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A diffusion MRI pipeline leveraging Nextflow & Singularity: Robust, Efficient, Reproducible in time!

Author:Guillaume Theaud  Jean-Christophe Houde  Felix Morency  Maxime Descoteaux  

Institution:Imeka Solutions Inc  Sherbrooke Connectivity Imaging Laboratory (SCIL), Université de Sherbrooke  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3580  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 72  

A Graph Theory and Spectral Graph Theory Approach to Correlating Tractography with Parkinson’s Disease.

Author:Daniel DeYoung  Manish Amin  Catherine Price  Thomas Mareci  

Institution:University of Florida  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3582  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 74  

An in vivo investigation on quantitative metrics of diffusion kurtosis tensor: the effect of diffusion gradient parameters in the clinical setting

Biases of microstructure models in baby diffusion MRI

Author:Khoi Huynh  Tiantian Xu  Ye Wu  Geng Chen  Weili Lin  Dinggang Shen  Pew-Thian Yap  the UNC/UMN Baby Connectome Project Consortium  

Institution:The University of North Carolina at Chapel Hill  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3573  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 65  

Computational frameworks for multi-fascicle models: impact on microstructural descriptors

Author:Benjamin Schloesing  Maxime Taquet  Jean-Philippe Thiran  Simon Warfield  Benoit Scherrer  

Institution:École polytechnique fédérale de Lausanne  Harvard Medical School  Harvard Medical School  University of Oxford  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3566  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 58  

Dependence of harmonic power on b-value for fiber ball imaging: comparison of theory and experiment

Author:Hunter Moss  Emilie McKinnon  Joseph Helpern  Jens Jensen  

Institution:Medical University of South Carolina  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3571  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 63  

Diffusion Kurtosis Imaging of the Brain with Free Water Elimination

Author:Teddy Salan  Sulaiman Sheriff  Varan Govind  

Institution:Miller School of Medicine, University of Miami  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3581  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 73  

Diffusion of the perivascular space fluid is anisotropic in conventional DWI

Author:Farshid Sepehrband  Ryan Cabeen  Jeiran Choupan  Giuseppe Barisano  Meng Law  Arthur Toga  

Institution:University of Southern California  Alfred Health  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3570  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 62  

Diffusion time dependence in the mid-time regime: a simulation study using PGSE.

Author:Annelinde Buikema  Arjan Dekker  Jan Sijbers  

Institution:imec-Visionlab, Department of Physics, University of Antwerp,  Delft Center for Systems and Control, Delft University of Technology  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3572  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 64  

Estimating mixtures of 6D diffusion tensor distributions with "Magic DIAMOND": are b-plates better than b-spheres?

Improving reproducibility of diffusion connectome analysis using deep convolutional neural network model

Author:Min-Hee Lee  Nolan O'Hara  Jeong-Won Jeong  

Institution:Wayne State University School of Medicine  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3578  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 70  

Improving Tractography in Baby Diffusion MRI via Asymmetric Spectrum Imaging

Author:Ye Wu  Weili Lin  Dinggang Shen  Pew-Thian Yap  the UNC/UMN Baby Connectome Project Consortium Consortium  

Institution:University of North Carolina, Chapel Hill  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3569  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 61  

Investigating the Benefits of Incorporating Higher Order Spherical Harmonics in Axon Diameter Measurements

Author:Qiuyun Fan  Aapo Nummenmaa  Qiyuan Tian  Ned Ohringer  Thomas Witzel  Lawrence Wald  Bruce Rosen  Susie Huang  

Institution:Massachusetts General Hospital  Harvard Medical School  Harvard Medical School  Massachusetts Institute of Technology  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3564  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 56  

Machine learning based estimation of axonal properties in the presence of beading

Author:Kévin GINSBURGER  Felix MATUSCHKE  Fabrice Poupon  Jean-François Mangin  Markus AXER  Cyril Poupon  

Institution:CEA/Joliot/Neurospin  Research Centre Jülich, Institute of Neuroscience and Medicine, Jülich, Germany  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3559  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 51  

MicroLearn: Framework for machine learning, reconstruction, optimization and microstructure modeling

MicroQIT - A Computational Framework for Population Microstructure Imaging

Author:Ryan Cabeen  Arthur Toga  

Institution:Keck School of Medicine of USC  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3574  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 66  

Non-parametric axon diameter distribution mapping with PGSE: reconstruction of uni- and multimodal distributions

On the feasibility of apparent exchange rate mapping in non-periodic systems with multiple cell sizes

Permeable Barrier Modeling of Age Induced Changes in the Time Dependent Diffusion Eigenvalues

Author:Vadim Malis  Sinha Shantanu  Edward Smitaman  Usha Sinha  

Institution:San Diego State University  UC San Diego  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3561  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 53  

Polynomial Meta-Model of Bloch-Torrey Equation for Track-based Regularization of Microstructural Inversion

Author:Noel Naughton  Arihant Jain  John Georgiadis  

Institution:Illinois Institute of Technology  Univeristy of Illinois at Urbana Champaign  University of Illinois at Urbana Champaign  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3568  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 60  

Powering Up Microstructural Imaging:  assessing cross-metric and cross-tract statistical power on an ultra-strong gradient MRI system

Author:Kristin Koller  Suryanarayana Umesh Rudapandra  Maxime Chamberland  Erika Raven  Greg Parker  Chantal Tax  Mark Drakesmith  John Evans  Tobias Wood  Derek Jones  

Institution:Cardiff University  King's College London  King's College London  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3577  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 69  

Resolving crossing fibers with the inclusion of intra-axonal diffusion modeling

Author:Chunyu Song  Peng Sun  Zezhong Ye  Sheng-Kwei (Victor) Song  

Institution:Washington University in St. Louis  Washington University School of Medicine, St. Louis, MO, United States  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3579  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 71  

Tensorial formulation allowing to verify or falsify the microstructural standard model from multidimensional diffusion MRI

Author:Jose Pozo  Santiago Coelho  Alejandro Frangi  

Institution:University of Leeds  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3560  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 52  

Test-retest reliability of 3-tissue constrained spherical deconvolution of diffusion MRI data by analysis of three separate cohorts

Author:Benjamin Newman  Thijs Dhollander  Kristen Reynier  Matthew Panzer  Thomas Druzgal  

Institution:University of Melbourne  University of Virginia  The Florey Institute of Neuroscience and Mental Health  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3576  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 68