Qing Lin1, Weikun Chen1, Taishan Kang2, Xinran Chen1, Liangjie Lin3, Zhong Chen1, Shuhui Cai1, and Congbo Cai1
1Xiamen University, Xiamen, China, 2Magnetic Resonance Center, Zhongshan Hospital Afflicated to Xiamen University, Xiamen, China, 3Clinical & Technical Support, Philips Healthcare, Beijing, China
Synopsis
Keywords: Quantitative Imaging, Fat, T2 mapping
Motivation: Skeletal muscle inflammation/necrosis and fat infiltration are strong indicators of disease activity and progression in many neuromuscular disorders. They can be assessed by muscle T2 relaxometry and water-fat separation techniques, respectively.
Goal(s): Develop a method for simultaneous water-fat separation and T2 quantification.
Approach: The chemical-shift encoding multiple overlapping-echo detachment (CSE-MOLED) sequence was designed for MRI data acquisition, and synthetic data and deep learning were used for image reconstruction.
Results: The experiments showed that accurate T2 maps of water and fat and proton density fat fraction maps (PDFF) can be fast and simultaneously acquired by CSE-MOLED.
Impact: A new MRI
method is proposed for fast and simultaneous T2 and PDFF mapping,
which may help improve the clinical diagnosis of neuromuscular diseases.
Introduction
The T2
maps of water and fat (T2,w,T2,f) and proton density fat
fraction (PDFF) map can provide valuable information for clinical diagnosis of
diseases [1], especially in neuromuscular diseases. A method has been proposed
to obtain T2,w and T2,f maps using CPMG-based sequence [1].
However, it requires collection of multiple images with different echo times
(TE) to achieve T2 quantification, which results in a long
collection time. Here, a method based on the chemical-shift encoding multiple
overlapping-echo detachment [2-4] (CSE-MOLED) sequence is proposed. It can quickly
obtain T2 and proton density (PD) maps of water and fat
respectively, as well as PDFF map. Methods
Pulse sequence
design:
Figure 1(a)
shows the CSE-MOLED sequence. It acquires a series of echo signals with
different T2 weights by continuously applying small-angle excitation
pulses α. To enable water–fat chemical-shift encoding, a time shift is added
before each readout module.
Assuming that the
time shift in the l-th scan and m-th readout module is $$$\Delta TE_{l,m}$$$
,
the n-th echo signal of a voxel can
be written as:
$$S_{l,m,n}(x,y)
=\begin{cases}\frac{1}{2^{n} }|\sin\alpha \cos^{4-n}\alpha|(1+\cos\alpha
)^{n-1}(1-\cos\beta )\rho_{l,m,n}(x,y)...n\in\left \{1,2,3,4 \right \}
\\
\frac{1}{2^{10-n}
}|\sin \alpha \cos ^{n-5}\alpha|(1+\cos\alpha)^{8-n}(1-\cos \beta )^{2} \rho
_{l,m,n}(x,y)...n\in \left \{ 5,6,7,8 \right \}
\end{cases}$$
$$\rho _{l,m,n}(x,y) =\rho _{w}
(x,y)e^{-TE_{n}/T_{2,w}(x,y) }e^{i2\pi
f_{B0}(x,y)\Delta TE_{l,m} }+\sum_{j=1}^{6}c_{j}\rho
_{f}(x,y+\Delta y_{j}
)e^{-TE_{n}/T_{2,f}(x,y+\Delta y_{j})
}e^{i2\pi f_{j}\Delta TE_{l,m}}e^{i2\pi f_{B0}(x,y+\Delta y_{j})\Delta
TE_{l,m}} $$
where $$$\rho _{w}$$$
and $$$\rho _{f}$$$
denote the complex-valued water and fat
components,
$$$c_{j}$$$and$$$f_{j}$$$
(Hz)
are relative amplitude and chemical-shift of j-th fat peak respectively[5],$$$\Delta y_{j}$$$
is the position offset of the j-th fat peak in the phase encoding
direction, and$$$f_{B0}$$$
(Hz)
is the off-resonance frequency of the B0 field.
Synthetic Data:Figure 1(b) shows the process of data
synthesis. The water and fat images from public database [6] were nonlinearly
transformed and assigned with appropriate T2 and PD values, and then
synthesized into T2 and PD maps of water and fat. The final templates
contained water and six fat peak components, and each fat peak component was
assumed to have the same T2. The Bloch simulation was
performed to synthesize CSE-MOLED images using MRiLab [7], and multiple
non-ideal factors were considered.
Network training:Figure 2 shows the process of network
training. The
inputs of U-Net were the real and imaginary parts of CSE-MOLED images. The
outputs were T2 and PD maps of water and fat, respectively. During
the network training, a loss constraint was added to PDFF to make it more
accurate.
Experiments:This study was approved by the IRB at Zhongshan
Hospital of Xiamen University. All experiments were carried out on a 3T
scanner (Ingenia CX, Philips Healthcare), using a 32-channel abdomen receive coil. Four healthy volunteers were enrolled in the in vivo scans. A custom-made
phantom with 13 small tubes was used in the phantom experiments.
The traditional SPIR and mDixon-Quant technique were used to obtain contrast images. Reference T2 maps were acquired with SE sequence. Reference PDFF maps, T2 maps of water and
fat, were obtained by 2point mDixon-TSE.
Figure 3(a) shows the imaging parameters of
different sequences. The field of view was 22×22 cm2 and slice thickness
was 5 mm for all sequence. CSE-MOLED was performed for two times with different
∆TEs(∆TE1,1=0ms, ∆TE1,2=-5.75ms, ∆TE2,1=1.15ms, ∆TE2,2=0.575ms), corresponding to
different water–fat phase shifts of 0°,-90°,180°,90°. Single slice scan time of
CSE-MOLED was 162 ms.Results
Figure 3 shows the results of one healthy volunteer. As the yellow
arrows show, the water images obtained by SPIR SE-EPI still remained fat-related
artifacts. The water/fat images by CSE-MOLED matched well with those
by mDixon-Quant.
As shown in Figure 4 and Figure 5(a), the T2,f, T2,w,
and PDFF measured by CSE-MOLED were close to those by mDixon-TSE. For tubes composed of both water and fat (1-10), the global T2
measured by SE was shorter than the T2,w
measured by mDixon-TSE and CSE-MOLED. The T2* of
fat was shorter than water in
the phantom, however mDixon-Quant assumes that water and fat have the same T2*,
resulting in an underestimation of PDFF.
Figure 5(b) presents the repeatability test results of CSE-MOLED from 8
measurements. The T2,f, T2,w, and PDFF across all tubes
remain stable throughout the scan with low CVs (below 1%). Figure 5(c) presents
the relationship between the volume of cream and PDFF, where the results by
CSE-MOLED show the best proportional relationship.Discussion and conclusion
This study provides a new approach
for rapid multi-parametric quantitative imaging of water and fat. The T2 maps
of both water and fat, as well as PDFF maps, can be simultaneously acquired,
which has significant potential for clinical diagnosis of neuromuscular
diseases.Acknowledgements
This work was supported in
part by the National Natural Science Foundation of China under grant numbers
82071913, 12375291 and 22161142024.References
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