Malwina Molendowska1,2, Maria Engel2, Lars Müller2,3, Samo Lasic4,5, Derek K Jones2, Chantal MW Tax2,6, and Filip Szczepankiewicz1
1Medical Radiation Physics, Lund University, Lund, Sweden, 2Cardiff University Brain Research Imaging Centre, Cardiff University, Cardiff, United Kingdom, 3Leeds Institute of Cardiovascular and Metabolic Medicine, University of Leeds, Leeds, United Kingdom, 4Danish Research Centre for Magnetic Resonance, Centre for Functional and Diagnostic Imaging and Research, Copenhagen University Hospital Amager and Hvidovre, Copenhagen, Denmark, 5Diagnostic Radiology, Clinical Sciences Lund, Lund University, Lund, Sweden, 6Image Sciences Institute, University Medical Center Utrecht, Utrecht, Netherlands
Synopsis
Keywords: Microstructure, Microstructure, Signal Representations, Prostate
Motivation: Clinical diffusion MRI for prostate cancer diagnosis has limited sensitivity and specificity to heterogenous microstructural changes.
Goal(s): Quantify time-dependent diffusion and diffusional variance at a high spatial resolution in human prostate in vivo.
Approach: The diffusion encoding waveforms were tailored to probe micro-anisotropy and diffusion time effects at high b-values. Ultra-strong gradients and spiral readout enabled high-resolution and high image fidelity at a high SNR.
Results: Significant time-dependent diffusion was observed in all diffusion parameters in three volunteers, including prostate cancer patients.
Impact: The proposed methodology enables
evaluation of microscopic anisotropy and time-dependent diffusion in the
prostate and provides insights into how dMRI should be interpreted at low and
high b-values. The produced diffusion parameters may serve as
biomarker candidates in future studies.
Introduction
Tensor-valued diffusion encoding enables a more comprehensive description of tissue microstructure than conventional diffusion encoding1. Optimized diffusion-encoding waveforms are highly efficient but exhibit different encoding frequencies, i.e., effective diffusion times2,3. If studied tissue contains restrictions on multiple scales, diffusion time effects may cause erroneous interpretation/quantification of its features2,4. An excellent example of this is the prostate where time-dependent diffusion has been demonstrated5 and exploited to better depict its microstructure6. Therefore, in the prostate, the application of tensor-valued diffusion-encoding requires careful attention to diffusion times across different b-tensors.
We demonstrate for the first time an experimental design and analysis that accounts for diffusion time effects when using tensor-valued diffusion-encoding in the human prostate in vivo. To enable this technical challenge, we leveraged efficient diffusion-encoding waveforms7,8, spiral readout9,10, advanced image reconstruction11,12 with field monitoring13, and ultra-strong gradients14,15.Methods
Study cohort: We scanned one healthy control (35y) and two patients (67 and 73y) with biopsy-confirmed cancers (Gleason grade 3+3, low-grade) with prior ethical approval.
Diffusion-encoding waveforms: The waveforms (Fig.1) were designed to modulate the b-tensor ($$$\textbf{B}$$$)16 and the “m-tensor” ($$$\textbf{M}$$$)3. $$$\textbf{M}$$$ describes the variance of the encoding frequency spectra; high values correspond to short diffusion time and high frequencies. Across waveforms, we modulate:
1) the diffusion-weighting ($$$b=\mathrm{Tr(\textbf{B})}$$$),
2) the b-tensor “shape”/ “anisotropy” ($$$b_\Delta$$$)17
3) restriction weighting ($$$m=\mathrm{Tr(\textbf{M})}$$$), and
4) the m-tensor shape ($$$m_\Delta$$$, related to the spectral anisotropy)3.
The waveforms for spherical b-tensor encoding were obtained by numerical optimization18 with additional constraints that yield an approximately axisymmetric m-tensor8. Additional waveforms were derived from the first by selecting subsets from it (Fig.1). Obtained four waveforms provide four unique combinations of $$$b_\Delta$$$, $$$m$$$, and $$$m_\Delta$$$.
MRI data acquisition: Images were acquired on a 3T Connectom research-only scanner (Siemens Healthcare, Erlangen, Germany).
Multi-echo GRE images were used to estimate $$$B_0$$$-maps and coil sensitivities.
Diffusion MRI was performed with a prototype pulse sequence that enables user-defined diffusion- and spatial-encoding waveforms19 (Fig.1). Diffusion-encoding waveforms were scaled to yield b = [0, 0.1, 0.7, 1.4, 2] ms/μm2 in [5, 4, 6, 15, 20] rotations, respectively. The readout was accomplished with spirals20 to yield acceleration factor=2.24, voxel size=1.15×1.15×5 mm3, TE=62 ms, TR=3 s, #slices=18, and a scan time of 10:30 min.
Image reconstruction: Data were reconstructed using an “expanded encoding model”11,12,21,22 including static $$$B_0$$$ and higher order field23,24, measured with a field-camera (Skope Magnetic Resonance Technologies)13.
Post-processing and parameter estimation: Complex data was denoised25,26, motion-corrected27 and smoothed (2D-Gaussian, σ=0.7 mm). The signal representation was based on Lundell and Lasic3
$$log\left(\frac{S}{S_0}\right)=-b(D+mD_r)+\frac{b^2}{2}(V_I+m^2 V_{I_r})+\frac{b^2}{2}(b_∆^2V_A+m^2m_Δ^2V_{A_r})$$
where the long-time (zero-frequency) parameters are the apparent mean diffusivity ($$$D$$$), variance of isotropic diffusivities ($$$V_I$$$), and the variance due to microscopic diffusion anisotropy ($$$V_A$$$)1,28; parameters with subscript $$$“r”$$$ denote how fast each changes with the restriction weighting. We display parameters at zero-frequency (no subscript) and high-frequency (subscript hf, e.g., $$$D_{hf}=D+mD_r$$$), or their difference (prefix $$$\Delta$$$, e.g., $$$\Delta{D}=m_{max}D_r$$$).Results & Discussion
The signal
and estimated parameters could be reconstructed without visible distortions
(Fig.2). Higher encoding frequencies (shorter diffusion times) reduce the
diffusion-weighted signal and increase the apparent diffusivity. The isotropic
diffusional variance is consistently higher than the anisotropic variance ($$$V_I>V_A$$$) in partial agreement with previous works29,30.
The signal
representation accounted well for the dynamics of the signal (Fig.3). It
visualizes the hallmarks of time-dependence (initial slope depends on restriction
weighting) and diffusional variance (non-monoexponential signal decay). This
means that diffusion time effects appear already at low b-values.
Based on descriptive
statistics (Fig.4.), the tumours are distinguished by a low diffusivity and
strong diffusion time dependence in the apparent diffusivity (low $$$D$$$ and
high $$$\Delta{D}$$$) as compared to normal appearing tissue. In
patients, the peripheral and transitional zones were dominated by $$$V_I$$$ and $$$V_A$$$, respectively, whereas these parameters
were similar across the healthy prostate. This could be explained by the large
age difference or a yet unknown pathological effect. The time-dependence of
$$$V_I$$$ and $$$V_A$$$, was generally weak (small $$$\Delta{V_I}$$$ and $$$\Delta{V_A}$$$). From theory, we expect the diffusional
variance to decrease at higher encoding frequency4, but limited signal precision and sensitivity to a
positive noise floor bias can counteract this.Conclusions
We presented a novel
approach to measure time-dependent diffusivity and diffusional variance in in
vivo prostate. Time-dependence was mainly observed in the apparent diffusivity,
and among patients, it was strongest in the tumour.
Our results indicate that
diffusion time effects may require consideration when using waveforms adapted
for tensor-valued encoding in the prostate. Although our approach uses relatively
high frequencies, similar frequencies are achievable at clinical systems at
lower b-values, and these effects may thus be visible in more common
acquisitions. Acknowledgements
This work was supported by the Swedish Cancer Society (22 0592 JIA and 22 2011 Pj), the Swedish
Research Council (2021-04844), Franke and Margareta Bergqvists Foundation (SAMV
2022/364), a Wellcome Trust Investigator Award (096646/Z/11/Z), a Wellcome
Trust Strategic Award (104943/Z/14/Z), an EPSRC equipment grant (EP/M029778/1),
and Siemens Healthcare Limited grant to DKJ. CMWT is supported by a Sir Henry
Wellcome Fellowship (215944/Z/19/Z) and a Veni grant (17331) from the Dutch
Research Council (NWO). This study was supported by a Cancer
Research Wales Innovation Grant and a Royal College of Radiologists Pump
Priming Grant. SL is supported by the European Research Council under the
European Union’s Horizon 2020 research and innovation programme (grant number
804746) and NIH (National Institutes of Health) (grant numbers R01NS125781,
R01MH074794).
The authors thank Fabrizio Fasano (Siemens
Healthineers) and Kieran Foley MD (School of Medicine, Cardiff University) for
technical and scientific support.
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