Ana I Silva1, James M Joers1, Katherine Gundry1, Alfredo Lorente1, Jeromy Thotland1, Dinesh K Deelchand1, Young W Park1, Xiufeng Li1, Georgios E Manousakis2, Abby I Metzler2, Christophe Lenglet1, Lynn Eberly1,3, June C Kendall4, Michel Toledano4, Orhun H Kantarci4, Merve Atik4, Matthew L Senjem4, Burcu Zeydan4, Keenan C Byrne5, Meher R Juttukonda5,6, David H Salat5, Janet C Sherman5, Lauren Pollak5, Shibani Mukerji5, G Kyle Harrold5, Sevil Yasar7, Mehreen Nabi7, Sana Rehman7, Christof Karmonik8, Syed A Gillani8, Valerie Flores8, Rachel Davis8, Tetsuo Ashizawa8, Peter B Barker7, Eva M Ratai5, Kejal Kantarci4, and Gülin Öz1
1Center for Magnetic Resonance Research, Department of Radiology, University of Minnesota, Minneapolis, MN, United States, 2Department of Neurology, University of Minnesota, Minneapolis, MN, United States, 3School of Public Health, Division of Biostatistics, University of Minnesota, Minneapolis, MN, United States, 4Mayo Clinic, Rochester, MN, United States, 5Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Boston, MA, United States, 6Department of Radiology, Harvard Medical School, Boston, MA, United States, 7Johns Hopkins University, Baltimore, MD, United States, 8The Houston Methodist Research Institute, Houston, TX, United States
Synopsis
Keywords: Infectious Disease, COVID-19, Arterial Spin labelling, Brain, Brain Connectivity, Diffusion Tensor Imaging, Microstructure, Multimodal, Spectroscopy, Perfusion
Motivation: There is an urgent need to understand the biological basis of long-COVID.
Goal(s): To elucidate long-term consequences of SARS-CoV-2 infection in the brain using advanced MRI.
Approach: In a multisite study, we collected single-voxel MRS, diffusion MRI, pCASL and T2 FLAIR MRI, to investigate the neurochemistry, microstructure, perfusion, and white matter hyperintensities (WMH) in participants suffering from long-COVID.
Results: Participants with long-COVID have long-lasting effects (that persist years after acute infection) in the neurochemistry, microstructure, and perfusion, primarily in the brainstem, midbrain and diencephalon, and their connecting tracts, without the presence of overt white matter pathology.
Impact: Multi-modal
advanced MRI demonstrates long-lasting effects of COVID-19 in the brain,
including neurochemical and microstructural abnormalities and perfusion
deficits. These insights may facilitate the treatment and care of people
suffering from long-COVID.
Introduction
Long-COVID is characterized by long-term health problems
persisting or appearing after acute SARS-CoV-2 infection. Neurological and
cognitive symptoms are frequently reported by patients with long-COVID.
Approximately 10% of patients experience long-COVID after acute infection, with
no current treatment1. Defining the biological
basis of these symptoms is critical to develop interventions and appropriate
care to individuals suffering from long-COVID. In this multisite study, we aim
to better understand the long-term consequences of SARS-CoV-2 infection in the brain
using advanced MRI.Methods
Harmonized methods were used to collect multimodal MR data
across 5 sites. Here, we present interim cross-sectional analyses from
single-voxel MRS, diffusion MRI, pseudocontinuous arterial spin labeling (pCASL)
and T2 FLAIR.
Participants with long-COVID were enrolled if they had
neurological sequelae in the 6 months after a confirmed SARS-CoV-2 infection
and continued to show at least one neurological symptom. Participants were
scanned on average 596 (± 298) days post-infection. Control participants were
enrolled if they had no prior COVID-19 symptoms and diagnosis (Figure 1).
MR data were acquired on SIEMENS Prisma 3T scanners. 1H-MRS
data were obtained from the pons (16x16x16 mm3) and bilateral thalamus
(21(AP)x36(LR)x14(FH) mm3), using a short-echo semi-LASER protocol2. Spectra were corrected for frequency,
phase and eddy-current errors using MRspa3 before quantification in
LCModel with simulated basis set. Diffusion and pCASL acquisition parameters
and processing were based on the Human Connectome Protocol (HCP)4,5.
Fractional anisotropy (FA), axial-, radial-, and mean
diffusivity (AD, RD, and MD, respectively) values were calculated using DTIFIT
(FSL). TBSS (FSL) was used for voxel-wise permutation analysis of DTI maps. The
randomize function was used with TFCE6, generating cluster-size
statistics based on 5000 permutations. Mean regional FA, AD, RD, and MD values
were further extracted in the native space, using an atlas-based segmentation
(JHU white matter atlas) as previously described7. Cerebral blood flow (CBF)
and arterial transit time (ATT) were calculated from pCASL data5, using tissue masks based on T1-weighted
images processed with FreeSurfer. White matter hyperintensity (WMH) volumes
were derived from a semi-automated segmentation of FLAIR images8, normalized to intracranial
volume.
ANOVA, followed by Tukey’s post-hoc tests, were used to
compare each long-COVID group (hospitalized or non-hospitalized during acute
infection) to controls, while accounting for age and sex differences.Results
This report included 110 participants, of which 63 suffered
from long-COVID (n=56 non-hospitalized and n=7 hospitalized) and 47 were
controls (Figure 1). Participants with long-COVID were older than controls
(non-hospitalized p=0.01, hospitalized p<0.001).
Hospitalized participants with long-COVID showed
neurochemical differences in the pons and thalamus. Specifically, they had
higher Glucose+Taurine (Glc+Tau) in the pons and lower glutathione (GSH), total
creatine (tCr) and total N-acetylaspartate (tNAA) in the thalamus, than
controls (Figure 2).
Non-hospitalized participants with long-COVID had lower AD
and MD in the cerebral peduncle and in both the anterior and posterior limbs of
the internal capsule (Figure 3).
Non-hospitalized participants with long-COVID had lower CBF in
the choroid-plexus and trends for lower CBF in the brainstem, and higher ATT in
the cerebellum and trends for higher ATT in the brainstem and hippocampus
(Figure 4).
No group differences were found in WMH volumes
(Figure 5).Discussion
These findings suggest that long-COVID is associated with
alterations in neurochemistry of the pons and thalamus, microstructural damage
in tracts that connect the cerebrum to the brainstem/pons and perfusion
deficits primarily in infratentorial structures that persist up to 2 years
post-infection.
Lower tNAA and GSH in hospitalized cases indicate neuronal
dysfunction and oxidative stress in the thalamus. Lower GSH is consistent with
a prior long-COVID report from frontal gray matter9. Higher Glc+Tau in the
brainstem points to energy deficits, either due to COVID-19-related
hyperglycemia10 or lower glucose utilization.
Lower AD and MD have also been previously reported in
participants with long-COVID, specifically in the corpus callosum, forceps
minor, middle longitudinal fasciculus, uncinate tract and fronto-occipital
fasciculus11. These findings in
diffusivity could indicate axonal damage, reduced brain perfusion, and/or
hypoxia11,12.
Lower
CBF and higher ATT in
infratentorial structures could be associated with lower AD and MD observed in
the cerebral peduncle, a tract that connects the brainstem to the cerebrum.
Further analyses will elucidate on how these measures relate.Conclusion
By combining advanced multi-modal MRI, this study revealed
neurochemical, microstructural and perfusion deficits primarily in the brainstem,
midbrain, diencephalon, and their connecting tracts in participants with
long-COVID. These diffusion (lower diffusivity), perfusion (lower CBF, higher
ATT) and functional (lower tNAA, GSH) deficits were observed in the absence of increases
in WMH. Future work will focus on age-matching the cohorts and investigating
how imaging measures relate to observed clinical phenotypes and symptom
severity.Acknowledgements
R01NS124065, R01NS124065-02S1,
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