Ahmad Algohary1, Evangelia I. Zacharaki1, Mohammad Alhusseini1, Adrian Breto1, Veronica Wallaengen1, Isaac Xu1, Sandra Gaston1, Patricia Castillo1, Sanoj Punnen1, Benjamin Spieler1, Matthew Abramowitz1, Alan Dal Pra1, Oleksandr Kryvenko1, Alan Pollack1, and Radka Stoyanova1
1The University of Miami, Miami, FL, United States
Synopsis
Keywords: Machine Learning/Artificial Intelligence, Prostate
In this work, we introduce a novel automated triple-reference
intensity normalization method for T2W images with the aim of obtaining
consistent longitudinal measurements leading to improved quantitative assessment
of radiation treatment outcome for prostate cancer patients.
Target audience
Radiation Oncologists,
Radiation Physicists, Imaging Scientists, and Radiologists.Objective
To
implement a T2-weighted MRI normalization technique for quantitative analysis
of longitudinal data following radiation therapy for prostate cancer patients.Introduction
Clinical protocols
for multiparametric-MRI (mpMRI) of the prostate do not include sequences for the
"natural" or "true" T2 estimation. Instead, the utilized T2-weighted (T2W) sequence is usually subject
to significant variations due to MRI instruments and coils used. In this work,
we introduce a novel automated triple-reference intensity normalization method
for T2W images with the aim of obtaining consistent longitudinal measurements
leading to improved quantitative assessment of radiation treatment outcome for
prostate cancer patients.Materials and Methods
The
overall procedure is illustrated in Figure 1. It consists of: (i) Training of a
Deep Learning (DL) network (using Dataset 1) to automatically segment three
structures on the T2W images of the pelvis; (ii) Evaluation of the proposed normalization
technique on an independent testing dataset (Dataset 2); and finally (iii) Applying
this normalization technique on longitudinal data from radiation treatment (RT)
clinical trial (Dataset 3) [1]. For the first step, a dual-stage MASK R-CNN DL
classifier [2,3] was trained to automatically segment three reference
structures, namely the femur, bladder, and the gluteus maximus (GM) muscle in a
multi-step methodology. This network was trained to detect these individual
structures on the T2W images and generate corresponding masks with an assigned
class to each segmented object (Figure 2a). The mean intensities of the segmented
regions were then calculated and used in a linear fit against reference values
in the three corresponding tissues (Figure 2b). The reference values for
femur, bladder and GM muscle were estimated as averages from a large reference cohort
of patients. This normalization procedure was tested on an independent 78-patient
dataset from 2 randomized clinical trials (ClinicalTrials.gov: NCT02242773 and
NCT02307058) and assessed in respect to correlation with Gleason Score. Finally,
the procedure was subsequently validated on longitudinal data from a RT clinical
trial (ClinicalTrials.gov: NCT01411319). Results
In
total, 182 mpMRI exams from 99 patients were analyzed. The average T2W intensities
in the bladder, femur and GM from the automatically segmented structures were
strongly correlated with manual contours in the testing dataset (R = 0.97 for
bladder and GM and R = 0.98 for femur). In the same dataset, after T2W normalization,
the T2W values expressed a more compact distribution and a significant negative
Spearman correlation with Gleason scores (p-value = 0.003) (Figure 3).
For the validation dataset (99 exams from 21 patients), normalization improved
the differentiation between gross tumor volumes (GTV) versus
naturally-appearing tissue within the peripheral (NAT-PZ) and transitional (NAT-TZ)
zones of the prostate (Figure 4). Conclusion
An
automated triple-reference tissue normalization method was developed. This
method successfully reduced the inter-scan intensity variation on T2W MR images
of the prostate due to artifacts caused by different scanning conditions and
magnets. It also improved the discrimination between tumors and normal tissue.
In addition, it exhibited significant Gleason score-based risk stratification
power and consequently improved the quantitative assessment of prostate cancer
on MRI.Acknowledgements
This research was funded by
National Cancer Institute of the National Institutes of Health. Award Numbers are P30CA240139, RO1CA189295, R01CA190105 and U01CA239141.
The content is solely the
responsibility of the authors and does not necessarily represent the official
views of the National Institutes of Health.References
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