Tomasz Pieciak1, Guillem París1, Dani Beck2,3,4, Ivan I. Maximov3,5, Antonio Tristán-Vega1, Rodrigo de Luis-García1, Lars T. Westlye2,3,6, and Santiago Aja-Fernández1
1ETSI Telecomunicación, Universidad de Valladolid, Valladolid, Spain, 2Department of Psychology, University of Oslo, Oslo, Norway, 3NORMENT, Division of Mental Health and Addiction, Oslo University Hospital & Institute of Clinical Medicine, University of Oslo, Oslo, Norway, 4Department of Psychiatric Research, Diakonhjemmet Hospital, Oslo, Norway, 5Department of Health and Functioning, Western Norway University of Applied Sciences, Bergen, Norway, 6KG Jebsen Centre for Neurodevelopmental Disorders, University of Oslo, Oslo, Norway
Synopsis
Keywords: White Matter, Diffusion/other diffusion imaging techniques
Diffusion kurtosis imaging (DKI) allows quantifying Gaussian and non-Gaussian effects in diffusion MRI signal and has already proved its relevance, including assessing age-related brain alterations. Hitherto, the standard DKI follows a single-component signal representation with no explicitly defined free-water factor that might lead to a reduced specificity of tensor-based measures. This work demonstrates the free-water corrections to the DKI and revisits the variations in the metrics across the adult lifespan. Our study shows a significant reduction in variability and dynamics of the kurtosis fractional anisotropy and the preservation of the
status quo in the mean kurtosis tensor with age.
Introduction
The higher-order cumulant expansion of the diffusion MRI signal allows depicting of non-Gaussian effects of the signal1,2 intrinsically concealed within the standard Diffusion Tensor Imaging (DTI). Diffusion kurtosis imaging (DKI) is the common approach used to reveal such deviations from Gaussian diffusion2-5 with diverse clinical applications in the characterization of neural tissues6,7,8 and the evaluation of lifespan variations of the brain white matter (WM)9-12. However, the DKI signal representation is vulnerable to the partial volume effect caused by the free-water component13-15 that reflects the signal contribution from the cerebrospinal fluid and interstitial fluid in the extracellular space of the WM13. This work demonstrates the endeavours to correct the DKI-related measures for the free-water volume fraction (FWVF) and revisits the variations in kurtosis tensor-based measures across the adult lifespan.Materials and methods
Sample population and data acquisition: The sample population included $$$ N = 287$$$ healthy subjects (178F/109M) aged 25-94 with no alcohol or drug addictions. The participants were scanned using a 3T General Electric Discovery MR750 scanner (GE, Waukesha, WI) using an EPI sequence with the parameters: TR=8150 ms, TE=83.1 ms, voxel size $$$2\times 2\times 2 \ \text{mm}^3$$$, $$$b\in\{1000,2000\} \ \text{s}/\text{mm}^2$$$ with $$$\{60,30\}$$$ uniformly distributed diffusion gradients respectively and 17 non-diffusion-weighted scans.
Data preprocessing: The diffusion MRI (dMRI) data underwent a standardized preprocessing pipeline16: noise removal17, Gibbs artifacts correction18, susceptibility-induced and eddy current distortions correction with the FSL topup tool (Analysis Group, FMRIB, Oxford, UK), followed by a quality assessment procedure19.
FWVF and DKI estimation: The FWVF parameter, $$$f$$$, was estimated from two-shell dMRI data using the spherical means approach14 and orientationally-averaged signals via the spherical harmonics decomposition at the order of $$$L=6$$$ and Laplace-Beltrami20 regularization with $$$\lambda=0.001$$$.
The FW-corrected DKI was modeled with the following two-component signal representation:$$ \frac{S(b,\mathbf{g})}{S(0)}=(1-f)\exp\left(-b \sum_{i,j=1}^3g_ig_jD_{ij}+\frac{b^2}{6}\left( \frac{1}{3}\sum_{i=1}^3 D_{ii}\right)^2\sum_{i,j,k,l=1}^3g_ig_jg_kg_lW_{ijkl}\right)+f\exp(-bD_f), $$
where $$$\mathbf{g}=[g_1,g_2,g_3]$$$ is the gradient direction, $$$D_{ij} $$$ are the second-order tensor entries, $$$W_{ijkl}$$$ are the fourth-order tensor (symmetric diffusion kurtosis tensor) elements, $$$D_f=3.0\times 10^{-3} \ \text{mm}^2/\text{s}$$$ is the apparent diffusion coefficient (a fixed value) of FW under a temperature of 37$$$^\circ$$$, and $$$f\in [0,1]$$$ is the pre-estimated FWVF.
The tensors were estimated via the weighted least squares (WLS) approach4 under two variants, namely a standard DKI with no FW assumption (i.e. $$$f=0$$$; hereafter referred to as the “Standard DKI”) and under a FW-corrected scenario with the observation vector $$ \mathbf{S} = \left[\frac{S(b,\mathbf{g}_1)-f\exp(-b_1 D_f)}{1-f}, \ldots, \frac{S(b,\mathbf{g}_n)-f\exp(-b_n D_f)}{1-f}\right]^T,$$
where $$$b_k$$$ is the b-value coupled with $$$\mathbf{g}_k$$$. We calculated two kurtosis tensor-based measures: kurtosis fractional anisotropy (KFA) and mean kurtosis tensor (MKT).
Data registration and regions of interest retrieval (ROIs): The DTI-based fractional anisotropy estimated at $$$b=1000 \ \text{s}/\text{mm}^2 $$$ via the WLS was non-linearly registered to the FSL template FMRIB58_FA. The ROIs were retrieved for each subject by inversely warping the labels from the JHU WM atlas21 to the subject’s native spaces.
Statistical analysis: The lifespan variations in DKI parameters are modeled using the quantile regression (QR) framework22,23 via the second-order polynomial as the function of the explanatory variable $$$Age$$$
$$Q(\tau|Age)=\beta_0+\beta_1Age+\beta_1Age^2 \ \ \ \text{with} \ \ \ \beta_l \in \mathbb{R}, $$ while the alterations in the DKI measures as a function of the FWVF $$$f$$$ are patterned with the first-order model$$ Q(\tau|f) = \beta_0 + \beta_1 f \ \ \ \text{with} \ \ \ \beta_l \in \mathbb{R} $$with $$$Q(\tau|\cdot)$$$ being the quantile function estimated under a fixed quantile $$$\tau$$$.Results
- Fig.1 visually inspects the FWVF and kurtosis tensor measures estimated under standard and FW-corrected variants. We observe a notable increase in the KFA under a FW-corrected scenario compared to the standard DKI.
- Fig.2 presents the adult lifespan variations in the KFA/MKT. We recognize 1) increased (decreased) FW-corrected KFA (MKT) values, 2) reduced dynamics of the FW-corrected KFA compared to the standard equivalent, and 3) the preservation of the status quo in the MKT trend.
- Fig.3 illustrates population density plots over seven age intervals, each contrasting the dynamics of standard versus FW-corrected KFA/MKT.
- Fig.4 shows the measures as a function of the FWVF. We observe 1) the correlations between the FW-corrected KFA and the FWVF are weaker, 2) the slopes for the FW-corrected KFA under $$$\tau=0.5$$$ become non-significant in most cases.
- Fig.5 shows the histograms of two kurtosis tensor components.
Discussion and conclusions
This paper studies the effect of the FW correction on the kurtosis tensor-based measures and its implications on the variations of the measures across the adult lifespan, leading to the following conclusions:
- The inclusion of the FWVF in the DKI estimation procedure reduced age-related variations reflected in decreased $$$R^1$$$ and inter-subject variabilities of the KFA (Fig.2), and population density plots (Fig.3). The dependency of the FW-corrected KFA on the FWVF has been significantly diminished, leading to non-significant correlations in the regions considered in the study (Fig.4). This suggests that the FWVF might be one of the factors causing the lifespan alterations in the KFA.
- The KFA exhibits a reduced heteroskedastic effect (i.e. the functional dependence of the variance with age; Fig.2). This effect is adequately modeled in the QR framework22,23, which does not assume the underlying statistical data properties.
- The MKT results suggest that the FWVF shifts the kurtosis tensor's trace negatively (Fig.4, Fig.5).
Acknowledgements
Tomasz Pieciak, Guillem París, Antonio Tristán-Vega, Rodrigo de Luis-García and Santiago Aja-Fernández acknowledge Ministerio de Ciencia e Innovación Gobierno de España with research grants PID2021-124407NB-I00 and TED2021-130758B-I00. Tomasz Pieciak acknowledges the Polish National Agency for Academic Exchange for grant PPN/BEK/2019/1/00421 under the Bekker programme and the Ministry of Science and Higher Education (Poland) under the scholarship for outstanding young scientists (692/STYP/13/2018). Guillem París was funded by the Consejería de Educación de Castilla y León and the European Social Fund through the “Ayudas para financiar la contratación predoctoral de personal investigador - Orden EDU/1100/2017 12/12” program. The study is supported by the Research Council of Norway (223273, 249795, 298646, 300767), the South-Eastern Norway Regional Health Authority (2014097, 2019101), the Norwegian ExtraFoundation for Health and Rehabilitation (2015/FO5146), KG Jebsen Stiftelsen, and the European Research Council under the European Union's Horizon 2020 research and Innovation program (ERC 802998).References
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