Hospital  Computer Assisted Clinical Medicine, Medical Faculty Mannheim, Heidelberg University  Harvard Medical School  Harvard-MIT Division of Health Sciences a  

Session Type:Oral  

Session Live Q&A Date:Thursday, 13 August 2020  

Topic:Engineering and Safety of MRI  

Session Name:MRI Safety  

Program Number:1125  

Room Live Q&A Session:Thursday Parallel 5  

Simultaneous distortion and motion correction in abdominal DW-MRI using dual echo EPI and slice-to-volume registration

Author:Jaume Coll-Font  Onur Afacan  Scott Hoge  Bahram Marami  Ali Gholipour  Jeanne Chow  Simon Warfield  Sila Kurugol  

Institution:Boston Children's Hospital  Brigham and Women's Hospital  Icahn School of Medicine at Mount Sinai  Harvard Medical School  

Session Type:Oral - Power Pitch  

Session Live Q&A Date:Wednesday, 12 August 2020  

Topic:Diffusion Acquisition and Reconstruction  

Session Name:Diffusion: Acquisition, Reconstruction & Processing  

Program Number:0974  

Room Live Q&A Session:Wednesday Parallel 4  

Single-shot T2-weighted Fetal MRI with variable flip angles, full k-space sampling, and nonlinear inversion: towards improved SAR and sharpness

Author:Yamin Arefeen  Borjan Gagoski  Esra Turk  Ellen Grant  Jacob White  Kawin Setsompop  Elfar Adalsteinsson  

Institution:Athinoula A. Martinos Center for Biomedical Imaging  Boston Children’s Hospital  Massachusetts Institute of Technology  Harvard Medical School  Harvard-MIT Health Sciences and Technology  Institute for Medical Engineering and Science  

Session Type:Digital Poster  

Session Live Q&A Date:Digital Poster (All Week)  

Topic:Abdominopelvic MRI - Benign  

Session Name:Female Pelvis & Maternal-Fetal Imaging  

Program Number:2574  

Room Live Q&A Session:

Single-sided magnet design for an MR guided lumbar puncture (LP) device

Author:Clarissa Cooley  Patrick McDaniel  Jason Stockmann  Farrah Mateen  Lawrence Wald  

Institution:Massachusetts General Hospital  Harvard Medical School  Massachusetts Institute of Technology  Harvard-MIT Division of Health Sciences and Technology  

Session Type:Oral  

Session Live Q&A Date:Thursday, 13 August 2020  

Topic:Novel Hardware  

Session Name:Hardware Components  

Program Number:1266  

Room Live Q&A Session:Thursday Parallel 5  

SlicerDMRI: a suite of clinician-accessible tools for neurosurgical planning research using diffusion MRI and tractography

Author:Fan Zhang  Thomas Noh  Parikshit Juvekar  Sarah Frisken  Laura Rigolo  Isaiah Norton  Tina Kapur  Sonia Pujol  William Wells III  Alex Yarmarkovich  Gordon Kindlmann  Demian Wassermann  Raul San Jose Estepar  Yogesh Rathi  Ron Kikinis   John  

Institution:Harvard Medical School  Isomics, Inc.  Université Paris-Saclay  University of Chicago  University of Iowa  Massachusetts Institute of Technology  University of Bremen and Fraunhofer MEVIS  

Session Type:Digital Poster  

Session Live Q&A Date:Digital Poster (All Week)  

Topic:Diffusion Microstructure, Modeling and Tractography  

Session Name:Orientation Modelling & Fibre Tractography 2  

Program Number:4489  

Room Live Q&A Session:

Small Sample Size, Unprecedented Data Quality: Challenges & Opportunities in High-End Data Acquisition

Author:Jonathan Polimeni  

Institution:Massachusetts General Hospital  Harvard Medical School  Massachusetts Institute of Technology  

Session Type:Weekend Course  

Session Live Q&A Date:Sunday, 9 August 2020  

Topic:Joint MICCAI-ISMRM Session: Synergies Between Our Societies in Data Acquisition, Image Reconstruction & Analysis  

Session Name:Joint MICCAI-ISMRM Session: Synergies Between Our Societies in Data Acquisition, Image Reconstruction & Analysis  

Program Number:

Room Live Q&A Session:Sunday Parallel 3  

    SNR efficient diffusion imaging at 7T with B1+ mitigated multi-shot SMS-EPI, using semi adiabatic PINS RF and low-rank completion reconstruction

    Author:SoHyun Han  Rebecca E. Feldman  Mary Kate Manhard  Congyu Liao  Seong-Gi Kim  Priti Balchandani  Kawin Setsompop  

    Institution:Icahn School of Medicine at Mount Sinai  Institute for Basic Science (IBS)  Massachusetts General Hospital  University of British Columbia  Harvard Medical School  

    Session Type:Digital Poster  

    Session Live Q&A Date:Digital Poster (All Week)  

    Topic:Diffusion Acquisition, Reconstruction and Signal Analysis  

    Session Name:Diffusion: Acquisition 1  

    Program Number:4297  

    Room Live Q&A Session:

    Stay on the beat: tuning in on time-dependent diffusion in the heart

    Author:Henrik Lundell  Samo Lasic  Filip Szczepankiewicz  Markus Nilsson  Daniel Topgaard  Jürgen Schneider  Irvin Teh  

    Institution:Copenhagen University Hospital Hvidovre  Lund University  University of Leeds  Harvard Medical School  Random Walk Imaging AB  Brigham and Women's Hospital  

    Session Type:Oral  

    Session Live Q&A Date:Wednesday, 12 August 2020  

    Topic:Diffusion Acquisition and Reconstruction  

    Session Name:Diffusion: Acquisition  

    Program Number:0959  

    Room Live Q&A Session:Wednesday Parallel 4  

    T2-BUDA-gSlider: fast T2 mapping with blip-up/down acquisition, generalized SLIce Dithered Enhanced Resolution and subspace reconstruction

    Author:Xiaozhi Cao  Congyu Liao  Zijing Zhang  Siddharth Iyer  Hongjian He  Kawin Setsompop  Jianhui Zhong  Berkin Bilgic  

    Institution:Harvard Medical School  Harvard-MIT Department of Health Sciences and Technology  Massachusetts General Hospital  Massachusetts Institute of Technology  Zhejiang University  

    Session Type:Oral  

    Session Live Q&A Date:Wednesday, 12 August 2020  

    Topic:Advances in Quantitative MRI  

    Session Name:Quantitative Relaxation Parameter Mapping: Better, Faster, Stronger  

    Program Number:0890  

    Room Live Q&A Session:Wednesday Parallel 5  

    Tortuosity assumption not the cause of NODDI’s incompatibility with tensor-valued diffusion encoding

    Author:Michele Guerreri  Filip Szczepankiewicz  Björn Lampinen  Marco Palombo  Markus Nilsson  Hui Zhang  

    Institution:Lund University  University College London  Harvard Medical School  

    Session Type:Oral - Power Pitch  

    Session Live Q&A Date:Wednesday, 12 August 2020  

    Topic:Diffusion Microstructure Modeling and Validation  

    Session Name:Diffusion & Microstructure: Modelling & Validation  

    Program Number:0736  

    Room Live Q&A Session:Wednesday Parallel 4  

    Toward “plug and play” prospective motion correction for MRI by combining observations of the time varying gradient and static vector fields.

    Author:Adam van Niekerk  Andre van der Kouwe  Ernesta Meintjes  

    Institution:University of Cape Town  Cape Universities Body Imaging Centre  Massachusetts General Hospital  Harvard Medical School  

    Session Type:Oral  

    Session Live Q&A Date:Monday, 10 August 2020  

    Topic:Young Investigator Awards  

    Session Name:Young Investigator Awards  

    Program Number:0006  

    Room Live Q&A Session:Monday YIA  

    Toward “plug and play” prospective motion correction for MRI by combining observations of the time varying gradient and static vector fields.

    Author:Adam van Niekerk  Andre van der Kouwe  Ernesta Meintjes  

    Institution:University of Cape Town  Cape Universities Body Imaging Centre  Massachusetts General Hospital  Harvard Medical School  

    Session Type:Power Pitch Poster  

    Session Live Q&A Date:Monday, 10 August 2020  

    Topic:Young Investigator Awards  

    Session Name:Young Investigator Awards  

    Program Number:0006  

    Room Live Q&A Session:Room C4.5  

    Towards unconstrained compartment modeling in white matter using diffusion-relaxation MRI with tensor-valued diffusion encoding

    Author:Björn Lampinen  Filip Szczepankiewicz  Johan Mårtensson  Danielle van Westen  Oskar Hansson  Carl-Fredrik Westin  Markus Nilsson  

    Institution:Harvard Medical School  Lund University  

    Session Type:Oral - Power Pitch  

    Session Live Q&A Date:Wednesday, 12 August 2020  

    Topic:Diffusion Microstructure Modeling and Validation  

    Session Name:Diffusion & Microstructure: Modelling & Validation  

    Program Number:0732  

    Room Live Q&A Session:Wednesday Parallel 4  

    A unified framework for analysis of time-dependent diffusion: numerical validation of a restriction-exchange correlation experiment

    Author:Markus Nilsson  Carl-Fredrik Westin  Jan Brabec  Samo Lasic  Filip Szczepankiewicz  

    Institution:Harvard Medical School  Lund University  Random Walk Imaging AB  

    Session Type:Oral  

    Session Live Q&A Date:Wednesday, 12 August 2020  

    Topic:Diffusion Microstructure Modeling and Validation  

    Session Name:Diffusion: Microstructure Modelling  

    Program Number:0718  

    Room Live Q&A Session:Wednesday Parallel 4  

    Use of high-resolution QSM to identify global patterns in the ex vivo human brain cortex at 7T

    Author:Leah Morgan  Berkin Bilgic  Andre van der Kouwe  Jean Augustinack  Jonathan Polimeni  Anna Blazejewska  Viviana Siless  Allison Stevens  Bram Diamond  Natalya Slepneva  Bruce Fischl  Divya Varadarajan  

    Institution:A. A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital  Harvard Medical School  Harvard-MIT Division of Health Sciences and Technology  

    Session Type:Digital Poster  

    Session Live Q&A Date:Digital Poster (All Week)  

    Topic:Quantitative Tissue Properties and Novel Contrast Mechanisms  

    Session Name:QSM & Its Methods  

    Program Number:3208  

    Room Live Q&A Session:

    Vascular effects in fMRI during respiratory-gated auricular vagal nerve stimulation

    Author:Nikos Priovoulos  Dimo Ivanov  Benedikt Poser  Linda Pagen  Vitaly Napadow  Roberta Sclocco  Frans Verhey  Heidi Jacobs  

    Institution:Harvard Medical School  Maastricht University  Logan University  

    Session Type:Digital Poster  

    Session Live Q&A Date:Digital Poster (All Week)  

    Topic:fMRI: Contrast & Physiology  

    Session Name:fMRI Physiology 2  

    Program Number:3846  

    Room Live Q&A Session:

    Vessel architectural imaging in the human heart using heartbeat-to-heartbeat GESE-EPI

    Author:Maaike van den Boomen  Mary Kate Manhard  Kyrre Emblem  David Sosnovik  Niek Prakken  Christopher Nguyen  Kawin Setsompop  Ronald Borra  

    Institution:Massachusetts General Hospital  Oslo University Hospital  University Medical Center Groningen  Harvard Medical School  Harvard-MIT  

    Session Type:Oral - Power Pitch  

    Session Live Q&A Date:Thursday, 13 August 2020  

    Topic:Novel imaging techniques for CMR  

    Session Name:Cardiovascular Power Pitch: Technical  

    Program Number:1095  

    Room Live Q&A Session:Thursday Parallel 3  

    Visualization enhancement and quantitative analysis of relaxation time in medial temporal lobe epilepsy based on 3D high-resolution MRF

    Author:Xiaozhi Cao  Kang Wang  Congyu Liao  Dengchang Wu  Qing Li  Ziyang Chen  Jun Li  Huihui Ye  Hongjian He  Jianhui Zhong  

    Institution:Massachusetts General Hospital  the First Affiliated Hospital, School of Medicine, Zhejiang University  Zhejiang University  Harvard Medical School  

    Session Type:Oral - Power Pitch  

    Session Live Q&A Date:Wednesday, 12 August 2020  

    Topic:Neurodegeneration 2  

    Session Name:Epilepsy  

    Program Number:0932  

    Room Live Q&A Session:Wednesday Parallel 2