Mengke Liu1, Yuchi Tian2, Xingpeng Li1, Yimeng Zhang1, Jixue Feng1, Xiaoyun Liang2, and Rengui Wang1
1Department of Radiology, Beijing Shijitan Hospital, Capital Medical University, Beijing, China, Beijing, China, 2Institute of Research and Clinical Innovations, Neusoft Medical Systems Co., Ltd, Shanghai, China
Synopsis
Keywords: Diagnosis/Prediction, Machine Learning/Artificial Intelligence, Primary lower extremity lymphedema
Motivation: Traditional imaging-based staging methods for PLEL rely on subjective assessments by medical professionals and often struggle to capture the micro-level changes associated with lymphedema, which limits the accuracy and granularity of staging.
Goal(s): To explore the value of radiomicss features based on different components extracted from MRI for assessing the staging of PLEL.
Approach: We proposed a machine learning model to integrate multi-region radiomics for automated PLEL staging and employed deep learning for automated subcutaneous tissue segmentation in the lower extremity MRI.
Results: The Dice coefficient for subcutaneous tissue segmentation scored 0.92, and the AUC for lymphedema staging was 0.821.
Impact: The machine learning model based on radiomics in this
study shows promising potential and value in lymphedema staging, which is
expected to reduce subjective variability and potentially eliminate the need
for clinical assays, thus enhancing its clinical applicability.
Background or purpose
Primary
lower extremity lymphedema (PLEL) is a chronic progressive swelling of the
limbs due to congenital disruption or impairment of lymphatic reflux, excessive
accumulation of lymphatic fluid in the subcutaneous soft tissues of the limbs,
lipohypertrophy and fibrous connective tissue hyperplasia 1,2. For
clinical staging of ISL in PLEL, accurate assessment of subcutaneous tissue
edema infiltration and fat deposition is critical, and understanding the fluid
and fat composition of patients may help determine the most appropriate
clinical treatment for the patients 3,4. Previous studies have
evaluated the favorable site and the distribution pattern of the hydrolipidic
component of lymphedema and the correlations between hydrolipid content and
clinical staging 5. However, conventional MRI characteristics are mostly
morphologic and those functional features visible to the naked eye does not
allow extraction of microscopic heterogeneity of the lesion area. Therefore, we
sought to explore whether more diagnostic imaging information could be obtained
to assess PLEL severity with the proposed method.Materials and Methods
Subjects:
This retrospective study included 112 patients with unilateral primary lower
extremity lymphedema diagnosed using lymphoscintigraphy. The patients were
classified into two stages based on the International Society of Lymphology
(ISL) clinical staging criteria by two experienced radiologists with ten years
of experience. The dataset was divided into a training set of 78 patients and a
test set of 34 patients.
Algorithm:
In
the process of developing the lymphedema staging model (see Figure 1), we
initiated with the automated segmentation of subcutaneous tissue's region of
interest (ROI) using a 3D-Unet. Subsequently, thresholds were applied to
extract the constituents of the four subcutaneous tissues. We employed PyRadiomics
6 to extract an extensive set of 1236 radiomics
features from each constituent, encompassing four major categories:
morphological, first-order statistical, textural, and filtering features. Following
feature extraction, rigorous feature selection was performed as well. Firstly,
low-variance features, indicative of noise, were removed to enhance data
quality. The feature matrix was then centralized and standardized for
comparability. Dimensionality reduction was implemented using Spearman
correlation coefficient analysis to eliminate features with correlations
exceeding a threshold of 0.8 7, reducing redundant information,
which resulted in the selection of the top 20 relevant features. Furthermore,
we employed Lasso regression with 10-fold cross-validation to identify the
optimal alpha value, in which the Lasso model was trained to retain the 12 most
influential features for subsequent classification tasks. To address class
imbalance, we used the Synthetic Minority Over-sampling Technique (SMOTE) to
oversample the training dataset and rectify class distribution. Subsequently, a
logistic regression model was constructed and fitted it with the
SMOTE-preprocessed training data. The model was iteratively trained with a
maximum of 1000 iterations to ensure optimal performance and convergence. The 3D-Unet segmentation
model was trained with a batch size of 8 and for 500 epochs with the weighted
Dice coefficient loss as the loss function and the Adam optimizer with an
initial learning rate of 5e-4.
Statistical
analysis: The
evaluation metrics used include the Dice coefficient for segmentation
performance, as well as Receiver Operating Characteristic (ROC) analysis, AUC,
accuracy, precision, recall, and F1 score for classification performance
assessment.Results
The
Dice coefficient for the automated segmentation of subcutaneous tissue was
0.92. The values of AUC were 0.774, 0.807, 0.782, and 0.751 for the staging
model utilizing only fat component features, adipose space edema, hydrops, and the
fat-water-mix, respectively. Notably,
the model incorporating features from all four tissue components exhibited the
most favorable performance in terms of both AUC (0.821) and ROC evaluation (see
Table 1 & Figure 2).Discussion
In
the individual component-based staging models, the model utilizing radiomics
features derived from Adipose space edema exhibits the best staging performance
with an AUC of 0.807. In contrast, the combined staging model, incorporating radiomics
features from all the four components, outperforms the individual
component-based models, achieving an improved AUC of 0.821. This suggests that
the integration of radiomics features from multiple tissue components could provide
valuable assistance in staging. The mixed model comprises a total of 13
features (see Figure 3), incorporating four different components: Fat-only,
Adipose space edema, Hydrops, and Fat-water-mix. Specifically, Fat-only,
Adipose space edema, Hydrops, and Fat-water-mix, containing 4, 3, 1, and 4
features, respectively. Notably,
"Fat-only-original_glszm_ZoneEntropy" and
"Fat-only-log-sigma-2-0-mm-3D_glcm_MCC" exhibit the most significant positive
impact on staging, while
"Fat-water-mix-wavelet-HHL_firstorder_Maximum" has the most
pronounced negative impact. The experimental results confirm the effectiveness
of the fusion model and its potential clinical values in assisting lymphedema
staging. Future work will further explore the staging value by using multi-parametric
MRI for lymphedema.Acknowledgements
No acknowledgement found.References
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