Daniel West1, David Leitão1, Raphael Tomi-Tricot1,2, Tobias C Wood3, Jo Hajnal1,4, and Shaihan Malik1,4
1Biomedical Engineering, King's College London, London, United Kingdom, 2MR Research Collaborations, Siemens, Frimley, United Kingdom, 3Department of Neuroimaging, King's College London, London, United Kingdom, 4Centre for the Developing Brain, King's College London, London, United Kingdom
Synopsis
Keywords: System Imperfections: Measurement & Correction, Gradients
In this work we
use a general sequence to characterize gradient imperfections at low field
(0.55T) by measuring the gradient impulse response function (GIRF). Maxwell
fields become non-negligible at lower field strengths and so we incorporate
these into our GIRF calculation to form a single processing pipeline. Once the predictive ability of the GIRF was
confirmed, we use our data to estimate the Maxwell phase and compare this to an analytic approach; good agreement is observed. These results will inform future low-field investigations
and enable an improved image quality for sequences that are particularly prone
to gradient imperfections.
Introduction
The gradient
performance of commercial MR systems is imperfect due to factors such as: time
delays, eddy currents and mechanically induced field oscillations. To
characterize these distortions, NMR field probes1,2 can be used and although accurate, these devices are expensive and not readily
available. Gradient impulse response functions (GIRFs) assume that the gradient
chain is a linear time-invariant system and have often been shown to be a
sufficient surrogate for field probes3,4.
GIRF calculation is performed by measuring the response of the gradient system
using a combination of input waveforms. The response of the gradient system
itself could be measured using field probes4 or imaging-based methods such as the thin-slice method3,5–7.
This technique is usually limited to providing zeroth-order and first-order self-terms
but cross-terms can also be determined8.
Beyond the
imperfections mentioned above, MRI gradients are accompanied by higher-order
spatially varying fields known as concomitant (Maxwell) fields. These are often
neglected during MR experiments but become more significant at lower field
strengths due to an inverse linear dependence on magnetic field strength. Quantification
of their impact becomes important in low-field MRI and correction strategies
have previously been proposed9 though here, Maxwell terms were derived from gradient terms and not measured
directly.
In this work we
use a spatially resolved gradient measurement method10 to characterize GIRFs and extend this to measure Maxwell terms from a single
acquisition. We demonstrate its effectiveness on data acquired at 0.55T.Theory
The phase
evolution during the sequence in Figure 1 can be described by Equation 1:
$$[1]\;\phi(x,y,t)=\mathrm{\mathbf{x}}\cdot\mathrm{\mathbf{k}}+\gamma B_0t+\phi_{\mathrm{C}}$$
$$$\phi$$$ is a matrix with dimensions of number of pixels ($$$\mathrm{N_p}$$$) by the number of timepoints ($$$\mathrm{N_t}$$$), $$$\mathrm{\mathbf{x}}$$$ is a position matrix that has dimensions $$$\mathrm{N_p}\times3$$$ and $$$\mathrm{\mathbf{k}}$$$ is a $$$3\times\mathrm{N_t}$$$ matrix that is related to the actual gradient waveform by Equation 2:
$$[2]\;\mathrm{\mathbf{k}}=\gamma\mathrm{\mathbf{g}}\left[\begin{matrix}1&1&1&...&1\\0&1&1&...&1\\0&0&1&...&1\\...&...&...&...&...\\0&0&0&...&1\end{matrix}\right]\Delta t=\gamma\mathrm{\mathbf{g}}\mathrm{\mathbf{A}}\Delta t$$
where $$$\mathrm{\mathbf{g}}$$$ has dimensions $$$3\times\mathrm{N_t}$$$ and $$$\mathrm{\mathbf{A}\Delta}t$$$ is an integration matrix with dwell time $$$\Delta t$$$. $$$\phi_{\mathrm{C}}$$$ is the phase evolution due to concomitant fields and is given by Equation 3:
$$[3]\;\phi_{\mathrm{C}}=-\gamma\mathrm{\mathbf{B_C}}\mathrm{\mathbf{A}}\Delta t$$
where:
$$[4\mathrm{a}]\;\mathrm{\mathbf{B_C}}=\sqrt{B_x^2+B_y^2+B_z^2}-B_z$$
$$[4\mathrm{b}]\;B_x=-0.5g_zx+g_xz$$
$$[4\mathrm{c}]\;B_y=-0.5g_zy+g_yz$$
$$[4\mathrm{d}]\;B_z=B_0+g_xx+g_yy+g_zz=B_0+\mathrm{\mathbf{g}}\cdot\mathrm{\mathbf{x}}$$
Methods
Experiments
were completed on a clinical 0.55T scanner (MAGNETOM Free.Max, Siemens Healthcare,
Erlangen, Germany) and a large disc-shaped MR system water phantom was used for
all measurements (4.6x4.6x10mm resolution, single-slice, TR = 20ms, TE = 5ms, FOV
= 440mm). This phantom was scanned in all three orientations with two
phase-encoding axes (Figure 1) such that all cross-terms could be estimated. As per
previous work8, a variable amplitude
chirp waveform was used as our test waveform with a duration of 10ms and
maximum amplitude of 2mT. Its amplitude was varied so that we could operate at
the maximum slew rate limit of the scanner.
Image
phase was normalized by the phase of an image acquired without a chirp waveform
and then used to compute $$$\mathrm{\mathbf{g}}$$$ using the steps outlined above. Typical GIRFs were
calculated using Equation 5:
$$[5]\;H=\frac{\mathcal{F}(\mathrm{\mathbf{g}})}{\mathcal{F}(\mathrm{\mathbf{g_{nom}}})}$$
where $$$\mathcal{F}$$$ denotes the Fourier transform in the time dimension and $$$\mathrm{\mathbf{g_{nom}}}$$$ is the nominal input gradient waveform. We estimate the corresponding Maxwell phase from Equation 6 where $$$h=\mathcal{F}^{-1}H$$$:
$$[6]\;\hat\phi_{\mathrm{C}}=\phi_{\mathrm{meas}}-(\mathrm{\mathbf{g_{nom}}}\ast h(t))-\gamma B_0 t$$
$$$\phi_{\mathrm{meas}}$$$ is the total measured phase from the experiment. Lastly $$$\hat\phi_{\mathrm{C}}$$$ is compared to that obtained analytically ($$$\phi_{\mathrm{C}}$$$). The latter is determined using $$$\mathrm{\mathbf{g_{nom}}}\ast h(t)$$$ which is the same assumption as has been used previously9.Results and Discussion
Figure
2 shows a full set of GIRF terms. Zeroth-order terms are generally small with
the largest being in the
z-direction. First-order self-terms are similar to one another and an
"m-shaped" variation with frequency is observed. Cross-terms are also small with
the largest effect seen on the x-axis when applying a gradient along the
z-direction. Figure 3 demonstrates that GIRF estimation is successful;
trajectory residuals are almost zero when applying the measured GIRF to $$$\mathrm{\mathbf{g_{nom}}}$$$.
Figure
4 shows $$$\phi_{\mathrm{meas}}$$$ in all
three orientations and compares the estimated $$$\hat\phi_{\mathrm{C}}$$$ to the analytical $$$\phi_{\mathrm{C}}$$$. The concomitant phase effects are far smaller than the measured total phase. Broad agreement is apparent for the x-gradient and y-gradient; the
phase variation along the z-axis is replicated in $$$\hat\phi_{\mathrm{C}}$$$ and $$$\phi_{\mathrm{C}}$$$. Differences are apparent for the z-gradient due to undiagnosed
imaging artefacts, potentially due to susceptibility effects. Lee et al.9 use the system GIRF to
predict Maxwell terms for phase correction in image reconstruction. Essentially
their estimate of the Maxwell phase is the same as $$$\phi_{\mathrm{C}}$$$ shown here. We provide
experimental measurement $$$\hat\phi_{\mathrm{C}}$$$ which matches this prediction
well, suggesting that the MaxGIRF method (i.e. use of a linear GIRF plus
analytically calculated Maxwell and measured B0 terms) is a good
model for total phase variation in a lower field MR system.Conclusions
The
developed sequence and pipeline have shown potential for gradient
characterization and Maxwell field phase estimation at low field from the same
dataset. Going forward, these measurements can be used to improve the image
quality at 0.55T, especially for methods that are prone to gradient
imperfections. Acknowledgements
Daniel West and David Leitão contributed equally to this work. The research was
funded/supported by core funding from the Wellcome/EPSRC Centre
for Medical Engineering [WT203148/Z/16/Z] and by the National
Institute for Health Research (NIHR) Biomedical Research Centre based at Guy's
and St Thomas' NHS Foundation Trust and King's College London and/or the NIHR
Clinical Research Facility. The views expressed are those of the author(s) and
not necessarily those of the NHS, the NIHR or the Department of Health and
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