Zhiqing Yin1, Xinzhou Li2, Madison E. Kretzler3, Mark Griswold1,3, Yong Chen3, and Rasim Boyacioglu3
1Biomedical Engineering, Case Western Reserve University, Cleveland, OH, United States, 2Siemens Medical Solution, USA, St. Louis, MO, United States, 3Radiology, Case Western Reserve University, Cleveland, OH, United States
Synopsis
Keywords: Motion Correction, Motion Correction
Motivation: Respiratory monitoring is critical for robust free-breathing MRI and various methods have been developed.
Goal(s): To leverage sliding-window MRF to evaluate the accuracy of respiratory motion assessment obtained from the Pilot Tone (PT) navigator and BioMatrix Sensor and apply to free-breathing abdominal MRF.
Approach: Sliding-window MRF was used to measure respiratory motion with a temporal resolution of 0.5 sec to compare with the respiratory motions acquired using PT navigator and BioMatrix Sensor during in vivo scans.
Results: PT navigator presents slight improvement in monitoring respiratory motion, but MRF maps reconstructed based on the motion waveforms from all these approaches are consistent in quality.
Impact: The knowledge
obtained in this study will help design free-breathing abdominal imaging in
general and provide critical information in performing quantitative abdominal
MRI using MRF.
Introduction
The Pilot Tone (PT) navigator is a
relatively new motion monitoring method developed for cardiac and abdominal MR
imaging (1). PT transmits a constant radiofrequency
signal into the scanner environment to encode physiological motion. Previously
we have shown that PT navigators enable free-breathing abdominal MR
Fingerprinting (MRF) for both 2D and 3D acquisitions (2). Additionally,
respiratory signals can also be extracted directly from the BioMatrix Sensors
embedded in the scanner table. The accuracy of respiratory motion measurement
between these two approaches has not been extensively evaluated. In this pilot
study, we aim to 1) assess the measurement accuracy of the two methods using the
body motion waveforms extracted from the sliding-window MRF (SW-MRF) reconstruction;
and 2) evaluate their utility towards free-breathing abdominal MRF.Methods
MRI experiments were performed with one normal volunteer on a 3T Siemens
scanner (MAGNETOM Vida, Siemens Healthineers, Erlangen, Germany). The subject
was instructed to perform normal breathing during the scanning. 2D MRF
acquisitions based on the FISP readout were acquired with both the integrated Beat
Sensor PT signals and BioMatrix Sensor respiratory signals (Siemens Healthineers)
collected simultaneously with the scanner (3-4). The MRF acquisition parameters
included: FOV, 45×45 cm2;
matrix, 288×288; slice thickness, 5 mm; FA, 1-60°; TR, 10.5 ms.
Highly-undersampled spiral readout was applied (R=48) and a total of 1728 MRF
time points were acquired in one repetition of 18 sec. A total of 10
repetitions were acquired with 2 sec waiting time between the repetitions. NUFFT
of the MRF data for each time frame was first performed offline in MATLAB (version
R2023a; Mathworks, Natick, MA). Sliding-window reconstruction (5) using three
different numbers of time frames (24, 48, and 96) was then performed to
determine an optimal number of time frames to be combined for motion
estimation. Based on the yielded image quality and effective temporal
resolution (Fig 1), we selected 48 time frames for analysis corresponding to 0.5
sec temporal resolution. Based on the sliding-window reconstructed images, automatic
edge detection around the liver dome was performed to measure the respiratory
motion (Fig 2). A low-pass filter was first applied to eliminate unwanted noise
followed by edge detection with a built-in MATLAB function by looking for local
maxima of the gradient of the image (MATLAB R2023a). Due to the low flip angles
applied in the MRF acquisition, a small number of SW-MRF images (~5%) do not
present sufficient quality for robust liver edge detection. Working off the
assumption that very minor respiratory motions are expected to occur in a few
TRs (less than 0.1 sec), interpolation using estimated values from neighboring
time frames was applied to estimate the respiratory motion in these cases.
Respiratory motion from the BioMatrix Sensor was output from the scanner
during the measurement. The PT data was processed with the vendor provided
custom processing pipeline. PT data embedded in the raw data was first
extracted followed by DC component and RF interference removal, respiratory
waveform extraction, and low-pass filtering. To evaluate the accuracy of motion
monitoring for the PT navigator and BioMatrix Sensor, correlation coefficients
were calculated for each repetition using the results from the SW-MRF as the gold-standard.
In addition, the utility of these motion waveforms in selecting and binning
time frames for free-breathing MRF was also evaluated. MRF T1 and T2
maps at end-inhalation were obtained using 1/3 of data as described in (2).Results
Fig 3 shows representative correlation curves for three repetitions out
of a total of 10 repetitions. The mean correlation coefficient between PT and
SW-MRF was 0.984±0.005, slightly better than the value obtained between the
BioMatrix Sensor and SW-MRF (0.978±0.017; P>0.05).
However, the PT navigator yielded lower standard deviation, indicating higher
robustness across the measurements. Fig
4 shows the reconstructed MRF T1 and T2 maps based on the
three different motion extraction schemes, with minimal visual differences in
all extracted quantitative tissue property maps.Discussion and Conclusion
In this study,
we compared the measurement accuracy of PT navigators and BioMatrix Sensor for
respiratory motion monitoring. With the results from SW-MRF as the ground truth,
PT navigators exhibit slight improvement in both accuracy and robustness in motion
estimation. However, no significant difference was noticed in the MRF maps
derived from these two respiratory measurement methods. This is partly due to improved
motion tolerance of the MRF technique as compared to conventional MR imaging
methods (2). While this study examined the condition with regular respiratory patterns,
future work will be conducted on irregular motion patterns to fully examine
these approaches.Acknowledgements
Siemens Healthineers and NIH grants 1R01 CA266702, and 1R01 CA282516.References
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