Bastien Milani1, Christopher Roy1, Jean-Baptist Ledoux1, David C. Rotzinger1, Salim Si-mohamed1,2,3, Ambra Masi1, Jerome Yerly1,4, Tobias Rutz1, Milan Prsa1, Jurg Schwitter1, and Matthias Stuber1,4
1Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Lausanne, Switzerland, 2INSA-Lyon, CNRS, Inserm, CREATIS, Université de Lyon,, Villeurbanne, France, 3Louis Pradel Hospital, Hospices Civils de Lyon, Bron, France, 4Center for Biomedical Imaging (CIBM), Lausanne, Switzerland
Synopsis
Keywords: Heart, Cardiovascular, ejection fraction
We present in this
work a 3D-CINE whole-heart reconstruction that we developed for free-running 3D‑radial
fully self-gated acquisitions. The reconstruction is compressed-sensing-based
with temporal-total-variation (tTV) regularization, which is known to corrupt
or compress motion and to blur moving structures. In order to solve these
drawbacks, we regularize by an improved tTV equal to the one-norm of the sum of
the motion-corrected-residuals between adjacent frames. While this strategy has
already been applied for various trajectories, it has never been applied for
3D-radial in free-running. In this study, we demonstrate quantitatively and
qualitatively that this strategy in fact improves image quality.
Background
Cardiac motion-resolved images acquired with 3D-radial free-running
MRI sequences promote a high degree of sparsity in the difference between
adjacent frames, that lends itself to compressed-sensing (CS) with
temporal-total-variation (tTV) regularization. In order to solve motion-related
problems inherent to tTV regularization, such as movement compression and
blurring of structures, CS-reconstruction including
deformation-fields in the tTV-regularization term have been implemented [1]–[6],
[7], [8]. However, untapped
potential remains in that it has not been exploited for 3D-radial free running
data. We implemented such a solution and tested the hypothesis that image
quality can thus be further improved. Moreover, we show that the ejection
fraction (EF) can be accurately measured on our reconstructed images. Methods
Fully self-gated data were acquired with a 3D-radial free-running
gradient echo sequence after injection of 2mg/kg dose of ferumoxitol
contrast medium in 12 congenital heart disease patients (age = 22±9 years). Informed
consent was obtained from all individuals or representatives. Data were binned
into motion-consistent sets of lines in k-space [9], called bins, to resolve respiratory and cardiac motion. Only the
end-expiratory bin was used in order to resolve respiratory motion. The cardiac bins
were then used to reconstruct 3D-CINE images. A first reconstruction
(recon-nonDF_01) without use of DF but with regularization along the cardiac dimension (
λ=0.1, optimized empirically
on one dataset) was performed by solving
argminx ½∑i=1:nFR ||F(i)C x(i) - y(i)||22 - λ/2 ||T(i)x(i) - x(i-1)||1
where index i runs over the frames, nFR is the total number of
frames, x is the image, x(i) stands for the i-th frame, C for
coil-sensitivity, F(i) for non-uniform Fourier transform, y(i)
for the raw-data vector of i-th frame and each T(i) was set equal to identity. It was assumed that x(0)=x(nFR) in a circular
fashion. Note that the name "recon-nonDF_01" referse to λ=0.1.
Motion between adjacent frames was
then estimated using non-rigid registration [10]. A second reconstruction (recon-DF_03, λ=0.3) including DF was performed by setting each T(i) equal to the linear map that deforms frame x(i) into x(i-1) by utilizing the previously estimated DF. Another reconstruction (recon_nonDF_03, λ=0.3) without DF was then performed in order to decouple the effects of regularization
weights from the inclusion/exclusion of DF. Quantitative end-points were compared between recon-nonDF_01 and
recon-DF_03 in mid-diastole (when movement is the slowest) including sharpness of RCA, LAD [11] and blood-myocardium interface sharpness [12]. A region in the blood pool with homogeneous signal was selected
and the spatial-total-variation (sTV), as well as the average signal divided by its
standard deviation, were extracted as surrogate end-points for signal-to-noise
ratio. A blinded experienced radiologist (DR) performed qualitative comparison based on the following comparison criteria: Sharpness of aortic
branch vessels interface, aortic valve leaflets, LCA, LAD, LCx and RCA, perceived
noise, and overall diagnostic confidence. EF was quantified by a
threshold-segmentation of left-ventricle on end-diastolic
and end-systolic images from recon-DF_03 and the result was compared
to the standard EF as obtained by conventional 2D-CINE acquisition. Analysis
was performed by a blinded reader with CMR analysis experience (AM). Ejection
fractions were rounded to the closest integer for consistent comparison with
those from cardiology reports.
The significance of the average-difference between any two lists of
values was assessed by a two-tailed t-test. Results
As compared to recon-nonDF_01, Recon-DF_03 led to a 6.0%±5.2% improvement in RCA sharpness (p<0.01), to a 3.8%±3.8% improvement for that of the LAD (p<0.01) and the blood-myocardium interface sharpness improvement amounted of 24.5%±23.8% (p<0.01). In a homogeneous
region of the blood pool, the ratio average/standard-deviation was improved by 8.8%±4.8% (p<0.01) for recon_DF_03 and the spatial
total variation was reduced by 12.6%±7.9% (p<0.01).
Table 1 shows the results of the blinded qualitative analysis
performed by the radiologist. It corroborates the quantitative analyses where the
majority of anatomical features where better visualized using recon_DF_03.
Figure 2 is consistent with these findings and a comparison
between recon-nonDF_01 (left column), recon-nonDF_03 (middle column) and
recon-DF_03 (right column) is provided. Figures 3 shows the same for an other
patient. In Figure 4, a reformat of the right coronary artery obtained from
recon_nonDF_01 (figure 4A), recon_nonDF_03 (figure 4B), and recon_DF_03 (figure
4C) is displayed. Figure 4D, 4E and 4F visualize the same type of reformats
obtained from a different time-point in the cardiac cycle. The EF was evaluated in 8 of the 12 patients because
4 had a single-ventricle physiology after Fontan reconstruction of a single ventricle
pathology. The measured EF in recon-DF_03 and conventional 2D-CINE were not
significantly different and their averaged difference was smaller than 1%. Figure
5A shows EF measured on recon-DF_03 versus EF measured on conventional 2D-CINE while
figure 5B shows EF measured on conventional 2D-CINE by one observer versus
another observer for comparison. Conclusion
By incorporating frame-to-frame deformation fields into the compressed
sensing reconstruction, anatomical structures become more conspicuous, which is
supported by both quantitative and qualitative findings. This enables
the use of a higher temporal regularization without additional blurring, which
advances the hypothesis that reconstruction informed by DF may also be exploited to abbreviate scanning times. We also show that the ejection fraction, one of the most
critical values for clinical decision making, can be accurately measured on
fully self-gated 3D-radial free-running images. Acknowledgements
No acknowledgement found.References
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