Keywords: Segmentation, Segmentation, Dementia, Alzheimer's disease, Brain, White matter, Neuro
Motivation: Evaluating cognitive function-related white matter lesions (WML) conventionally requires 3D fluid attenuated inversion recovery (3D-FLAIR), which isn't always available. We aimed to explore the suitability of routinely acquired 3D-T1 weighted images (3D-T1WI) for WML assessment.
Goal(s): This study investigated whether 3D-T1WI could replace 3D-FLAIR in WML assessment.
Approach: We compared the correlation coefficient, ICC, and DSC of WML volume between 3D-FLAIR and 3D-T1WI, as well as its correlation with cognitive scores.
Results: WML based on 3D-T1WI strongly correlated with WML based on 3D-FLAIR, with high ICC, DSC, and cognitive score associations, indicating the potential of 3D-T1WI for WML assessment alternative to 3D-FLAIR.
Impact: White matter lesions (WML) based on 3D-T1 weighted images (3D-T1WI) closely matched 3D-fluid attenuated inversion recovery (3D-FLAIR) in WML area, volume, and cognitive function associations. It is suggested 3D-T1WI is valuable alternative to 3D-FLAIR for WML volume assessment.
This research was supported by Brain/MINDS Beyond program (grant no. JP18dm0307006, JP18dm0307001, JP18dm0307004, JP18dm0307008, JP19dm0207069, JP19dm0307101, and JP22dm0307002) of the Japan Agency for Medical Research and Development (AMED), AMED under grant number JP21wm0425006, JSPS KAKENHI (grant nos. 20K16737, 21K07690, 21K12153, 21K15833, 22H04926, 23H02865), a Grant- in-Aid for Special Research in Subsidies for ordinary expenses of private schools from The Promotion and Mutual Aid Corporation for Private Schools of Japan, and the Juntendo Research Branding Project. This study was also supported by the World Premier International-International Research Center for Neurointelligence [9] (WPI-IRCN) and Japan Science and Technology Agency (JST) Moonshot R&D Grant Number JPMJMS2021.
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Figure 1. An example of FLAIR (a), 3D-T1WI image (b) and comparison of WML from each segmentation (c)-(e)
An example of 3D-FLAIR(a), 3D-T1WI(b) is shown. While WML on FLAIR has high signal intensity than surrounding white matter, WML on 3D-T1WI has lower signal intensity. (c)-(e) illustrate WML segmented in each way on FLAIR image. (c) represents WML using LST (color: yellow). In (d), WML using FreeSurfer (color: blue) is overlaied on top of WML using LST (color: yellow). Likewise, in (c), WML using CAT12 (color: red) is overlaied on top of WML using LST (color: yellow).
Figure 2. The correlation of WML volume between FLAIR and 3D-T1WI
The graphs show the associations between WML volumes based on 3D-FLAIR (i.e., LST) and 3D-T1WI (i.e., FreeSurfer and CAT12). The blue area indicates 95% CIs and green dotted line means the line of y = x. The correlation coefficient is 0.94 (p < 0.001) for both FreeSurfer and CAT12. Moreover, ICC (2,1) was 0.73 (p < 0.001) for FreeSurfer and 0.92 (p < 0.001) for CAT12, respectively.Figure 3. Dice coefficient distribution between WML based on FLAIR and WML based on 3D-T1WI
This graph shows a variability of Dice coefficient between WML based on FLAIR and WML based on 3D-T1WI. Also, Dice coefficient distribution were shown as WML volume based on FLAIR were divided into 0∼5 [mL], 5∼10 [mL] and 10 [mL]∼.
Figure 4. The correlation between WML volume and cognitive scores
The heat map shows Spearman’s correlation coefficient between WML volume and cognitive score. (a) The correlation between WML volume and each cognitive scores in cross-sectional data (i.e, baseline). (b) The correlation between WML volume change and cognitive score change for 1 year in longitudinal data (i.e., 1 years later - baseline).
Figure 5. The difference of Fisher’s z of Spearman rank correlation coefficient between 3D-FLAIR and 3D-T1WI
The graphs show the difference namely |ΔFisher’s z |, of the Fisher z transformed Spearman’s partial correlation coefficient of cognitive scores and WML volume between 3D-FLAIR (i.e., LST) and 3D-T1WI (i.e., FreeSurfer and CAT12) for cross-sectional data (i.e, baseline) (a) and longitudinal data (i.e,. 1 years later - baseline) (b)