Jörn Huber1, Laurent Ruck2,3, Matthias Günther1,4,5, Armin Nagel2,6, and Simon Konstandin1,4
1Fraunhofer Institute for Digital Medicine MEVIS, Bremen, Germany, 2Institute of Radiology, University Hospital Erlangen, Erlangen, Germany, 3Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Erlangen, Germany, Erlangen, Germany, 4mediri GmbH, Heidelberg, Germany, 5Faculty 1 (Physics/Electrical Engineering), University of Bremen, Bremen, Germany, 6Division of Medical Physics in Radiology, German Cancer Research Center (DKFZ), Heidelberg, Germany, Erlangen, Germany
Synopsis
Keywords: Image Reconstruction, Myocardium
Motion
correction in interleaved 23Na/1H MRI of the human heart is important to
improve the diagnostic reliability of reconstructed images and derived
quantitative parameters. Therefore, this work demonstrates and compares the
application of different reconstruction techniques to undersampled and
motion-gated 23Na/1H MRI data at 7 T.
Introduction
23Na concentration can be an important indicator for cell viability, making 23Na MRI a promising technique for
providing additional diagnostic information about dysfunctional myocardium1,2.
However, low signal-to-noise ratio (SNR) requires additional high-resolution 1H
images for segmentation of cardiac compartments and partial volume correction
which prolongs scan time. This limitation can be overcome by an interleaved density-adapted radial 23Na/1H sequence
scheme which enables the acquisition of cardiac 23Na and 1H images within a
single scan. However, since typical scan times are in the range of minutes,
interleaved 23Na/1H imaging still requires robust compensation of respiratory
and cardiac motion prior to further analysis. Motion compensation can be
accomplished by retrospective gating of acquired 23Na/1H projections. Reconstructed images from gated data however often suffer from low quality due to streaking
artifacts arising from high undersampling factors. The BART toolbox3 offers
a variety of algorithms, designed for artifact-free reconstruction of
undersampled MRI data. To this aim, we evaluate different reconstruction
techniques applied to motion-gated 23Na/1H MRI data to derive
the optimal setup for future applications.Methods
23Na and 1H images were reconstructed
from data which were acquired using a dual-nuclear interleaved sequence with a
density-adapted 3D radial readout scheme4,5. The interleaved sequence
scheme allows to acquire four 1H projections within a single 23Na TR, thus being
especially time efficient. Related sequence parameters are given in Fig. 1. In
the given scenario, 15,000 23Na and 60,000 1H projections were acquired following
a 3D golden angle scheme, which enables respiratory and cardiac gating. 1H data
were acquired using a sixteen channel receive coil, enabling parallel imaging
reconstruction while 23Na data were acquired using a single channel only.
Acquired 23Na/1H data
were reconstructed according to Figure 2a. 1H projections were used for retrospective
respiratory and cardiac gating. Two motion states were defined for each type of
motion, resulting in a total number of four motion bins. PCA-based analysis of
the k-space center signal of every fourth 1H projection was used to define the
motion states of the three preceding 1H projections and the preceding 23Na projection
(cf. Fig. 2b).
To evaluate
optimal image reconstruction technique, different reconstruction mechanisms
from the BART toolbox were applied to the gated 23Na/1H data. First, gridding
reconstruction of motion-gated 23Na/1H images was applied in combination with
pre-/post-density compensation, followed by a sum-of-squares coil combination
(in case of multi-channel 1H data). Furthermore, parallel imaging
reconstruction techniques were tested on 1H data due to the multi-channel
readout. Therefore, all non-gated 1H projections were first used to reconstruct
3D low-resolution images (40x40x40 voxels) of individual coils which were used
to estimate coil sensitivity profiles using different algorithms (cf. Fig. 2c).
The different calibration commands are given in Fig. 1b and the calibration technique,
yielding the best image quality, was further used to assess the effect of
different regularization terms during the image reconstruction process.Results
Estimated sensitivity profiles and their
respective effects on 1H image reconstruction are shown in Fig. 3. Individual
reconstructed 1H images using ESPIRiT reconstruction6 with different L2 regularization
weights are compared to standard gridding reconstructions in Figure 4. Figure 5
finally compares reconstructed motion-gated 23Na/1H images using gridding only
(23Na)/gridding and ESPIRiT reconstructions (1H).Discussion
The calibration of 1H coil
sensitivity maps showed to have a direct impact on the resulting image quality.
Here, the ESPIRiT calibration showed a reduction of artifacts (cf. arrows in
Fig. 3) when compared to the other methods and was thus applied during the following
parallel imaging reconstructions. The standard gridding reconstruction with
pre-density compensation resulted in sharp 1H images with residual streaking
artifacts, appearing in a noise-like fashion (cf. Fig. 4). Post-density
compensation appears to reduce noise-like streaking artifacts at the cost of reduced sharpness.
Strong L2 regularization resulted in strong image blurring and is thus not
recommended. In comparison, the ESPIRiT reconstruction further enhances the signal in the heart region (cf. Fig. 4 arrows) but also shows a loss in detail
structures, especially at higher L2 regularization factors. In general, it
appears that L2 regularization has no benefits for the image reconstruction
applied in this work. The same trend
shows when comparing gridding and ESPIRiT reconstructions for 1H data in Fig.
5. In case of 23Na data, the gridding routine with post-density compensation
seems to be beneficial for reduction of noise-like artifacts. However, it should be investigated whether the same can be achieved using additional filter operations
(e.g., Hanning) in case of gridding with pre-density compensation. It should also
be mentioned that the presented data suffers from severe B1 inhomogeneity which
results in signal loss in structures distant to the transmit coils. Parallel
transmit techniques could therefore be beneficial to homogenize the signal
intensity.Conclusion
This work evaluated reconstruction
algorithms from the BART toolbox in combination with interleaved and
motion-gated 1H/23Na MRI data. A combination of ESPIRiT reconstruction of 1H
data and gridding reconstruction with post-density compensation of 23Na data
can be recommended to reduce the noise in final images. However, future work must
investigate, whether similar or better results can be achieved using gridding
alone with additional filter operations or other reconstruction frameworks such
as XD-GRASP7.Acknowledgements
This
project was funded by the Deutsche Forschungsgemeinschaft (DFG) under project number
449552397.References
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