Santiago Coelho1,2, Filip Szczepankiewicz3, Els Fieremans1,2, and Dmitry S Novikov1,2
1Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University Grossman School of Medicine, New York, NY, United States, 2Center for Advanced Imaging Innovation and Research (CAI2R), Department of Radiology, New York University Grossman School of Medicine, New York, NY, United States, 3Medical Radiation Physics, Clinical Sciences Lund, Lund University, Lund, Sweden
Synopsis
Keywords: Diffusion Modeling, Diffusion/other diffusion imaging techniques
Motivation: The advent of quantitative imaging hinges on revealing the information content of MRI measurements. We provide a complete basis- and hardware-independent “fingerprint" for the diffusion signal up to moderate diffusion-weightings.
Goal(s): Find all rotationally invariant information present in the cumulant expansion up to b2.
Approach: We classify all invariants of diffusion and covariance tensors in terms of irreducible representations of the group of rotations, discuss their geometric meaning, and relate them to tissue properties.
Results: We find a complete set of 21 independent rotational invariants up to b2. Previously studied contrasts are expressed via only 7, while the rest provide novel complementary information.
Impact: We map the diffusion covariance tensor onto the
addition of angular momenta, and provide all rotational invariants of the
cumulant expansion (RICE). RICE apply to >50k publicly available human
diffusion MRI datasets, providing new insights into tissue properties.
Introduction
We know that the diffusion tensor1 $$$\mathsf{D}_{ij}$$$ is an
ellipsoid:
$$\mathsf{D}(\hat{\mathbf{n}})=\sum_{i,j}\mathsf{D}_{ij}n_in_j\equiv\mathsf{D}_{00}Y^{00}(\hat{\mathbf{n}})+\sum_m\mathsf{D}_{2m}Y^{2m}(\hat{\mathbf{n}}),\quad(1)$$
with isotropic part $$$\mathsf{D}_{00}\propto\mathrm{MD}$$$,
and anisotropic part described by 5 spherical harmonic (SH) coefficients
$$$\mathsf{D}_{2m}$$$ of degree $$$\ell=2$$$. Intuitively, $$$\ell=0\,\mathrm{(scalar)}$$$ and $$$\ell=2\,\mathrm{(tensor)}$$$ parts are different. This
difference is formalized as follows: $$$\mathsf{D}_{\ell\,m}$$$ with different $$$\ell$$$ do not “mix” under rotations.
$$$\mathsf{D}$$$ has 3 rotational invariants $$$-$$$ quantities independent of the basis. The remaining 3
degrees of freedom (dof) define its orientation.
Our goal is to study the geometry of a more complex object $$$-$$$ the covariance tensor $$$\mathsf{C}_{ijkl}$$$ generalizing the kurtosis tensor2 for
arbitrary b-tensor encoding3,
$$\mathrm{ln}\,S=-\sum_{i,j}\mathsf{B}_{ij}\mathsf{D}_{ij}+\tfrac12\sum_{i,j,k,l}\mathsf{B}_{ij}\mathsf{B}_{kl}\mathsf{C}_{ijkl}+\mathcal{O}(b^3),\quad(2)$$
and relate it to tissue properties.
We use the far-reaching decomposition (1) into irreducible components with
different $$$\ell$$$, and construct
all 18 independent invariants of $$$\mathsf{C}$$$. Together with $$$\mathsf{D}$$$, the 21 rotational
invariants of the cumulant expansion (RICE) form the complete “fingerprint”
of the dMRI signal up to $$$b^2$$$.
Remarkably, all previous model-independent contrasts
(mean-radial-axial kurtosis2; isotropic-anisotropic variance3,4) involve only 4 $$$\mathsf{C}$$$ invariants5.
Together with 3 from $$$\mathsf{D}$$$, the 7 RICE invariants underpin any dMRI studies up to $$$b^2$$$.
The remaining 14 invariants have not been systematically studied.Covariance tensor from addition of angular momenta
Consider
a distribution $$$\mathcal{P}(D)$$$ of
Gaussian compartment tensors, Fig.1a. For such tissue:
$$\begin{aligned}\mathsf{D}_{ij}&=\left\langle\,D_{ij}\right\rangle=\sum_\alpha\,f_\alpha\,D_{ij}^\alpha\\\mathsf{C}_{ijkl}&=\left\langle\!\left\langle\,D_{ij}D_{kl}\right\rangle\!\right\rangle\equiv\left\langle\left(D_{ij}-\left\langle\,D_{ij}\right\rangle\right)\left(D_{kl}-\left\langle\,D_{kl}\right\rangle\right)\right\rangle\end{aligned}\quad(3)$$
are the 1st
and 2nd central moments of $$$\mathcal{P}(D)$$$ (brackets $$$\langle...\rangle$$$ denote averages over the diffusion tensor
distribution while double brackets $$$\langle\langle...\rangle\rangle$$$ denote cumulants).
Similar
to Eq.(1), each compartment’s $$$D_{ij}$$$ can be split into irreducible
components with $$$\ell=0\,\text{and}\,\ell=2$$$. This is equivalent to superposition of
quantum angular momenta $$$\ell=0\,\text{and}\,\ell=2$$$:
$$|D\rangle=D_{00}|0,0\rangle+\sum_mD_{2m}|2,m\rangle.\quad(4)$$
The
overall $$$\mathsf{D}$$$ tensor is a mean of these states over $$$\mathcal{P}(D)$$$.
Using Eq.(3), and shifting
$$$\tilde{D}=D-\langle\,D\rangle$$$, we symbolically write the angular-momentum
representation of the $$$\mathsf{C}$$$-tensor as
$$|\mathsf{C}\rangle=\int\,dD\,\mathcal{P}(D)\,|\tilde{D}\rangle\otimes|\tilde{D}\rangle=\langle\!\langle{D}_{00}D_{00}\rangle\!\rangle\,|0,0\rangle+\sum_m\langle\!\langle{D}_{00}D_{2m}\rangle\!\rangle\,|2,m\rangle+\sum_{m,m’}\langle\!\langle{D}_{2m}D_{2m’}\rangle\!\rangle\,|2,m\rangle\otimes|2,m'\rangle.\quad(5)$$
In
other words, the $$$\mathsf{C}$$$-tensor, given by distribution-averaged direct product of
states of the form (4), formally maps onto addition of two “superposition states” with “angular momenta” $$$\ell=0$$$ and $$$\ell=2$$$. The object $$$|\mathsf{C}\rangle$$$ is reducible, and splits
into irreducible components (Fig.1b,c):
$$\begin{aligned}&\mathrm{Q}^{(0)}\sim\langle\!\langle{D}_{00}D_{00}\rangle\!\rangle\quad\text{(size-size}\,\text{variance)}\\&\mathrm{Q}^{(2)}_M\sim\langle\!\langle{D}_{00}D_{2M}\rangle\!\rangle\quad\text{(size-shape}\,\text{covariance)}\\&\mathrm{T}^{(L)}_M\sim\sum_{m,m'}\langle\!\langle{D}_{2m}D_{2m'}\rangle\!\rangle\,\langle{LM}|2m2m'\rangle,\quad\,L=0,2,4\quad\text{(shape-shape}\,\text{covariance)}\\\end{aligned}\quad(6)$$
given
by the corresponding Clebsch-Gordan coefficients5 of the addition of angular
momenta 2 and 2, obeying the selection rule $$$M=m+m′$$$.
As a result, the
space of covariance tensors $$$\mathsf{C}$$$ decomposes into a direct sum of 5 irreducible
representations with different $$$\ell=0,2,4$$$:
$$\mathsf{C}\in0\oplus2\oplus0\oplus2\oplus4.\quad(7)$$
Relation to dMRI measurements
How to proceed from $$$\mathsf{C}_{ijkl}$$$ (Eq.(2)) to $$$\mathsf{T}\,\text{and}\,\mathsf{Q}$$$ and irreducible components? First, we isolate the kurtosis tensor $$$\mathsf{W}_{ijkl}=\frac{3}{\overline{D}^2}\mathsf{S}_{ijkl},\quad\mathsf{S}_{ijkl}=\mathsf{C}_{(ijkl)}$$$, as
a fully-symmetric part of $$$\mathsf{C}$$$, having $$$15=1+5+9$$$ dof. It decomposes
into irreducible components with $$$\ell=0,2,4$$$ (with dimensions $$$2\ell+1$$$); the asymmetric
complement $$$\mathsf{A}=\mathsf{C}-\mathsf{S}$$$ has $$$6=21-15=1+5$$$ degrees of freedom, decomposing into $$$\ell=0,2$$$ components
(Fig.3):
$$\begin{aligned}&\mathsf{C}=\mathsf{S}+\mathsf{A}\\&\mathsf{S}=\mathsf{S}^{(0)}+\mathsf{S}^{(2)}+\mathsf{S}^{(4)}\\&\mathsf{A}=\mathsf{A}^{(0)}+\mathsf{A}^{(2)}\end{aligned},\quad(8)$$
One
of our main results is the relation between the above $$$\mathsf{S},\,\mathsf{A}$$$ tensors, readily
determined from measurements, to the above $$$\mathsf{T},\,\mathsf{Q}$$$ components related to
tissue properties:
$$\begin{aligned}&\mathsf{Q}^{(0)}=\frac{5}{9}\mathsf{~S}^{(0)}+\frac{2}{9}\mathsf{~A}^{(0)},\\&\mathsf{Q}^{(2)}=\frac{7}{9}\mathsf{~S}^{(2)}-\frac{2}{9}\mathsf{~A}^{(2)},\\&\mathsf{T}^{(0)}=\frac{4}{9}\mathsf{~S}^{(0)}-\frac{2}{9}\mathsf{~A}^{(0)},\\&\mathsf{T}^{(2)}=\frac{2}{9}\mathsf{~S}^{(2)}+\frac{2}{9}\mathsf{~A}^{(2)},\\&\mathsf{T}^{(4)}=\mathsf{S}^{(4)}.\end{aligned}\quad(9)$$Rotational invariants of $$$\mathsf{C}$$$
To construct tensor invariants, we split them into those intrinsic
to a given representation, and those mixing representations. We define
intrinsic invariants as those belonging to a single irreducible
component, e.g. $$$\mathsf{S}^{(\ell)},\,\mathsf{T}^{(\ell)}$$$. Conversely, mixed invariants define relative orientations between different irreducible components with $$$\ell>0$$$.
How many invariants are there? For any tensor, the number of invariants equals its number of parameters minus 3, which define its overall
orientation7,8,9.
This
yields 1 intrinsic invariant for each $$$\ell=0$$$ component; 2 for each $$$\ell=2$$$; and 6 for $$$\ell=4$$$, totalling 12 intrinsic invariants:
$$\begin{aligned}&\mathsf{Q}_0=\mathsf{Q}^{(0)}=\tfrac{1}{3}\mathrm{tr}\mathsf{Q}=\overline{\mathsf{Q}},\\&\mathsf{Q}_{2\mid{n}}=\left(\tfrac{2}{3}\mathrm{tr}\left(\mathsf{Q}^{(2)}\right)^n\right)^{1/n},\quad{n}=2,3,\\&\mathsf{T}_0=\mathsf{T}^{(0)}=\tfrac{1}{5}\mathrm{tr}\mathsf{T}=\overline{\mathsf{T}},\\&\mathsf{T}_{2\mid{n}}=\left(\tfrac{2}{3}\mathrm{tr}\left(\mathsf{T}^{(2)}\right)^n\right)^{1/n},\quad{n}=2,3,\\&\mathsf{~T}_{4\mid{n}}=\left(\tfrac{8}{35}\mathrm{tr}\left(\mathsf{T}^{(4)}\right)^n\right)^{1/n},\quad{n}=2\ldots5,\\&\mathsf{T}_{4\mid{6}}=\mathrm{tr}^{1/3}\mathsf{E}^3,\quad\mathsf{~T}_{4\mid7}=\mathrm{tr}^{1/3}\tilde{\mathsf{E}}^3,\quad\mathsf{E}_{ij}=\sum_a\lambda_a\mathsf{E}_{ij}^{(a)},\quad\text{and}\quad\tilde{\mathsf{E}}_{ij}=\sum_{a\neq{a}_0}\mathsf{E}_{ij}^{(a)},\end{aligned}\quad(10)$$
where $$$\mathsf{E}_{ij}^{(a)}$$$ are $$$\mathsf{T}^{(4)}$$$ eigentensors10.
Given that $$$\mathsf{C}$$$ has $$$21-3=18$$$ total invariants,
the remaining $$$6=3+3$$$ are mixed, and can be defined via relative
Euler angles between $$$\mathsf{T}^{(2)}-\mathsf{T}^{(4)}$$$ and $$$\mathsf{T}^{(2)}-\mathsf{Q}^{(2)}$$$ eigenframes, Fig.3.
Note that only 7 intrinsic invariants from Eq.(10) suffice to generate all previous model-independent contrasts1-5
up to $$$b^2$$$ without assumptions on $$$\mathcal{P}(D)$$$:
$$\begin{aligned}\mathrm{MD}&=\mathsf{D}_0,\\\mathrm{FA}&=\sqrt{\tfrac{3\mathsf{D}_2^2}{4\mathsf{D}_0^2+2\mathsf{D}_2{}^2},}\\\mathrm{MK}&=\tfrac{3\mathsf{S}_0}{\mathsf{D}_0^2},\\\mu\mathrm{FA}&=\sqrt{\tfrac{15\mathsf{T}_0+3\mathsf{D}_2^2}{10\mathsf{T}_0+2\mathsf{D}_2^2+12\mathsf{D}_0^2}},\\\mathsf{D}_{\|}^{\text{ax,sym}}&=\mathsf{D}_0+\mathsf{D}_2,\\\mathsf{D}_{\perp}^{\text{ax,sym}}&=\mathsf{D}_0-\tfrac{1}{2}\mathsf{D}_2,\\\mathsf{W}_{\|}^{\text{ax,sym}}&=\mathsf{W}_0+\mathsf{W}_2+\mathsf{W}_4,\\\mathsf{W}_{\perp}^{\text{ax,sym}}&=\mathsf{W}_0-\tfrac{1}{2}\mathsf{~W}_2+\tfrac{3}{8}\mathsf{W}_4,\\\mathbb{V}_{\mathrm{I}}&=\mathsf{Q}_0,\\\mathbb{V}_{\mathrm{A}}&=\mathsf{T}_0+\tfrac{1}{5}\mathsf{D}_2{}^2.\end{aligned}\quad(11)$$
Human Diffusion MRI
A 33-year-old male volunteer underwent MRI in a whole-body
3T-system (Siemens Prisma) using a 20-channel head coil. Maxwell-compensated
free-gradient diffusion waveforms yielded linear (30b=1ms/μm2+60b=2ms/μm2) and planar (60b=1.5ms/μm2) b-tensor
encoding using a prototype spin echo sequence with EPI readout11. Imaging parameters: voxel-size=2x2x2mm3,TR=4.2s,TE=90ms,bandwidth=1818Hz/Px,Rgrappa=2,pF=6/8,multiband=2. Scan time: 11.5min.Results and Discussion
We propose two equivalent irreducible decompositions for $$$\mathsf{C}$$$ with distinct physical meanings: TQ, Eq.(6), splits different sources of compartmental variance ($$$\mathsf{Q}^{(0)},\,\mathsf{Q}^{(2)},\,\mathsf{T}$$$) while SA, Eq.(8), highlights information accessible with LTE ($$$\mathsf{S}$$$) and non-LTE ($$$\mathsf{A}$$$) diffusion-weightings.
Furthermore, we provide a systematic way to compute all rotationally invariant information present in the $$$\mathcal{O}(b^2)$$$ dMRI signal, summarized in Fig.3. Figure 4 shows TQ invariants for a healthy volunteer.
Main 7 RICE maps, $$$\mathsf{S}_{\ell|2}\propto\mathrm{tr}^{1/2}(\mathsf{S}^{(\ell)})^2$$$, Eq.(10), are related to conventional contrasts, Eq.(11). The remaining 14 $$$\mathsf{C}$$$ invariants contain unexplored information.
RICE maps belong to distinct irreducible
representations of rotations, and thus, represent “orthogonal” contrasts up to $$$\mathcal{O}(b^2)$$$.
Representing the dMRI signal via scalar invariant maps with definite
symmetries will underpin machine learning classifiers of brain pathology, development,
and aging.Acknowledgements
This work has been
supported by NIH under NINDS awards R01 NS088040, NIBIB award R01 EB027075, and
was performed under the rubric of the Center for Advanced Imaging Innovation
and Research (CAI2R, www.cai2r.net), an NIBIB National Center for Biomedical
Imaging and Bioengineering (NIH P41 EB017183). The authors are grateful to Valerij Kiselev and Sune Jespersen for fruitful discussions.References
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