Jinglei Lv1, Mac Shine1, Fei Kong1, and Fernando Calamante1
1The University of Sydney, Camperdown, Australia
Synopsis
Keywords: White Matter, Brain Connectivity, White matter; Diffusion MRI; Functional MRI; Multi-modal
Motivation: The axonal connections in white matter(WM) are vital for brain function, but there is a knowledge gap of the functional role of WM tracks.
Goal(s): To address this, we proposed a method to combine diffusion MRI (dMRI) and functional MRI (fMRI) to map the functional role of WM tracks during tasks.
Approach: To each WM track generated with dMRI, we define the dynamic functional connectivity (DFC) that reflects the functional interaction of the GM it connects. General linear model(GLM) is then employed to measure the activation level during task.
Results: Meaningful tracks that are associated with various tasks, implicating the activated networks.
Impact: Our method paves the road to generate a functional atlas of
white matter. It is important for understanding
the functional architecture of the brain, the mechanism of brain disorders,
such as, Schizophrenia, Epilepsy and Traumatic Brain Injury.
Introduction
Vast efforts have been devoted to map the functional role of
grey matter(GM) in the human brain. Although the axonal connections inherent
within white matter(WM) are also vital for brain function, studies rarely map
cognitive functions to WM. In this work, we proposed a method to combine
diffusion MRI (dMRI) and functional MRI (fMRI) to map the functional role of WM
tracks during fMRI tasks. Specifically, to each WM track generated with dMRI, we
assign the dynamic functional connectivity (DFC) that reflects the functional
interaction of the GM it connects. General linear model(GLM) is then employed
to measure the activation level of the DFCs[1] against the task design. A major challenge
for group-wise analysis is the correspondence of the tracts across subjects.
Our recently developed multimodal tissue-unbiased tractogram template[2] addressed this problem, and group-wise activation
can now be inferred based on the template. We tested our method using the human
connectome project (HCP) dataset[3], and our results have shown meaningful tracks
that are associated with various tasks/contrasts, implicating
the activated networks. Our method will be used to generate a functional atlas
of white matter. Methods
T1, T2, dMRI, and fMRI of randomly selected 50 subjects from
the HCP data set were used in this study. All the modalities were processed
using the HCP minimal preprocessing pipeline[3]. The dMRI tensor model was calculated to
map the Fractional anisotropy (FA) and mean diffusivity (MD). We generated the
tissue unbiased brain template (Fig.1) with multimodal registration[2] with T1, T2, FA and MD maps. The
registration is applied to the fiber orientation distribution (FOD)[4] of 50 subjects, to generate the FOD
template[2]. With the anatomical constrained tractography[5], a tractogram template (with 90k
streamlines, Fig. 1f) was generated, whose tracks end at the GM/WM boundary
(Fig. 1g). This is important for each streamline to be assigned the accurate
fMRI signal at both ends.
The fMRI data was further high-pass filtered (>0.01HZ)
and spatial smoothed (FWHM=6mm) after the minimal preprocessing. Since all the
HCP fMRI data are normalized to the MNI 152 template, we also registered[6] our multimodal template to the MNI space.
For each template track, we extracted the fMRI signals of
the two endpoints and then multiplied the signal intensity at each time point
so as to estimate the dynamic co-fluctuation[7] of the two signals (Fig.1f) – we refer to
this novel time series as the dynamic functional connectivity associated with the
track (Track DFC). In this study, we explore the functional activation of the Track
DFC in the 7 tasks of the HCP, including the Emotion, Language, Gambling, Motor,
Social, Relational and Working Memory (W-Mem) tasks[8]. GLM[9] was employed to determine the effect of the
task design on the Track DFC. As the tractogram template establishes a correspondence
across subjects, the second level mixed-effect model[10] was used to infer the group-wise
activation. Results
We mapped the activation of Track DFC on the tractogram
template as shown in Fig.2. The threshold of z=2.3 (p=0.01) is used to
determine the activation. Our results highlight a diverse set of WM tracks that
are differentially related to specific task contrasts. For example, the motor
activation agrees with the “Homunculus” . In addition, Our method provides more information about the
WM involvement and the connected additional GM regions (Fig.3). This potentially implicates the GM network that is contributing
to the task. We also counted the Track DFC activations in 7 tasks for each streamline and mapped the number in Fig.4. A significant number of tracks are involved in multiple tasks. This indicates the functional heterogeneity of white matter tracks.Conclusions
In summary, we have combined dMRI and fMRI to develop a
novel method to detect WM tracks that are associated to specific cognitive tasks.
Based on our tissue-unbiased tractogram template, we have provided the
statistically sound group-wise inference. Our preliminary analysis of 50 HCP
subjects and the 7 HCP tasks conclude that our method can map the functional
role of WM tracks. In the future, we aim to build up a functional atlas of WM based
on the proposed method.Acknowledgements
Lv is supported by BMC Development Grant, BISA
Flagship Grant, and MEV Schizophrenia program.
Calamante and Lv are supported by the ARC Discovery Project Grant.
References
[1] J. Lv, L. Guo, K. Li, X. Hu, D. Zhu, J. Han, T. Liu, Activated
fibers: fiber-centered activation detection in task-based FMRI, in: Biennial
International Conference on Information Processing in Medical Imaging,
Springer, Berlin, Heidelberg, 2011: pp. 574–587.
[2] J. Lv, R. Zeng, M.P. Ho, A. D’Souza, F.
Calamante, Building a tissue-unbiased brain template of fiber orientation
distribution and tractography with multimodal registration, Magn Reson Med.
(2022) 1–14.
[3] M.F. Glasser, S.N. Sotiropoulos, J.A. Wilson,
T.S. Coalson, B. Fischl, J.L. Andersson, J. Xu, S. Jbabdi, M. Webster, J.R.
Polimeni, D.C. van Essen, M. Jenkinson, The minimal preprocessing pipelines for
the Human Connectome Project, Neuroimage. 80 (2013) 105–124.
https://doi.org/10.1016/j.neuroimage.2013.04.127.
[4] A.W. Anderson, Measurement of fiber
orientation distributions using high angular resolution diffusion imaging, Magn
Reson Med. 54 (2005) 1194–1206. https://doi.org/10.1002/mrm.20667.
[5] R.E. Smith, J.D. Tournier, F. Calamante, A.
Connelly, Anatomically-constrained tractography: Improved diffusion MRI
streamlines tractography through effective use of anatomical information,
Neuroimage. 62 (2012) 1924–1938. https://doi.org/10.1016/j.neuroimage.2012.06.005.
[6] ANTs by stnava, (n.d.).
http://stnava.github.io/ANTs/ (accessed January 9, 2023).
[7] J. Faskowitz, F.Z. Esfahlani, Y. Jo, O.
Sporns, R.F. Betzel, Edge-centric functional network representations of human
cerebral cortex reveal overlapping system-level architecture, Natw. Neurosci.
23 (2020) 1644–1654. https://doi.org/10.1038/s41593-020-00719-y.
[8] D.M. Barch, G.C. Burgess, M.P. Harms, S.E.
Petersen, B.L. Schlaggar, M. Corbetta, M.F. Glasser, S. Curtiss, S. Dixit, C.
Feldt, D. Nolan, E. Bryant, T. Hartley, O. Footer, J.M. Bjork, R. Poldrack, S.
Smith, H. Johansen-Berg, A.Z. Snyder, D.C. van Essen, Function in the human
connectome: Task-fMRI and individual differences in behavior, Neuroimage. 80
(2013) 169–189. https://doi.org/10.1016/J.NEUROIMAGE.2013.05.033.
[9] K.J. Friston, A.P. Holmes, K.J. Worsley, J. ‐P
Poline, C.D. Frith, R.S.J. Frackowiak, Statistical parametric maps in
functional imaging: A general linear approach, Hum Brain Mapp. 2 (1994)
189–210. https://doi.org/10.1002/HBM.460020402.
[10] G. Chen, Z.S. Saad, J.C. Britton, D.S. Pine,
R.W. Cox, Linear mixed-effects modeling approach to FMRI group analysis,
Neuroimage. 73 (2013) 176–190.
https://doi.org/10.1016/J.NEUROIMAGE.2013.01.047.