Ke Dai1,2, Zhiyong Zhang2, and Lucio Frydman1,3
1Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot, Israel, 2School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China, 3Azrieli National Center for Brain Imaging, Weizmann Institute of Science, Rehovot, Israel
Synopsis
Keywords: Pulse Sequence Design, New Trajectories & Spatial Encoding Methods
Single-shot cross-term SPatiotemporal ENcoding (xSPEN) is a
single-shot approach to MRI with exceptional resilience to field inhomogeneities.
xSPEN’s non-Fourier nature and sinc-like point-spread function demands
SNR/resolution compromises which, so far, no post-processing has managed to
solve. This study shows that introducing a quadratic phase modulation in
conjunction with the hyperbolic phase modulation demanded by xSPEN can solve
this, enabling the use of deconvolution principles providing resolution
enhancement. The principles and examples of the ensuing quadratic xSPEN
(QxSPEN) experiment, are presented on synthetic, phantom and human brain
single-shot data.
Introduction
Spatiotemporal
encoding (SPEN)1,2 and cross-term SPEN (xSPEN)3,4 are
single-shot 2D MRI protocols designed to alleviate EPI’s complications along
the phase encoding dimension. xSPEN in particular has exceptional resilience to
field inhomogeneities, enabling for instance single-shot acquisitions in
clinical scanners in the presence of metallic implants.3 Like SPEN, xSPEN
is a non-Fourier approach imaging the object directly in a spatial (y)
domain; unlike SPEN, however, we have not found a way to “super-resolve” xSPEN data5,6
–thereby paying a full $$$\sqrt {{\text{FOVy/}}\Delta {\text{y}}} $$$ penalty in its image’s SNR. This reflects
xSPEN’s $$${e^{iC}}^{(y - yo)z}$$$ modulation, which when unraveled by a kz
wavenumber leads to a sinc-like imaging point spread function (PSF). Sincs
have sharp low-passing effects stopping all high-frequency information which
could enhance a voxel resolution, meaning the only way to enhance xSPEN’s resolution
is by narrowing its $$$\Delta y$$$ –further decreasing sensitivity, while enhancing SAR. This work introduces a
way of bypassing these limitations without giving up on xSPEN’s unique
robustness, involving the application of a quadratic phase-modulation $$${e^i}^{C(y - yo)2}$$$ on top
of xSPEN’s modulation. Breaking the $$$sinc$$$ PSF enables high-frequency components
to come in, opening a route to a super-resolution deconvolution reconstruction
where improved xSPEN SNR arises without losing resolution. Ways to implement
these new QxSPEN experiments and to process their data are presented.Methods
Figures 1a and 1b illustrate the SPEN and xSPEN single-shot imaging
sequences. It follows from the modulations associated with these sequences that
their respective signals will be
$${S_{SPEN}}\left( {{k_y}} \right) = \int {\rho \left( y \right){e^{i2\pi \left( { - C{{\left( {y - {y_o}} \right)}^2} + {k_y}y} \right)}}dy} \;\; \to \;\rho \left( y \right)\; \otimes \;{e^{i\beta {y^2}}}\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;(1)$$$${S_{xSPEN}}\left( {{k_z}} \right) = \int {\int {\rho \left( y \right){e^{i2\pi \left( { - {C^\prime }\left( {y - {y_o}} \right)z + {k_z}z} \right)}}dzdy} } \;\; \to \;\rho \left( y \right)\; \otimes \;sinc\left( {\alpha y} \right)\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;\;(2)$$where $$$\beta $$$ is related to C and ky, $$$\alpha $$$ to $$$C'$$$ and kz, and $$$ \otimes $$$
represents a convolution. In general, xSPEN’s
resolution/sensitivity will depend on the $$$sinc$$$’s $$$\alpha $$$, and there is no way to
improve one without degrading the other. As the $$${e^{i\beta {y^2}}}$$$ does not have the low-pass characteristics of $$$sinc\left( {\alpha y} \right)$$$, we alleviate this by introducing the quadratic +
hyperbolic phase modulation shown in Fig. 1c. This QxSPEN variant combines xSPEN’s
Gz readout defining the convolving kernel’s amplitude, with SPEN’s
readout affecting the phase of this convolution. QxSPEN’s signal can be
summarized as:$${S_{QxSPEN}}\left( {{k_y},{k_z}} \right) = \;\int {\int {{e^{i2\pi \left[ {\left( { - {C^\prime }\left( {y - {y_o}} \right) + {k_z}} \right)z} \right]}}dz} \;\rho \left( y \right)\;{e^{i2\pi \left[ { - C{{\left( {y - {y_o}} \right)}^2} + {k_y}y} \right]}}} dy \to \;\rho \left( y \right)\; \otimes \;[\;sinc\left( {\alpha y} \right) \cdot {e^{i\beta {y^2}}}\;](3)$$
It follows that a deconvolved (i.e., super-resolved) image $$$\rho (y)$$$ can be obtained from the acquired signal by dividing
$$${\mathscr F}\left\{ {{S_{QxSPEN}}} \right\}$$$ by $$${\mathscr F}\left\{ {sinc\left( {\alpha y} \right) \cdot {e^{i\beta {y^2}}}} \right\}$$$ –accompanied if needed by a regularization– followed by an inverse
FT.
To demonstrate this concept, simulations as well as phantom and
in vivo experiments were executed with different convolution kernels, and
processed accordingly. In vivo data were acquired following ethical approval
and consent on human brains at 3T on a Siemens Prisma scanner using a 32-channel
head coil. Acquisitions included single-shot EPI, xSPEN
and QxSPEN with TR=2s, 230x230 mm2 FOV, 4mm slice
thickness, 64x64 image matrix size. Additional QxSPEN parameters included $$$\alpha = 0.22,\;0.15,\;0.17,\;0.12$$$ and $$$\beta = - 0.02,\; - 0.02,\; - 0.02,\; - 0.01$$$ .
Results and Discussion
Figure 2 shows simulated SPEN, xSPEN and QxSPEN results for
their different convolution kernels, together with their deconvolutions and
with the “ground truth”. SPEN’s kernel is clearly amenable to deconvolution,
whereas xSPEN’s $$$sinc$$$ kernel results in a narrowband rectangle-like low-pass
k-space filter. Dividing by it amplifies high-frequency components by ≈0
denominators, ruining the deconvolution. Adding QxSPEN’s quadratic phase kernel
solves this problem, leading to a good recovered image.
Figure 3 compares EPI, SPEN and QxSPEN images of a reticular
phantom –the latter two collected with different $$$\alpha $$$ and $$$\beta $$$ parameters. Shown underneath the xSPEN and QxSPEN data are the
expected deconvolutions. Once again, the improvement in resolution for QxSPEN
is evident.
Figure 4 shows a similar set of comparisons, but for two in
vivo brain slices (only deconvolved QxSPEN data now shown). Notice xSPEN’s
avoidance of the distortions affecting EPI’s frontal region, which is well
preserved by QxSPEN, as well as the resolution improvement brought by the
latter’s deconvolution.
Conclusions
A new sequence enabling the deconvolution of xSPEN single shot
images by the addition of a quadratic phase, was introduced and demonstrated.
The ensuing QxSPEN is capable of improving in-plane resolution without
degrading the SNR; additional features are under investigation.Acknowledgements
We are grateful to Drs. Sagit
Shushan, Amir Seginer and Edna Furman-Haran for assistance with the human experiments.
This work was supported by the Minerva, Israel Science Foundations and National Natural Science Foundation of China (No. 62001290). KD
acknowledges fellowships from Israel’s Planning
and Budget Committee. LF heads the Clore Institute for High-Field Magnetic Resonance
Imaging and Spectroscopy, whose support is also acknowledged.References
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