Zhe Wu1, Alexander Jaffray2, Lars Kasper1, and Kamil Uludag1,3
1Techna Institute, University Health Network, Toronto, ON, Canada, 2University of British Columbia, Vancouver, BC, Canada, 3Department of Medical Biophysics, University of Toronto, Toronto, ON, Canada
Synopsis
Keywords: Pulse Sequence Design, Diffusion/other diffusion imaging techniques, Spiral Imaging, field inhomogeneity correction, gradient correction
We propose a short-TE signal-to-noise ratio (SNR) enhanced diffusion imaging method using simultaneous multi-slice (SMS) accelerated spiral acquisition. The correction of field
inhomogeneity and gradient waveforms are introduced in the reconstruction without any assistance of
external hardware (e.g. field camera). Results showing the feasibility of this method on both phantom and human subjects, and the corrections of B0 and gradient waveforms are essential to improve the image quality.
Introduction
Diffusion
imaging has popular clinical and research applications, including but not
limited to brain development, stroke, and demylination. The traditional EPI-based
method is limited by the signal-to-noise ratio (SNR) and T2 blurring due to the long EPI
readout train. The spiral readout has a much shorter echo time (TE) over EPI and
has been proven with a higher SNR efficiency [1]. Previous studies have shown
that spiral acquisition is able to achieve a substantial reduction of echo time
and thus improve SNR for diffusion imaging [2]. In this study, we propose
using a simultaneous multi-slice (SMS) technique to accelerate the acquisition of
spiral diffusion images with field inhomogeneity and gradient waveforms
corrected without any assistance of external hardware (e.g. field camera).Methods
Trajectory designing: Figure 1 is
a demonstration of the spiral readouts for SMS 2 and SMS 3, together with their
k-space trajectories. We adopted the T-Hex shaped gradient blips [3] along the slice-selection
direction for encoding purposes, as we are using a 3D k-space approach [4] to
reconstruct all SMS slices. The purpose of the T-Hex blips is to reach a
near-uniform k-space density that leads to a near-optimal SNR efficiency and a
benign T2* effect.
Acquisition: The spiral diffusion sequence
was in-house developed, and all data were acquired on a Siemens 3T Prisma
scanner (Erlangen, Germany). Spiral diffusion images with SMS acceleration
factors of 2 were acquired on a phantom and a healthy subject (with approval of
REB), as well as the corresponding non-SMS spiral images. The common scanning
parameters are TR = 8000 ms, TE = 40 ms, in-plane FOV 220 mm, in-plane
resolution 2.6 mm, slice thickness 2 mm, b-values 0 and 700 s/mm2,
and 60 slices acquired. An additional dual-echo GRE dataset (TE 4.9/7.4 ms) was
acquired to calculate B0 and coil sensitivity maps.
Gradient Characterization: A
phantom-based method was used to measure and calculate the gradient impulse
response function (GIRF) with a modified GRE sequence including a gradient blip
before readouts with a slew rate of 180 T/m/s [5]. There were 18 blip amplitudes
(from 9 to 39.6 mT/m) included in the measurement of GIRF [6]. The measured GIRFs
on three gradient axis that were subsequently used for k-space trajectory
correction are shown in Figure 2A.
Image Reconstruction: A phase correction was
applied to the raw k-space signal to compensate for the shift from the iso-center
of the magnet [4]. All reconstructions of spiral images and the GIRF
corrections over the spiral readouts were implemented in Julia language, using
the open-source library MRIReco.jl [7] and ISMRM Raw Data [8] under a reconstruction
framework we previously proposed in [9] and is shown in Figure 2B. A nonlinear conjugate gradient solver
(CG-SENSE) including the B0 term was used for reconstruction. Results
Figure 3 illustrates the necessity of both field inhomogeneity
correction and gradient waveform compensations. Two slices from one slice group
of the SMS 2 spiral phantom images (b = 0) are used for this demonstration with
the non-SMS spiral images shown as the reference. The result demonstrates
that the B0 and gradient corrections are both essential for SMS spiral
acquisition: B0 correction recovers blurring and distortions on the area with
high field inhomogeneity (red arrows), while GIRF gradient correction
compensates the object position changes (e.g. rotation) due to the deviation
between nominal and actual k-space trajectories. After these corrections, the
image quality becomes nearly equivalent to the non-SMS cases.
Figure 4 shows the effect of B0 correction on one slice group of the human
subject with SMS 2 under b-value 0 and 700 s/mm2. All sub-images in
this figure went through GIRF correction. B0 correction helps recover the
blurring and artifacts in the region with significant field inhomogeneities.Discussion and Conclusion
This study demonstrated the feasibility of SMS acceleration over spiral
diffusion-weighted images using a 3D framework for reconstruction. The minimum
TR for SMS 2 acquisition was 4000 ms for 60 slices; the purpose of setting it
as 8000 ms was to match the contrast of non-SMS cases. On the other hand, the
spiral readout reduced TE dramatically: a protocol reaching a similar resolution
and b-value under EPI-based DWI acquisition (with echo train length reduced
through parallel imaging and partial Fourier) still need a TE > 70ms, while
our acquisition only needs 40ms.
Future investigations of this work include: (1) A higher SMS factor
would be desirable to further reduce the scanning time; (2) The diffusion weighting gradients may need to be included in GIRF calculation together with
the spiral gradients to compensate for its strong eddy current with long time coefficients;
(3) A multi-interleaved spiral acquisition would give a higher resolution;(4)
The validity of this spiral SMS diffusion imaging needs to be verified under
multiple diffusion models such as DTI, NODDI, etc.
In a conclusion, we
demonstrated the feasibility of SMS spiral acquisition and reconstruction for
diffusion imaging. The field inhomogeneity and gradient corrections are essential
to improve the image qualities, noting that no additional hardware is
needed for corrections during image reconstruction.Acknowledgements
The authors thank Dr. Johanna Vanesjo (Norwegian University of Science and Technology), Dr. Maria Engel (Cardiff University), and Dr. Gerald Moran (Siemens Healthineer) for their advice on this work.References
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