Sampada Bhave1, Jennifer Wagner1, and Hassan Haji-valizadeh1
1Canon Medical Research USA, Mayfield Village, OH, United States
Synopsis
A modified COCOA framework was
introduced to suppress motion artifacts. The data convolution operation in
COCOA was extended to include k-space neighbors in the slice dimension along
with those in the slice. Regularization in the data convolution operation was
used as an alternative to the data combination in COCOA. The proposed technique
provided high motion artifact suppression as compared to the standard COCOA
synthesis.
Introduction
MRI
is a slow imaging modality, which makes it susceptible to patient motion. The
motion artifacts adversely affect the image quality rendering them
non-diagnostic. Many different
techniques have been proposed to correct motion artifacts in a retrospective1-4 or prospective
manner5. One such technique called data convolution and data
combination operation (COCOA)1 was
developed to correct sporadic non-rigid motion. The data convolution operation
disperses motion-related k-space errors at any given location to its neighbors
within the slice. Since different k-space locations correspond to different
motion states, the reduction of motion-related errors at each location reduces
overall motion artifact. However, the effectiveness of this technique is reduced
as motion artifacts increase. In this work, we modified the convolution
operation to include k-space neighbors in the slice dimension along with those
within the slice. We evaluated the performance of our proposed technique in
sagittal T2w C-spine MRI. Methods
The
data convolution operation in COCOA approximates the k-space signal at a
location by a linear combination of k-space signals from its neighbors within
the slice. A new k-space is synthesized from the motion-corrupted k-space using
convolution kernels. The calibration region, consisting of a few central PE
lines from the motion-corrupted k-space, is used in estimating
the kernel weight. The convolution kernel for the target pixel (shown in red) in slice x is shown in Figure 1. The kernel
used in the standard synthesis contains neighboring pixels from slice x (shown in green). We propose a modified
kernel that contains neighboring pixels from within the slice (shown in green)
and those from adjacent slices (shown in yellow). As an alternative to the data
combination step of COCOA, L2 regularization is used in the kernel weight
estimation to reduce noise amplification and maintain SNR. The COCOA synthesis
with the modified kernel is referred to as slice synthesis. Simulation Study:
To test the proposed method, a sagittal 2D FSE C-spine dataset was collected on a volunteer
using a Vantage Galan 3T MR (Canon Medical Systems Corporation, Tochigi, Japan)
and 16-ch Atlas SPEEDER Head/Neck coil under institutional IRB-approved
protocol. The volunteer was instructed to remain still during the scan. Sequence
parameters were as follows: spatial resolution=0.76mm2, slice
thickness=3mm, slice-gap=0.6mm, echo train length=17, number of shots=31, slices=13.
In the first simulation, in-plane rigid-body translation motion was simulated
for 6 of 31 shots. In the second
simulation, a through-plane translational motion was added to 6 of 31 shots.
The motion parameters for both simulations were between [-5mm, +5mm]. The
simulated data were then processed with both original COCOA synthesis and
modified COCOA slice synthesis. In-Vivo Study: 3 volunteers were scanned
for in-vivo performance evaluations using the same MR system and pulse sequence
parameters as implemented in the simulation study. Each volunteer was asked to
perform different motion maneuvers (n=6) with different event frequencies (n=3),
for a total of 54 scans. Rigid motion correction was first applied to these datasets
to enhance the image quality for a better visual comparison of COCOA synthesis.
Out of 54 total datasets, 22 datasets with perceivable motion were chosen for
analysis. An applications specialist with 13 years of experience reviewed the
images while blinded to the method applied to each image. The image quality of
reconstructions (with standard and slice synthesis) was graded on a Likert
scale 1-4 (1: Non-diagnostic, 2: Poor, 3: Diagnostic, 4: Good). Along with the
overall IQ, grading was also done for 3 other categories: artifact suppression,
image blur, and contrast. A Wilcoxon’s signed-rank test was conducted for
statistical comparisons in each category. Results
Figures
2 and 3 show the results for the simulated datasets. The reconstructions from slice
synthesis yielded superior artifact reduction (yellow arrows) for both in-plane
and through-plane motion simulations. Results for 4 of the 22 datasets are
shown in Figure 4. The cord is more homogenous and exhibits fewer residual
artifacts (yellow arrows) in the images reconstructed using the modified
approach. However, a minor increase in image blur was noticed (blue arrows)
with the modified approach. These visual findings were confirmed with the reader
analysis as seen from Figure 5(a). Slice synthesis showed a statistically
significant improvement in artifact suppression with a consistent increase in
image blur. The contrast did not change with
either approach. For 17 out of 22 datasets, images reconstructed with the slice synthesis
approach were chosen as having superior overall IQ as seen in Figure 5(b). Discussion
COCOA synthesis with adjacent
slices consistently provided better artifact suppression. This can be
attributed to a higher dispersion of k-space error due to motion in the highly
correlated k-space neighbors. Challenges related to this approach include noise
amplification and increased image blur. The increase in image blur can be
attributed to the L2 regularization used to minimize noise amplification. One
of the requirements of the approach is that the adjacent slices have high
k-space correlations. This can hinder its application in acquisitions with
slice interleaving, and a large slice gap. Further investigation on alternative
approaches to minimize image blur and maintain SNR is necessary.Conclusion
The preliminary study shows
that extending COCOA synthesis to include neighbors in the slice dimension
yields superior artifact suppression for data exposed to sporadic motion. Acknowledgements
No acknowledgement found.References
1. Huang, F., Lin, W., Börnert, P., Li,
Y. and Reykowski, A., 2010. Data convolution and combination operation (COCOA)
for motion ghost artifacts reduction. Magnetic resonance in medicine, 64(1),
pp.157-166.
2. Pipe JG. Motion correction with
PROPELLER MRI: application to head motion and free‐breathing cardiac imaging.
Magnetic Resonance in Medicine: An Official Journal of the International
Society for Magnetic Resonance in Medicine. 1999 Nov;42(5):963-9.
3. Lin, W., Huang, F., Börnert, P., Li,
Y. and Reykowski, A., 2010. Motion correction using an enhanced floating
navigator and GRAPPA operations. Magnetic Resonance in Medicine: An
Official Journal of the International Society for Magnetic Resonance in
Medicine, 63(2), pp.339-348
4. Cordero-Grande, L., Teixeira, R.P.A.,
Hughes, E.J., Hutter, J., Price, A.N. and Hajnal, J.V., 2016. Sensitivity
encoding for aligned multishot magnetic resonance reconstruction. IEEE
Transactions on Computational Imaging, 2(3), pp.266-280.
5. Lange T, Taghizadeh E, Knowles BR,
Südkamp NP, Zaitsev M, Meine H, Izadpanah K. Quantification of patellofemoral
cartilage deformation and contact area changes in response to static loading
via high‐resolution MRI with prospective motion correction. Journal of Magnetic
Resonance Imaging. 2019 Nov;50(5):1561-70.