Peter J Lally1,2, Mark Chiew3, Paul M Matthews1,4, Karla L Miller5, and Neal K Bangerter6
1Department of Brain Sciences, Imperial College London, London, United Kingdom, 2Centre for Care Research and Technology, UK Dementia Research Institute, London, United Kingdom, 3Medical Biophysics, University of Toronto, Toronto, ON, Canada, 4UK Dementia Research Institute at Imperial, London, United Kingdom, 5Wellcome Centre for Integrative Neuroimaging, University of Oxford, Oxford, United Kingdom, 6Department of Bioengineering, Imperial College London, London, United Kingdom
Synopsis
Keywords: Data Acquisition, Pulse Sequence Design, SSFP, susceptibility
The behaviour of magnetisation under RF spoiling is typically considered to be pseudorandom from TR to TR. Here we describe a model for the coherent underlying phase behaviour which we exploit in a new acquisition strategy. We propose this as an SNR-efficient and motion-robust alternative to multi-echo spoiled gradient echo acquisitions.
Introduction
In this work, we use quadratic RF
spoiling to give a short-TR alternative to a traditional multi-echo RF- and
gradient-spoiled gradient echo (SPGR) sequence. We hypothesised that the
inherent signal averaging in the proposed approach would make it robust to artifacts
when imaging an area such as the brainstem, which usually suffers from transient
phase artifacts from pulsatile motion.Theory
Gradient spoiling and k-space aliasing
At short TRs and in the absence
of gradient spoiling, balanced steady state free precession (bSSFP) sequences
have a characteristic periodic off-resonance profile resulting in banding
artifacts. By introducing a large unbalanced gradient within the TR, the
frequency variation becomes compressed in space until the bands are no longer
visible because they are confined to a single voxel (Figure 1). In
k-space, these repeating banding patterns correspond to a series of evenly-spaced
signals (SF) that constitute the configuration states (F-states)
in the extended phase graph formalism. By careful choice of the
unbalanced gradient area, the signal components from higher order F-states can
be pushed to a specific location in k-space (k-space aliasing1, Figure 1).
Linear phase cycling
One common method for controlling
banding artifacts (e.g., in bSSFP) is to shift them across an image with a linear
phase cycling scheme. Here, the nth RF pulse has phase $$$\phi_n=n\phi_{lin}$$$. To obtain a band-free image, a series of
images can be acquired with different $$$\phi_{lin}$$$ and combined via e.g. sum-of-squares2.
In k-space this is
equivalent to rotating each F-state signal (SF) by a constant term: $$$e^{iF\phi_{lin}}$$$.
Quadratic phase cycling (RF
spoiling)
Rather than linear phase cycling,
quadratic phase cycling (RF spoiling) can be employed, with the nth RF
pulse having phase $$$\phi_n=0.5\phi_{quad}n^2$$$. This has the effect of
shifting the off-resonance profile from one TR to the next. In k-space, this is
equivalent to a phase term for SF which increments with each RF
pulse: $$$e^{inF\phi_{quad}}$$$.
An
important feature of quadratic series is that they are N-periodic, where N=2π/$$$\phi_{quad}$$$ 3,4. Provided N is an integer the off-resonance
profile is consistent after every Nth RF pulse.
Figure 2 demonstrates the magnetisation behaviour for different N-periodic
experiments, where N=120, N=12 (used in this work), N=2 (FEMR5),
and N=1 (bSSFP).
Phase dependency in RF-spoiled
sequences
At low flip angles and short-TRs,
the magnitude of each F-state signal in an RF-spoiled sequence can
be described as follows3: $$M_F(TE)=e^{-(TE+F\cdot TR)/T_2^*}sin\alpha\frac{1-e^{-TR/T_1}}{1-(cos\alpha) e^{-TR/T_1}}\tag1$$ Incorporating
local off-resonance ($$$\omega$$$),
the signal from each F-state at TE is given by: $$S_F(TE)=M_F(TE)e^{i\omega(TE+F{\cdot}TR)}\tag2$$ The measured signal in the nth TR is then the sum across all F-states after incorporating RF phase cycling: $$S(TE,n)=\sum_{F} S_F(TE)e^{iF(n\phi_{quad}+\phi_{lin})}\tag3$$ $$=e^{i\omega TE}\sum_{F}M_F(TE)e^{iF(\phi_{lin}+\omega TR)}e^{inF\phi_{quad}}\tag4$$
The phase terms in Equation 4 can
be grouped into: i) a global term, $$$e^{i{\omega}TE}$$$ ; ii) a constant linear
term, $$$e^{iF(\phi_{lin}+{\omega}TR)}$$$, causing a constant spatial
shift in the off-resonance profile; and iii) an n-dependent linear term
in F, $$$e^{inF\phi_{quad}}$$$, which causes a per-TR spatial shift
in the off-resonance profile. From
here onwards, we assume $$$\phi_{lin}$$$=0° for simplicity.
Equation 4 allows us to isolate N
separate F-state signals due to their relative phase evolution across N
measurements. Meanwhile, we can set the exact amount of gradient spoiling
needed to ensure that only N or fewer states remain within the acquired k-space.
This can all be determined a priori. A schematic of the acquisition and
reconstruction scheme is shown in Figure 3.
The signal magnitude from higher
order F-states is more heavily T2* weighted, and the phase is more
susceptibility weighted (reflected in the F$$$\cdot$$$TR terms in Equations
1-2, Figure 3). For carefully chosen TR and TE, the SF signals
therefore have relative weightings equivalent to the echo signals obtained from
a long-TR multi-echo SPGR sequence. However, there is inherent averaging across
the N-periodic states which may increase
its robustness to transient phase fluctuations.Methods
We performed an experiment on a 7T
Siemens MAGNETOM Terra (Erlangen, Germany) with a 1Tx/32Rx head coil (Nova
Medical, Wilmington, MA, USA). The proposed k-space-aliased SPGR sequence (kaSPGR1) was implemented with $$$\phi_{quad}$$$=30° to give
a 12-periodic experiment with 7 directly measured F-states (S0 to S6),
and compared to a matched multi-echo SPGR sequence with a longer TR and 7 TEs.
In a first healthy volunteer we
conducted a single-slice 2D experiment, where the flip angle was varied for
each sequence to measure SNR efficiency. In two more healthy volunteers, we
conducted 3D experiments covering a 2cm axial section across the brainstem.Results and Discussion
An SNR efficiency comparison is
shown in Figure 4 for the 2D experiment with various flip angles. All images shown
have an effective TE=28ms. kaSPGR appears to be more SNR efficient at the
optimal flip angle (10-15°) compared to the equivalent long-TR SPGR (30-35°).
Figure 5 shows reconstructed 3D
data, highlighting iron-rich brainstem structures which are more conspicuous on
kaSPGR images. We hypothesise that the proposed approach reduces the
sensitivity to transient phase fluctuation caused by cardiac pulsation, due to
averaging across N-periodic states during reconstruction.Conclusions
The inherent phase behaviour of
magnetisation under RF spoiling can be exploited to give an SNR-efficient and
motion-robust alternative to multi-echo SPGR experiments. This could enable
higher resolution T2*- or susceptibility-weighted imaging in areas
such as the brainstem, where pulsatile motion can be otherwise problematic.Acknowledgements
The authors thank Dr Iulius Dragonu (Siemens Healthineers) for providing support for sequence development, and the core team at the LoCUS 7T facility for their support with scanning. PJL acknowledges generous support from The Wellcome Trust (220473/Z/20/Z), The Edmond J Safra Foundation, UK
Dementia Research Institute, NIHR Imperial Biomedical Research Centre, and National
Institutes of Health (R01EB002524).References
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