Stephane Loubrie1, Ana Rodriguez-Soto1, Tyler Seibert1,2,3, Michael Hahn1, Vandana Dialani4,5, Catherine Wei6, Zahra Karimi4, Joshua Kuperman1, Anders Dale1,7, Etta Pisano4,8, Jingjing Zou9, and Rebecca Rakow-Penner1,3
1Radiology, University of California, San Diego, San Diego, CA, United States, 2Radiation medicine, University of California, San Diego, San Diego, CA, United States, 3Bioengineering, University of California, San Diego, San Diego, CA, United States, 4Radiology, Beth Israel Hospital, Boston, MA, United States, 5Harvard Medical School, Boston, MA, United States, 6Commonwealth Radiology Associates, Boston, MA, United States, 7Neurosciences, University of California, San Diego, San Diego, CA, United States, 8American College of Radiology, Reston, VA, United States, 9Biostatistics, Herbert Wertheim School of Public Health and Human Longevity Science, University of California, San Diego, San Diego, CA, United States
Synopsis
Keywords: Breast, Diffusion/other diffusion imaging techniques
Diffusion weighted imaging (DWI) holds great
potential in improving specificity of findings detected on contrast enhanced
breast MRI. Restriction spectrum imaging (RSI), an advanced diffusion imaging
model, has potential in discriminating between malignant and fibroglandular
breast tissue. In this abstract, we evaluate RSI’s performance, combined with a
random forest model, in differentiating lesions requiring biopsies from lesions
that do not. The model showed significant preliminary results.
Introduction
Breast cancer MRI
screening protocols include dynamic contrast-enhanced (DCE) imaging for lesion
detection and assessment. DCE has variable specificity (61-97%)1, requiring
biopsies for final diagnosis. Diffusion-weighted imaging (DWI) is now often
part of cancer screening protocols, aiming at improving specificity. Minimizing
unnecessary biopsies is a challenge with both clinical and economic
implications. DWI is widely used, but more advanced models such as restriction
spectrum imaging (RSI) aim to separate signal components in different degrees
of diffusion (free, hindered and restricted). An RSI breast-specific model was
developed on cancers greater than 2cm in size2, and has
shown potential in distinguishing cancers from healthy tissue3, but also in
discriminating cancers from benign lesions4. In this
study, we explore and evaluate the performance of the RSI outputs with a random
forest model as a potential breast lesion predictor on a prospective study,
performed on a breast cancer screening cohort.Methods
Women were recruited in two cohorts
from a screening population– after screening mammography interpreted as BIRADS-0 with subsequent diagnostic work-up leading to the recommendation for biopsy
or undergoing routine screening MRI due to high-risk status. A total of 187 women were prospectively scanned, of which 72 had at least
either one malignant or one benign lesion and corresponding RSI data. A total
of 89 lesions were identified. Lesions were then separated as 41 average-risk
lesions (ARL), 13 high-risk lesions (HRL) and 35 cancers (CL). All lesions were assessed via core needle biopsy.
Data were collected using a 3.0T wide-bore
(Discovery MR750w,
GE Healthcare, USA) and an 8-ch Sentinel breast coil. Reduced field-of-view
(FOV) DW-MRI and DCE were collected. DW-MRI data were processed using Matlab
(R2017a, Mathworks, USA) and were distortion corrected using the reverse
polarity gradient (RPG) method5, followed by noise and eddy current
corrections. Finally, datasets were normalized by the 98th percentile of the b= 0 s/mm2 images. Pre-processed data of all
patients were fit to the breast RSI model2 to generate signal contribution maps
of components C1, C2, C3:
$$ S(b) = C_1 + C_2e^{-b×1.4×10^{-3}} + C_3e^{-b×10.3×10^{-3}} $$
The outputs are hypothesized to
correspond to cancer and fatty tissue (C1), fibroglandular tissue (C2),
and vascular flow (C3), respectively. The square root of C1C2
was calculated, as well as the ratio
$$$ \frac{C_1C_2}{C_3}$$$
(and divided 10-fold to better account for
scaling) from Ci values in each ROI. All lesions
were 3D-delineated using ITK-SNAP6 under the
supervision of a radiologist, based on suspicious findings detected on
DCE-imaging corresponding to biopsied tissue. Control ROIs were drawn in
healthy fibroglandular tissue, while avoiding any breast lesion, once for each
patient that had at least one biopsied lesion.
A random forest model was fit to the
data, with the outcome as the type of lesion: control (healthy), ARL, HRL, and CL,
and the predictors of interest include C1, C2, C3,
square root of C1C2, and $$$ \frac{C_1C_2}{10C_3}$$$
. The control and ARL types were combined into one
type as no biopsy is required for both types, while HRL and CL were combined as
they both require biopsy and close follow-ups and treatment/surgery.
The
data of lesions were randomly split into a training set (90% of lesions) and a
set-apart test set (10% of lesions). Then a random forest model was fit to the
training set only without using data from the test set. Parameters in the
random forest model were determined using a 5-fold cross validation. The model
trained with only the training set was then applied to the test set.Results
The prediction with regrouped
population (control + ARL vs HRL + CL) accuracy is 85% with 95% CI: (79%, 91%)
in the training set and 0.76 with 95% CI: (50%, 93%) in the test set. Classification
results are shown in confusion matrices in Table 1.Discussion
In this study, we propose a random
forest model for breast lesion classification. Preliminary results have
demonstrated potential in improving diagnostic specificity, especially when
regrouping lesion in two groups “no biopsy required” (control + ARL) versus
“biopsy required” (HRL + CL). Minimizing unnecessary biopsies is crucial for
patient care, and a high-performing model would help reduce unnecessary
procedures for patient and health care expenses.
Next steps to improve the model will start
with including more lesions in the dataset, especially high-risk lesions as there
are fewer (only 13 compared to 41 ARL and 35 CL). With optimal sample size, a
more comprehensive analysis will be performed, including optimizing data
partitioning for model training.
Finally, the model would benefit from
better, high-resolution DWI acquisitions. Parallel-imaging techniques, such as
multi-slice excitation, could help improve through-plane resolution and provide
better datasets for model training.Acknowledgements
No acknowledgement found.References
1. Kriege
M, Brekelmans CTM, Boetes C, et al. Efficacy of MRI and mammography for
breast-cancer screening in women with a familial or genetic predisposition. N
Engl J Med. 2004;351(5):427-437. doi:10.1056/NEJMoa031759
2. Rodríguez-Soto AE, Fang LK, Holland
D, et al. Correction of Artifacts Induced by B0 Inhomogeneities in Breast MRI
Using Reduced-Field-of-View Echo-Planar Imaging and Enhanced Reversed Polarity
Gradient Method. J Magn Reson Imaging. 2021;53(5):1581-1591.
doi:10.1002/jmri.27566
3. Andreassen MMS, Rodríguez-Soto AE,
Conlin CC, et al. Discrimination of Breast Cancer from Healthy Breast Tissue
Using a Three-component Diffusion-weighted MRI Model. Clin Cancer Res.
2021;27(4):1094-1104. doi:10.1158/1078-0432.CCR-20-2017
4. Besser AH, Fang LK, Tong MW, et al.
Tri-Compartmental Restriction Spectrum Imaging Breast Model Distinguishes
Malignant Lesions from Benign Lesions and Healthy Tissue on Diffusion-Weighted
Imaging. Cancers. 2022;14(13):3200. doi:10.3390/cancers14133200
5. Holland D, Kuperman JM, Dale AM.
Efficient correction of inhomogeneous static magnetic field-induced distortion
in Echo Planar Imaging. NeuroImage. 2010;50(1):175-183. doi:10.1016/j.neuroimage.2009.11.044
6. Yushkevich
PA, Piven J, Hazlett HC, et al. User-guided 3D active contour segmentation of
anatomical structures: significantly improved efficiency and reliability. NeuroImage.
2006;31(3):1116-1128. doi:10.1016/j.neuroimage.2006.01.015