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Multi-Echo FLORET UTE MRI
Matthew Willmering1, Guruprasad Krishnamoorthy2,3, Joseph Plummer1,4, Abdullah Bdaiwi1, Laura Walkup1,4,5, Zackary Cleveland1,4,5, James Pipe3, and Jason Woods1,4,5
1Cincinnati Children’s Hospital Medical Center, Cincinnati, OH, United States, 2Philips Healthcare, Rochester, MN, United States, 3Mayo Clinic, Rochester, MN, United States, 4University of Cincinnati, Cincinnati, OH, United States, 5University of Cincinnati Medical Center, Cincinnati, OH, United States

Synopsis

Keywords: Data Acquisition, Data Acquisition

FLORET UTE MRI has been used for many applications including lung, brain, musculoskeletal, and multinuclear imaging. The appeal of the pulse sequence comes from its high SNR and sampling efficiencies. With recent improvements minimizing artifacts, high-quality FLORET images are obtained routinely. However, acquisition of multiple echoes has not been investigated. Here, we determined the feasibility and optimal pulse-sequence design of multi-echo FLORET. Collecting echoes independently, but interleaved, produces the highest quality images, especially for ≥3 echoes. Furthermore, additional echoes provide improvements to image quality and add clinically useful contrast like T2*.

Introduction

Ultrashort echo time (UTE) MRI with multiple echoes improves image quality and provides additional information, especially for short T2* species[1]. Qualitatively, different echo times (TE) have different tissue contrast that can be harnesses to generate quantitative maps of T2*, magnetic susceptibility, B0, fat-fraction, and proton density. Rather than acquiring each TE separately, most multi-echo implementations acquire subsequent echoes from a single excitation after rewinding to the center of k-space[2]. However, this limits the minimum ∆TE to the length of the encoding and rewinder and makes it subject to progressive trajectory errors that accumulate across echoes.
Fermat looped, orthogonally encoded trajectories (FLORET) is an efficient 3D UTE spiral implementation which has shown benefits for musculoskeletal, lung, and multi-nuclear imaging[3-8]. However, acquisition of valuable multi-echo images has yet to be demonstrated for FLORET. In this study, we implemented and investigated multi-echo imaging with FLORET.

Methods

FLORET trajectories were designed as previously described[3, 7, 9]. Trajectory calculations included a gradient transform function (GTF) inspired gradient frequency limitation (1kHz), an optional pre-compensation (PC)(Figure 1A,B). RF-spoiled acquisitions were collected in two different ways for 5 echoes: 1) collected following rewinding back to the center of k-space (rewound, Figure 1C) or 2) collected as a separate interleave (multi-acquisition, Figure 1D). MRI was acquired for structural and quantitative phantoms (Figure 2). All images were fully sampled with the following parameters: Philips Ingenia Elition, 3.0T; FOV = 350mm isotropic; resolution = 2mm isotropic; readout = 2.0ms; FLORET hubs = 3; FLORET alpha = 36°; FLORET interleaves: 34; max gradient strength = 65mT/m; max slew = 220T/m/s, with TE and TR dependent on method. For rewound echoes, TEs(shortest) = 0.10, 3.1, 6.1, 9.1, and 12.1ms, and TR = 16ms; for multi-acquisition echoes, TE = 0.10, 0.58, 1.15, 2.3, and 9.2ms and TR = 13ms. Scan times ranged from 2 minutes to 9 minutes. A high-resolution, single-echo image was collected for reference with the same parameters except for 1mm isotropic voxels, TE = 0.10ms, TR = 5.4ms, no PC, and a scan duration of 6 minutes (Figure 2).
Images were reconstructed using the Philips Recon2.0 platform as previously described[7]. Image post-processing, parameters maps, and image combinations were performed in MATLAB2021b.

Results

Both echo-acquisition methods, and gradient-waveforms calculations produced high-quality UTE images (Figure 3). For the second echo, the rewound method shows more signal decay in the quantitative phantoms, which is expected with the longer TE. Without PC, the 5th-echo images contained artifacts for both echo acquisition methods, with the artifacts being more intense with the rewound method. Adding PC to the gradient-waveform calculation slightly improved the image quality for the multi-acquisition method but did not provide any clear benefit for the rewound method. As expected, the acquisitions with images of higher quality produced higher-quality parameter maps (Figure 4) and image combinations (Figure 5), e.g., in the T2* maps in Figure 4, the rewound method acquisitions have artifacts and poor differentiation of the phantom’s vials. Quantitatively, the rewound method reduced the average percent error in T2* by 200%. For fat-fraction, the average percent error increased 20% with the rewound method, while the standard deviation of the maps reduced by 60%. No noticeable changes were observed for gradient PC or for other measures of percent error and standard deviation.

Discussion

The high-quality single-echo images are consistent with a past study showing that frequency-limiting of FLORET waveforms produced higher quality images[7]. For additional echoes, two likely factors lead to reduced image quality: trajectory imperfections and off-resonance artifacts. As with many UTE and spiral sequences, FLORET uses large gradient magnitudes and slew rates, which make the k-space trajectories prone to inaccuracies from gradient imperfections. These imperfections progressively accumulate over echoes, resulting in the artifacts using the rewound method. For longer TE, B0 imperfections and susceptibility produce artifacts as seen in both the multi-acquisition and rewound methods. Thus, the rewound method should be limited to only a few echoes.
In practice, the multi-acquisition method is less time efficient. However, the concomitant higher image quality also enables greater control of TEs and does not suffer from the same potential bias due to diffusion-weighting as the rewound method[10, 11].
T2* maps, B0 maps, water-only images, fat-only images, and fat-fraction maps can all be obtained using multi-echo FLORET. Each of these can provide clinically relevant contrast or be harnessed to improve image quality (such as off-resonance corrections). For example, T2-weighted lung images can assess disease severity and differentiate infection from mucus plugs in cystic fibrosis and idiopathic pulmonary fibrosis[12-14]. In the brain, multi-echo UTE can quantify myelin, which plays an important role in inflammatory and neurodegenerative disorders[15, 16]. Lastly, for musculoskeletal applications, image subtraction provides excellent visualization of short-T2* components, including tendons and ligaments[1, 17]. Future work will investigate these capabilities in-vivo.

Conclusion

Multi-echo FLORET was successfully demonstrated using two methods for echo acquisition. Due to gradient imperfections, additional echoes should be acquired individually in an interleaved fashion—particularly for high echo numbers. Water-fat separation, T2* maps, and fat-fraction maps are also feasible using multi-echo FLORET. Overall, multi-echo FLORET provides additional information, which is beneficial for clinical assessment in many applications, efficiently and at high spatial resolution.

Acknowledgements

The authors thank the following sources for research funding and support: NIH R01 HL131012, NIH R01 HL146689, NIH R01HL143011, NIH 2R01HL126771, NIH R00HL138255, and Philips Healthcare.

References

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Figures

Sequence Design. A) FLORET gradient waveforms without (GTF) and with pre-compensation (PC GTF). B) Resulting trajectories. Echoes were acquired following rewinding to the center of k-space (rewound, C) or as separate acquisitions (multi-acquisition, D)

Structural and quantitative phantoms imaged in this study in all three planes. Image acquired using a single-echo FLORET acquisition without gradient pre-compensation (PC). The fat-fraction phantom ranges from 0% to 100% and the T2* phantom ranges from 0.9ms to 83ms.

FLORET images from a 5-echo acquisition. Top row collects subsequent echoes after rewinding to the center of k-space while the bottom row collects the subsequent echoes as a separate interleaved acquisition. First, second, and fifth echoes are shown without (GTF) and with gradient pre-compensation (PC GTF). Red arrows show an example difference between echo acquisition methods and blue arrows show improvement with gradient pre-compensation.

Example T2* (left) and fat-fraction (right) maps using the multi-echo FLORET acquisitions. T2* images contain the T2* and structural phantoms while the fat-fraction images contain the fat-fraction and structural phantoms. Water-fat separation was completed with a multi-point Dixon method. The rewound echo acquisitions contain areas of inaccurate quantitative measures due to image artifacts and shows little difference between the vials with different T2* and fat-fractions properties.

Echo image combinations of the T2* and structural phantoms. Short T2* signals, left, are visible in difference images between the first and second echoes. Medium T2* signals, middle, are similarly visible using different echo times. T2* weighted image, right, shows average signal across echo times, providing contrast proportional transverse relaxation. Red arrows show example differences between echo acquisition methods and blue arrows show improvement with gradient pre-compensation.

Proc. Intl. Soc. Mag. Reson. Med. 31 (2023)
5119
DOI: https://doi.org/10.58530/2023/5119