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A diffusion MRI pipeline leveraging Nextflow & Singularity: Robust, Efficient, Reproducible in time!

Author:Guillaume Theaud  Jean-Christophe Houde  Felix Morency  Maxime Descoteaux  

Institution:Imeka Solutions Inc  Sherbrooke Connectivity Imaging Laboratory (SCIL), Université de Sherbrooke  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:09:15  

Session Name:Microstructure Modeling: 1  

Program Number:3580  

Presentation Time:09:15   

Room Number:Exhibition Hall  

Computer Number:Computer 72  

A surface-based shape analysis of the human corticospinal tract

Author:Gabrielle Grenier  Étienne St-Onge  Maxime Descoteaux  

Institution:Sherbrooke Connectivity Imaging Laboratory (SCIL), Université de Sherbrooke  

Session Type:Digital Poster  

Session Date:Wednesday, 15 May 2019  

Session Time:08:15  

Session Name:Diffusion MRI: Fiber Orientations & Tracking  

Program Number:3383  

Presentation Time:08:15   

Room Number:Exhibition Hall  

Computer Number:Computer 45  

Advanced diffusion-weighted imaging reveals distinct neuropathological processes in concussed youth

Author:Guido Guberman  Jean-Christophe Houde  Isabelle Gagnon  Alain Ptito  Maxime Descoteaux  

Institution:McGill University  Montreal Children's Hospital  University of Sherbrooke  

Session Type:Oral  

Session Date:Monday, 13 May 2019  

Session Time:08:15  

Session Name:Traumatic Brain Injury  

Program Number:0082  

Presentation Time:09:27   

Room Number:Room 513D-F  

Computer Number:

An Overview of Survey Results

Author:Maxime Descoteaux  

Institution:Université de Sherbrooke  

Session Type:Member-Initiated Symposium  

Session Date:Wednesday, 15 May 2019  

Session Time:13:30  

Session Name:The Road to Consensus in Diffusion MRI: How Far Are We?  

Program Number:

Presentation Time:13:30   

Room Number:Room 516AB  

Computer Number:

    Estimating mixtures of 6D diffusion tensor distributions with "Magic DIAMOND": are b-plates better than b-spheres?

    Evaluating Neurite Density and Orientation in the White Matter of Youth Born with Congenital Heart Disease

    Gradient profiles of myelin and microstructure metrics across the developing brain

    HARDI denoising with mean-curvature enhancement PDE on SE(3)

    Author:Etienne St-Onge  Stephan Meesters  Erick J Bekkers  Maxime Descoteaux  Remco Duits  

    Institution:Eindhoven University of Technology  Eindhoven University of Technology  Université de Sherbrooke  

    Session Type:Digital Poster  

    Session Date:Wednesday, 15 May 2019  

    Session Time:08:15  

    Session Name:Diffusion MRI: Artefact Correction  

    Program Number:3409  

    Presentation Time:08:15   

    Room Number:Exhibition Hall  

    Computer Number:Computer 71  

    Introduction to Structural Connectivity

    Author:Maxime Descoteaux  

    Institution:Université de Sherbrooke  

    Session Type:Weekend Course  

    Session Date:Sunday, 12 May 2019  

    Session Time:13:30  

    Session Name:Brain Connectivity: Structure & Function  

    Program Number:

    Presentation Time:14:20   

    Room Number:Room 710A  

    Computer Number:

    Metrics that Matter: Improved statistical power to detect differences in tissue microstructure through dimensionality reduction

    Needle in a Haystack: Finding connections of interest in the precentral gyrus from diffusion MRI based connectomics

    Author:Jasmeen Sidhu  Francois Rheault  Maxime Descoteaux  

    Institution:Université de Sherbrooke  

    Session Type:Digital Poster  

    Session Date:Wednesday, 15 May 2019  

    Session Time:09:15  

    Session Name:Microstructure Modeling: 2  

    Program Number:3617  

    Presentation Time:09:15   

    Room Number:Exhibition Hall  

    Computer Number:Computer 111  

    On the intrahemispheric connectivity of the monkey: a diffusion tractography and tract tracing analysis

    Author:Gabriel Girard  Roberto Caminiti  Alexandra Battaglia-Mayer  Etienne St-Onge  Karen Ambrosen  Simon Eskildsen  Kristine Krug  Tim Dyrby  Maxime Descoteaux  Giorgio Innocenti  Jean-Philippe Thiran  

    Institution:Center of Functionally Integrative Neuroscience, Department of Clinical Medicine, Aarhus University  Danish Research Centre for Magnetic Resonance, Center for Functional and Diagnostic Imaging and Research, Copenhagen University Hospital Hvidovre  Department of Applied Mathematics and Computer Science, Technical University of Denmark  Department of Neuroscience, Karolinska Institutet  Department of Physiology and Pharmacology, University of Rome SAPIENZA  Department of Physiology, Anatomy and Genetics, University of Oxford  Radiology Department, Centre Hospitalier Universitaire Vaudois and University of Lausanne  Sherbrooke Connectivity Imaging Lab, Computer Science Department, Université de Sherbrooke  Signal Processing Lab (LTS5), École Polytechnique Fédérale de Lausanne  Brain and Mind Institute, École Polytechnique Fédérale de Lausanne  Department of Anatomy, Histology, Forensic Medicine, and Orthopedics, University of Rome SAPIENZA  Department of Applied Mathematics an Computer Science, Technical University of Denmark  

    Session Type:Oral  

    Session Date:Monday, 13 May 2019  

    Session Time:13:45  

    Session Name:Fiber Orientations & Tractography  

    Program Number:0166  

    Presentation Time:14:33   

    Room Number:Room 511BCEF  

    Computer Number:

    Reducing false-positive connections using hierarchical microstructure-informed tractography

    Towards a deep learning model for diffusion-aware tractogram filtering

    Author:Daniel Jörgens  Philippe Poulin  Rodrigo Moreno  Pierre-Marc Jodoin  Maxime Descoteaux  

    Institution:KTH Royal Institute of Technology  Université de Sherbrooke  

    Session Type:Digital Poster  

    Session Date:Wednesday, 15 May 2019  

    Session Time:08:15  

    Session Name:Diffusion MRI: Fiber Orientations & Tracking  

    Program Number:3375  

    Presentation Time:08:15   

    Room Number:Exhibition Hall  

    Computer Number:Computer 37  

    Towards Validating Structural Connectivity in the Human Language System: an Intraoperative Cortico-Cortical Stimulation Experiment

    Tractostorm: Evaluation of intra and inter rater reproducibility in tractography dissection

    Author:Francois Rheault  Laurent Petit  Maxime Descoteaux  

    Institution:Université de Bordeaux  Université de Sherbrooke  

    Session Type:Digital Poster  

    Session Date:Wednesday, 15 May 2019  

    Session Time:08:15  

    Session Name:Diffusion MRI: Fiber Orientations & Tracking  

    Program Number:3376  

    Presentation Time:08:15   

    Room Number:Exhibition Hall  

    Computer Number:Computer 38