Uten Yarach1, Suwit Saekho1, Kittichai Wantanajittikul1, Salita Angkurawaranon2, Chakri Madla2, Charuk Hanprasertpong3, and Prapatsorn Sangpin4
1Department of Radiologic Technology, Faculty of Associated Medical Science, Chiang Mai University, Chiang Mai, Thailand, 2Department of Radiology, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand, 3Department of Otolaryngology, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand, 4Philips (Thailand) Ltd., Bangkok, Thailand
Synopsis
Propeller FSE-DWI has been a method
of choice in particular for Cholesteatoma. However, its natures such as prolong scan time, low
signal-to-noise ratio (SNR), and phase variations among the blades have been
challenging. Parallel imaging technique can be applied to reduce scan time, but
phase estimation/correction is often compromised due to g-factor noise penalty.
In this work, we develop an iterative reconstruction with locally low rank
(LLR) regularization to maximize quality of propeller FSE-DWI images. As a
result, LLR enable improving SNR up to SENSE factor of 4 compared to images
obtained by vendor’s provided reconstruction engine.
INTRODUCTION
Propeller
FSE-DWI1 has been a method of choice in particular for Cholesteatoma2, since it is robust to skull base susceptibility
artifact. However, its natures such as prolong scan time, low
signal-to-noise ratio (SNR), and phase variations among the blades have been
challenging. Typically, SNR can be gained by shortening TE, which can be done
by reducing echo train length (ETL) with the expenses of prolong acquisition
time due to more blades are required. Parallel imaging technique3 can be applied to reduce scan time, but phase
estimation/correction is often compromised due to g-factor noise penalty. In
this work, we aim to implement an iterative reconstruction with locally low
rank4 (LLR) regularization without requiring phase
calibration, to maximize quality of SENSE-4 propeller FSE-DWI images.METHODS
Discrete
single-blade signal model: A single-blade signal measured during readout $$$m\in[0\,M]$$$ of phase encoding
line $$$n\in[0\,N]$$$ can be modeled as:
$$g_{c,α}[m,n]=\sum_{p=0}^{P-1}\sum_{q=0}^{Q-1}s_c [p,q]u[p,q]e^{(-j(k_{x.α}[m]p+k_{y,α}[n]q)}+ε_{c,α}[m,n]\;\;\;\;(1)$$
where $$$p\in[0\,P-1]$$$ and $$$q\in[0\,Q-1]$$$ are pixel indices. $$$u$$$ is underlying image, $$$k_{x,α}$$$ and $$$k_{y,α}$$$ are the k-space
coordinates in the readout and phase-encoding dimensions associated with blade
angle $$$α\in[0\,N_α]$$$. $$$s_c$$$ is the sensitivity
profile for coil $$$c\in[0\,C\!-1]$$$ , $$$ε$$$ and is white Gaussian
noise. Defining $$$S=[diag{S_0}⋯diag{S_{C\!-1}}]^T∈\mathbb{C}^{PQ×C}$$$, Eq.(1) abstracts to:
$$G_α=(I⨂F_α)Su_α+Ɛ_α=A_αu_α+Ɛ_α\;\;\;(2)$$
Where $$$F_α∈\mathbb{C}^{MN×PQ}$$$ is either fully or
under-sampled Fourier transform (or NUFFT-II) and $$$\bigotimes$$$ is Kronecker’s
product.
Joint blade reconstruction with locally low rank
regularization: In
LLR4,5, a set of target images ($$$u_α$$$) are obtained by minimizing the following convex cost
function.
$$\min_{\{{u_1,...,u_{N_α}}\}\in\mathbb{C}}\beta\sum_{b\inΨ}\parallel\!R_b\sum_{α=1}^{N_α}u_α\delta\,_α^T\parallel_*+\sum_{α=1}^{N_α}\parallel\!A_α u_α-G_α\parallel_2\;\;\;(3)$$
$$$\beta$$$ is a regularization
parameter. $$$\delta$$$ is Kronecker delta.
Operator $$$R$$$ extracts the $$$b_{th} (B^2×N_α)$$$ blocks from the set $$$ψ$$$ and reshapes each
block into Casorati matrix. The nuclear norm ($$$\parallel\cdot\parallel_*$$$) is the convex envelope of the rank functional. The optimization
problem in (3) can be solved using fast composite splitting algorithm (FCSA)6, a generalization of the Fast
Iterative Shrinkage Algorithm (FISTA) that allows independent management of
penalties, which herein coincides with block-wise singular value thresholding
(SVT) of the augmented Casorati matrices along with nominal blade blocks.
Data Acquisition and Processing: In-vivo experiments were performed on
1.5T MRI (Ingenia; Philips, Best, the Netherlands) equipped with 12-channel
receiver head coil. Single volunteer was scanned after informed consent
according to institutional review board-approved (IRB) protocol. A vendor
provided Multivane TSE-DWI (b-value 0, 1000 mm.2/sec.) was employed
with following parameters: FOV = 220 mm.2, readout samples 116, slice
thickness 4 mm.,12 ETLs, 12 blades (0-180° with 15°
interval), SENSE-factor of 4, scan time 3.5 minutes. In addition, coil
sensitivity maps were estimated form single-shot TSE data (scan time 12
seconds) using the ESPIRiT7. Image reconstruction
was performed in Matlab using 30 iterations of FISTA with manually optimized (, block-size 7⨯7, 2X-oversampled type-II
NUFFT8 with a width J=5
Kaiser-Bessel kernel.RESLUTS
In
Figure 1A- 1B, b0-value images obtained by vendor’s provided reconstruction appear
slightly more noise than the LLR reconstruction (by visual inspection). In Figure
2A-2C, b1000-value images obtained by vendor’s provided reconstruction are
highly corrupted by noise (Figure 2A), while LLR reconstruction enables to
clean up those noise successfully (Figure 2B). Moreover, when data are
artificially subsampled by half (Figure 2C), in which only 6 blades (0-180°
with 30°
interval) were incorporated in the LLR reconstruction, the reconstructed images
still look slightly better than the images obtained by vendor’s provided
reconstruction (12 blades).DISCUSSIONS
Typically,
vendor’s provided reconstruction engine for Propeller/Multivane TSE-DWI
comprises several steps including motion estimation and correction, per blade
phase estimation and correction, and all blades combination with intensity
compensation. Phase estimation form highly under-sampled data may fail due to
g-factor noise penalty and propagate into the final reconstructed images as
shown in Figure 1. For high SNR data (i.e., b0-value), this issue is likely to
be negligible. The LLR constraint exploits the low rank property of image
similarity in small blocks across multiple blades, thereby recovering full
image without using explicit prior knowledge of phase information. Moreover,
radial sampling type provides sufficient useful information even with small
blade numbers due to its high redundancy of data at center of k-space. This
advantage with LLR reconstruction provided good suggestion for scan time
reduction as demonstrated in Figure 2C. Finally, low rank modelling9, MUSSELS10
or ALOHA11, may be also practical for
this type of acquisition.Acknowledgements
This work was financially supported by Chiang Mai University, ThailandReferences
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