Zekang Ding1,2, Huajun She1, and Yiping P. Du1
1School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China, 2Central Research Institute, United Imaging Healthcare, Shanghai, China
Synopsis
Keywords: New Trajectories & Spatial Encoding Methods, Data Acquisition, Interleaved acquisition, Ringing artifacts
Motivation: In 3D radial ultra-short TE based dynamic pulmonary MRI, 3D radial k-space is usually segmented into multiple interleaves for interleaved acquisition. Motion-resolved k-space data are obtained subsequently by retrospectively binning using respiratory signals. Diaphragm drifting has been commonly observed during the scan, resulting in non-uniform spherical distribution of sampling density in motion-resolved k-space and ringing artifacts in reconstructed images.
Goal(s): To reduce ringing artifacts in motion-resolved images.
Approach: A golden-step based interleaving approach is proposed to mitigate adversary effect of diaphragm drifting.
Results: Ringing artifacts in dynamic images acquired with conventional interleaving approach are significantly reduced in that acquired with proposed interleaving approach.
Impact: Using golden-step
based interleaving approach, uniform motion-resolved k-spaces can be obtained even
under severe diaphragm drifting. This proposed approach has potential to reduce
ringing artifacts in other non-Cartesian acquisitions and applications, such as
bSSFP-based free-breathing cardiac MRI and real-time MRI.
Introduction
In
3D radial ultra-short TE (UTE) based dynamic pulmonary MRI, 3D radial k-space
with spiral phyllotaxis pattern is commonly segmented into
multiple interleaves in data acquisition.1,2 Dynamic motion-resolved images can be reconstructed from the
motion-resolved k-space data obtained by retrospectively binning using the
respiratory signals. However, in the presence of severe diaphragm drifting,3 non-uniform
distribution of motion-resolved k-space data, usually manifests as local or
regular holes in k-space, may lead to streaking and ringing artifacts in the
final reconstructed images.4
In this study, we
propose a new golden-step based interleaving approach for spiral phyllotaxis
pattern to reduce ringing artifacts induced by diaphragm drifting. Using this approach, the first spoke
of successive interleaves are arranged incoherently with golden step rather
than sequentially along polar direction. The proposed golden-step based
interleaving approach is compared with conventional sequential interleaving
approach by combining these two approaches with a UTE sequence. The imaging
performance of these two approaches are evaluated on phantom and healthy
subjects.Methods
The formulation of
half-echo spiral phyllotaxis pattern in 3D spherical coordinates is:5
$$\varphi_{n}=\frac{2\pi}{360}\cdot{n}\cdot\varphi_{gold},$$
$$\theta_{n}=\left\{\begin{matrix}{\frac{\pi}{2}\cdot\sqrt{\frac{2n}{N}},~~~~~~~~~~~~~~~~1\leq{n}\leq\frac{N}{2}}\\{\pi-\frac{\pi}{2}\cdot\sqrt{\frac{2(N-n)}{N}},\frac{N}{2}\leq{n}\leq{N}}\end{matrix}\right..$$
Here,
$$${n}$$$ is the spoke
index whose value is from 1 to $$${N}$$$
.$$$\varphi_{n}$$$ is the azimuthal angle of the $$${n}$$$th spoke. Golden angle $$$\varphi_{gold}=137.51{^\circ}$$$
.$$$\theta_{n}$$$ is the polar
angle of the $$${n}$$$th spoke.
In interleaved acquisition, $$$N = I\cdot{S}$$$ spokes are
straightforwardly segmented into $$$I$$$ interleaves
with $$$S$$$ spokes per
interleaf. Every $$$I$$$th spoke is arranged into the same interleaf. Using
conventional sequential interleaving approach, the spoke index $$${n}$$$ belonging to
the $$${i}$$$th interleaf can be expressed as:
$$n=i+I\cdot{s},~~~~s=0,~1,~2\cdots(S-1).$$
However,
in golden-step based interleaving approach, the spoke index belonging to the $$${i}$$$th interleaf are:
$$n=GoldenStep(i)+I\cdot{s},~~~~s=0,~1,~2\cdots(S-1).$$
In
which $$$GoldenStep$$$ is calculated
based on golden ratio:6
$$GoldenStepNonInterger(i)=mod\left({\frac{I}{GR}\cdot{i},~I}\right),~~~~i=1,~2,~3\cdots{I},$$
$$GoldenStep=sortIndex\left(sortIndex(GoldenStepNonInterger)\right).$$
Here,
$$$mod\left({a,b}\right)$$$ outputs the
remainder of $$$a$$$ with respect to
$$$b$$$. Golden ratio $$$GR$$$ equals to
1.618. Sorting operator $$$sortIndex\left({array}\right)$$$ outputs the
arrangement indices of $$$array$$$ in ascending
order. Figure 1 illustrates an example of two interleaving approaches with $$$I=6$$$ and $$$S=10$$$.
A superior-inferior (SI) navigated UTE
sequence1 was combined with
sequential and golden-step based interleaving approaches separately for data
acquisition. A resolution phantom and 4 healthy subjects were scanned on a 3T MRI
scanner (uMR790; UIH, Shanghai, China). The scan parameters were: FOV = 320$$$\times$$$320$$$\times$$$320 mm3, isotropic resolution = 1 mm, TE =
60 $$$\mu$$$s, TR = 3 ms, flip angle = 4$$${^\circ}$$$, and the scan time for each interleaving approach was 10.5
minutes including 4000 interleaves with one SI navigator and 50 imaging spokes
each.
In motion-resolved
reconstruction, five motion-resolved k-spaces were obtained by binning all
interleaves into different motion states from end-expiration (EE) to
end-inspiration (EI). Dynamic images were reconstructed by performing nonuniform
FFT on the motion-resolved k-space data. In order to investigate
the uniformity of
spherical distribution of sampling density in 3D radial k-space, the 3D
sphere was divided into 364 regions with approximately equal areas using the
method of equal-solid-angle.7 The number of the spoke endpoints
within each equal-solid-angle region was counted for the motion-resolved
k-spaces.Results
The respiratory
curve influenced by diaphragm drifting during a sequential interleaved scanning
of a typical subject is shown in Figure 2. The spherical distribution of
sampling density of the motion-resolved k-spaces obtained by retrospectively
binning based on this respiratory curve are illustrated in Figure 3 both in
north-pole and south-pole views. In golden-step based
approach, the number of endpoints at the north and south poles keep
approximately the same in all respiratory states compared to that of
end-expiratory and end-inspiratory states in sequential approach.
Figure 4 shows the
images of a typical subject (A) and the phantom (B). In the presence of severe diaphragm
drifting, ringing artifacts were observed in the images at end-expiratory
and end-inspiratory states using sequential approach as indicated by the red
arrows. These ringing artifacts were substantially reduced in the images using golden-step based approach
for all respiratory states. Motion-resolved images of all 4 subjects are
illustrated in Figure 5. Ringing artifacts were observed in the images acquired with sequential
approach, indicated by the red arrows. These ringing artifacts were greatly reduced in the images acquired using the proposed golden-step based approach.Conclusion
A new
golden-step based interleaving approach is proposed to obtain uniform
distribution of motion-resolved k-spaces in dynamic pulmonary MRI. In the presence of severe diaphragm drifting, ringing artifacts observed in dynamic images
acquired with sequential approach were significantly reduced in that acquired
with the proposed interleaving approach. The proposed approach has potential to reduce ringing artifacts in other non-Cartesian k-space acquisitions,
such as bSSFP-based free-breathing cardiac MRI and real-time MRI.Acknowledgements
This
study is supported by the National Key Research and Development Program (2016YFC0103905),
the National Natural Science Foundation of China (81627901), and the Shanghai
Science and Technology Commission Explorer Program (22TS1400300). This study is
also supported in part by an internship granted by the United Imaging
Healthcare (Z.D.).References
1. Ding Z, Cheng Z, She H, Liu B, Yin Y, Du YP. Dynamic pulmonary MRI
using motion-state weighted motion-compensation (MostMoCo) reconstruction with
ultrashort TE: A structural and functional study. Magn Reson Med
2022;88(1):224-238.
2. Feng L, Delacoste
J, Smith D, Weissbrot J, Flagg E, Moore WH, Girvin F, Raad R, Bhattacharji P,
Stoffel D, Piccini D, Stuber M, Sodickson DK, Otazo R, Chandarana H.
Simultaneous Evaluation of Lung Anatomy and Ventilation Using 4D
Respiratory-Motion-Resolved Ultrashort Echo Time Sparse MRI. J Magn Reson
Imaging 2019;49(2):411-422.
3. Taylor AM, Jhooti
P, Firmin DN, Pennell DJ. Automated monitoring of diaphragm end-expiratory
position for real-time navigator echo MR coronary angiography. J Magn Reson
Imaging 1999;9(3):395-401.
4. Park J, Shin T,
Yoon SH, Goo JM, Park JY. A radial sampling strategy for uniform k-space
coverage with retrospective respiratory gating in 3D ultrashort-echo-time lung
imaging. NMR Biomed 2016;29(5):576-587.
5. Piccini D,
Littmann A, Nielles-Vallespin S, Zenge MO. Spiral phyllotaxis: the natural way
to construct a 3D radial trajectory in MRI. Magn Reson Med
2011;66(4):1049-1056.
6. Feng L.
Golden-Angle Radial MRI: Basics, Advances, and Applications. J Magn Reson
Imaging 2022;56(1):45-62.
7. Glover GH, Pauly
JM, Bradshaw KM. Boron-11 imaging with a three-dimensional reconstruction
method. Journal of Magnetic Resonance Imaging 1992;2(1):47-52.