Harshan Ravi1, Samuel H. Hawkins1,2, Olya Stringfield3, Malesa Pereira1,4,5, Heiko Enderling6,7, H-H Michael Yu7,8, John A. Arrington5,7, Solmaz Sahebjam7,9,10, and Natarajan Raghunand1,7
1Moffitt Cancer Center and Research Center, Tampa, FL, United States, 2Department of Computer Science, Bradley University, Peoria, IL, United States, 3Quantitative Imaging Core, Moffitt Cancer Center and Research Institute, Tampa,, FL, United States, 4Behavioral and Community Health Sciences,, LSU Health School of Public Health, New Orleans, LA, United States, 5Department of Radiology, Moffitt Cancer Center and Research Center, Tampa,, FL, United States, 6Department of Integrated Mathematical Oncology, Moffitt Cancer Center and Research Institute, Tampa,, FL, United States, 7Department of Oncologic Sciences, University of South Florida, Tampa, FL, United States, 8Department of Radiation Oncology, Moffitt Cancer Center and Research Center, Tampa,, FL, United States, 9National Cancer Institute, National Institutes of Health, Bethesda, MD, United States, 10Department of Neuro-Oncology, Moffitt Cancer Center and Research Center, Tampa,, FL, United States
Synopsis
Keywords: Segmentation, Machine Learning/Artificial Intelligence, Glioblastoma, immunotherapy, radiotherapy
Confounding
appearance of radiographic changes in recurrent high grade glioma (HGG)
patients treated with multimodality immunotherapy presents a challenge to the
neuro-radiologist. A clinical need exists to improve upon conventional criteria for
assessment of GBM on standard-of-care (SOC; T1w, T2w, FLAIR, and T1w-enhanced)
MRI to help distinguish treatment-related effects from true disease progression. We have investigated the feasibility of intensity-based segmentation of
tumor tissue types on multiparametric MRI (mpMRI) to inform response assessment
in HGG patients treated with bevacizumab, hypofractionated
stereotactic radiotherapy, and pembrolizumab.
Introduction:
Glioblastoma
(GBM) is one of the most aggressive diseases, with an incidence rate is 3.21
per 100,000 persons1 and a 5-year survival rate of less than 10%2. Novel immunotherapeutics are being
investigated to treat GBM3-5.
Even as
immunotherapy-containing multimodality therapeutic regimens are investigated in
recurrent high-grade glioma (HGG), the challenge remains for the
neuroradiologist to make timely interpretations of MRI imaging findings
suggestive of disease progression, to prevent the premature termination of a
patient's participation in a potentially beneficial clinical trial. A clinical
need exists to improve upon conventional criteria for assessment of GBM on
standard-of-care (SOC; T1w, T2w, FLAIR, and T1w-enhanced) MRI to help
distinguish treatment-related effects from true disease progression. We have investigated
the feasibility of intensity-based segmentation of tumor tissue types on multiparametric
MRI (mpMRI) to inform response assessment in HGG patients treated with bevacizumab,
hypofractionated stereotactic radiotherapy, and pembrolizumab.Methods:
A
total of 32 recurrent high-grade glioma (HGG)
patients participated in a phase I clinical study of HGG treated with
immunoradiotherapy. The treatment and imaging study schema is shown in Figure
1. The patients were divided into 5 cohorts
for this imaging study (Table 1).
Preprocessing:
Intra- and inter-session registration was performed on SOC
and ADC images followed by intensity-calibratroin of SOC images using two
reference tissues (inset table in Figure 2)6.
mpMRI segmentation:
Calibrated intensity thresholds at each decision node were
iteratively adjusted, followed by the neuroradiologist's visual inspection of
the resulting tissue type maps to converge on the decision tree presented in
Figure 2. All pixels within a manually-defined VOI that were classified as contrast-enhancing
tumor (CE), blood vessel (BV), Edema1, Edema2, or Fluid tissuetypes were
combined into an "Abnormal Volume-of-Interest" (abVOI).
Linear regression model: Developed to relate the time remaining to
progression (TTP) at a particular scan date to the volumes of tissue types CE,
Edema1, Edema2, Edema1+Edema2, and Fluid within the abVOI, and time
elapsed since day 1 of cycle 1 of treatment (t_C1D1).
74-time points from cohort 1 were used in the training data, and the performance of the
trained model was tested on 46-time points in
Cohort 2. We have investigated each predictor's relative importance.
Model Performance: for predicting whether progression would occur within ≤30, ≤60, ≤90, or ≤120 days days following the scan date were computed as
follows: the entries of each cohort were labeled 1 if the TTP was within the
given threshold and 0 otherwise. The correctly identified labels on the true
and predicted TTP were quantified for each cohort using equation [1]
$$Accuracy_{threshold,cohort}=\frac{correctly identified labels for an interval threshold in a cohort}{total number of labels in a cohort} {[1]}$$Results:
Visual inspection of segmentation volumes:
Figure 3A) illustrates a representative patient's
co-registered mpMRI images and the corresponding tissue type map (color). Segmentations
of Gray matter (green), white matter (white), Fluid (blue), and vasculature
(red) in non-tumor areas and around the tumor are classified as CE (yellow) and
Edema2 (cyan), which aligns with the expectations of imaging signatures on
mpMRI images. Dynamic changes in the tissue type map across various time points
post-C1D1 in the same patient are shown in figure 3B. In this patient, the
pathologic areas of the brain are characterized primarily by Edema2 (cyan) tissuetype
through 168 days post-C1D1. The appearance of the enhancing tumor (CE, yellow) tissue
type is noticeable at 210 days post-C1D1, with a significant increase by 252
days post-C1D1 when radiologic progression was called. Figure 3C illustrates
temporal changes in volumes of tissuetypes within the abVOI across scan dates for
the same subject.
TTP Model
optimization and performance:
We
included six independent variables: the abVOI volumes of CE, Edema1, Edema2,
Edema1+Edema2, and Fluid tissue types, and t_C1D1 to train a linear regression
model to predict the time remaining to progression at each scan date (TTP). The
final form of the model, per the AIC criterion, optimized on the training data,
is given in Equation [2]:
$$TTP=209.98(–)0.87*(t_C1D1)(–)2.15*(CE)(+)4.52*(Edema1)(+)3.23*(FLUID)[2] $$
The
model had
a goodness-of-fit (R2)
for predicting TTP of 0.73 on training data, dropping to 0.46 on test data. Increases in t_C1D1 and CE volume were associated with
decreases in TTP (negative indicators for patient outcome), while increases in
Edema1 and Fluid volumes were weakly associated with increases in TTP (positive
indicators for patient outcome).
t_C1D1 (59%) and the CE volume (28%) contributed 87% to model R2.
The model's average accuracy was 80% across all analyzed subjects for
predicting progression within 30 days of a given scan date (Figure 4). Model accuracy for predicting progression within 30 days of
the scan date was comparable between the radiological and remote response
cohorts, suggesting that changes within the abVOI precede actual progression
outside the abVOI.
Conclusion:
We
show the feasibility of a linear regression model comprising 3 specific
tissuetype volumes computed off mpMRI acquired at a single scan date and t_C1D1
to predict TTP. The
model had reasonable goodness-of-fit on training (0.73) and testing data (0.46)
and predicted TTP with good accuracy (80%) within a 30-day time interval of a
given scan date.Acknowledgements
No acknowledgement found.References
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