James L. Kent1, Ladislav Valkovič2,3, Iulius Dragonu4, Mark Chiew1,5,6, and Aaron T. Hess1
1Wellcome Centre for Integrative Neuroimaging, FMRIB, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, United Kingdom, 2Oxford Centre for Clinical Magnetic Resonance Research, John Radcliffe Hospital, University of Oxford, Oxford, United Kingdom, 3Department of Imaging Methods, Institute of Measurement Science, Slovak Academy of Sciences, Bratislava, Slovakia, 4Research & Collaborations GB&I, Siemens Healthcare Ltd, Camberley, United Kingdom, 5Department of Medical Biophysics, University of Toronto, Toronto, ON, Canada, 6Physical Sciences, Sunnybrook Research Institute, Toronto, ON, Canada
Synopsis
Keywords: Parallel Transmit & Multiband, Parallel Transmit & Multiband
Ultra-high
field MRI with parallel transmit offers significant advantages but B
1+
maps are required to utilize its potential. Acquiring B
1+ maps for each channel is time-consuming and limits the application of ultra-high field in clinical practice. In this abstract we present an approach to acquire full 3D
multi-channel B
1+ maps in 11 seconds. We do this by employing a time-interleaved acquisition of modes strategy using undersampled relative maps and two fast undersampled Sandwich B
1+ maps all reconstructed using TxLR, a
calibrationless reconstruction for transmit field maps. We demonstrate this approach with simulations and scans in phantom and in the brain.
Introduction
B1+
inhomogeneity is severe across the heart and large across the brain at 7T, limiting the utility of ultrahigh-field cardiac imaging. Parallel transmit (pTx) solves this problem but requires multi-channel B1+ maps which
are difficult to acquire in a clinically reasonable timeframe and are compounded
by issues of cardiorespiratory motion. An adaptation to the presaturation
TurboFLASH method1 of acquiring B1+ maps,
termed Sandwich, enables faster absolute maps2 that are less
sensitive to T1 and maintain flow-insensitivity. In this work we
combine three acquisition strategies, Sandwich, B1TIAMO3, and
relative transmit maps and reconstruct the data using transmit low rank
reconstruction (TxLR)4 to measure multi-channel B1+
maps. Our is aim to reduce the acquisition duration to a single breath-hold or 16
heartbeats. We evaluate the method using simulations, phantom and in vivo brain data.Methods
The proposed acquisition scheme
is shown in Figure 1. This includes three measurement sections: 1) an
undersampled 3D coil-cycled multi-channel relative transmit map, acquired using
a spoiled low flip angle gradient echo sequence, one image from each transmit
channel is acquired in an interleaved fashion, minimising the influence of
magnetisation history. 2) and 3) are 3D undersampled absolute maps with
complementary shim modes (CP+ and CP2+).
Simulations were performed
using retrospectively undersampled in-silico data to establish the achievable acceleration
and masking strategy. The in-silico data were generated in Sim4Life (3.4, ZMT) using a model of an 8-channel dipole array around DUKES heart,
channel-independent complex Gaussian noise was added to this data. K-space was
cropped to 24×24 phase encodes and
randomly undersampled using a Poisson disk distribution at rates of 1-16. The central 4×4 region of
k-space was maintained.
A 7 Tesla MRI (VB17,
Siemens Healthcare) equipped with parallel transmit was used for data acquisition. Data were measured
in a water phantom and in vivo brain of a healthy volunteer using an 8Tx/32Rx head coil (Nova Medical).
The 3D relative maps were acquired with TEGRE=1.31ms, TRGRE=3.2ms,
bandwidth=490Hz/px, FOV=(250mm)3, matrix=24×24×24,
resolution=(10.4mm)3, RF-spoiling, non-selective RF excitation FA=9°, and a total acceleration factor 6 with central
4×4 central region and a different undersampling mask for each transmit channel.
The 3D absolute maps were
acquired using the Sandwich2 scheme based on a TurboFLASH sequence,
TE=1.26ms, TR=3ms, bandwidth=490Hz/px, FOV=(250mm)3, matrix=24×24×24,
resolution=(10.4mm)3, RF-spoiling and total acceleration factor 6
(4×4 central calibration region) with non-selective RF excitation (β). A non-adiabatic
hyperbolic secant RF pulse was used as our presaturation (α) with nominal α/β
flip angles 90/4.5°, each volume
was acquired in 3 segments, each with 32 lines. This was repeated for two
acquisition modes, with the first mode preceded by two dummy TRs. The total
acquisition time was 8s (2 dummy TRs + 3 segments mode 1 + 3 segments mode 2).
Different undersampling masks were used for each shim mode, but the reference
and prepared images were acquired using the same mask, with centre-out
encoding. The total acquisition time to acquire both the relative and absolute
maps was 11 seconds.
The relative, reference and
prepared cartesian undersampled k-spaces were concatenated to form a
24×24×24×8×12 (Nkx×Nky×Nkz×NRx×NTx)
matrix and jointly reconstructed using the TxLR method4 sliced along
the readout direction. The k-space data were Hann filtered, zero-padded to 24×32×32
and fast Fourier transformed back to full image space. The receive channel
images were combined using sensitivity maps estimated using ESPIRiT5. Reconstruction
was performed offline in MATLAB (R2021a, MathWorks) on an Intel Xeon 28×2.40GHz
128Gb RAM computer. We compare a slice from our 3D maps to a 2D presaturation
TurboFLASH method which took 90 seconds to acquire.Results
Simulation
results from synthetic 8Tx/8Rx body images in Figure 2 show acceleration
factors up to 6 are achievable with a mean difference to the fully sampled of
<1°. Figure 3a shows the 3D dataset acquired in a phantom in 11 seconds. Figure
3b and 3c compares our 3D data to a fully sampled 2D dataset with the
difference in part d. Figure 4 shows similar data in the brain of one subject with
a mean absolute difference of 0.4°. Reconstruction
took 12 minutes.Discussion
Simulations
show that acceleration factors of 6 are comfortably achievable and higher are
possible. We found that using a small fully sampled region (4×4) aided the reconstruction allowing faster
reconstruction times and reduced RMSE, particularly for higher acceleration
factors, this also improved our in vivo results. The accelerated data appears
spatially smoother than the fully sampled images, indicating further
investigation of actual resolution is required. The main limitation currently is the 12 minute reconstruction time for the 3D datasets on our
hardware. Although we do not show any in vivo cardiac data, our simulations and brain work suggests that to acquire our accelerated 3D maps in
the heart would 8 heartbeats for relative mapping and 8 for absolute mapping, even taking into account the need for segmenting and gating the relative maps. In
principle, the two sequences can be acquired together in a single breath-hold
or in two subsequent breath-holds. Going forward we aim to apply this method in
the heart.Conclusion
We
obtain 3D
multi-channel absolute B1+ maps in the brain in 11
seconds for an entire transmit array with good accuracy to fully sampled
reference maps.Acknowledgements
JK
acknowledges the support of EPSRC through an iCASE award in collaboration with
Siemens Healthcare Ltd. The Wellcome Centre for Integrative Neuroimaging is
supported by core funding from the Wellcome Trust (203139/Z/16/Z). LV is funded
by a Sir Henry Dale Fellowship awarded jointly by the Wellcome Trust and the
Royal Society (221805/Z/20/Z) and also acknowledges the support of the Slovak
Grant Agencies VEGA (2/0003/20) and APVV (#19–0032). MC
is supported by the Canada Research Chairs Program.References
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