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Accelerated Propeller FSE-DWI with Locally Low Rank Regularized Reconstruction
Uten Yarach1, Suwit Saekho1, Kittichai Wantanajittikul1, Salita Angkurawaranon2, Chakri Madla2, Charuk Hanprasertpong3, and Prapatsorn Sangpin4
1Department of Radiologic Technology, Faculty of Associated Medical Science, Chiang Mai University, Chiang Mai, Thailand, 2Department of Radiology, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand, 3Department of Otolaryngology, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand, 4Philips (Thailand) Ltd., Bangkok, Thailand

Synopsis

Propeller FSE-DWI has been a method of choice in particular for Cholesteatoma. However, its natures such as prolong scan time, low signal-to-noise ratio (SNR), and phase variations among the blades have been challenging. Parallel imaging technique can be applied to reduce scan time, but phase estimation/correction is often compromised due to g-factor noise penalty. In this work, we develop an iterative reconstruction with locally low rank (LLR) regularization to maximize quality of propeller FSE-DWI images. As a result, LLR enable improving SNR up to SENSE factor of 4 compared to images obtained by vendor’s provided reconstruction engine.

INTRODUCTION

Propeller FSE-DWI1 has been a method of choice in particular for Cholesteatoma2, since it is robust to skull base susceptibility artifact. However, its natures such as prolong scan time, low signal-to-noise ratio (SNR), and phase variations among the blades have been challenging. Typically, SNR can be gained by shortening TE, which can be done by reducing echo train length (ETL) with the expenses of prolong acquisition time due to more blades are required. Parallel imaging technique3 can be applied to reduce scan time, but phase estimation/correction is often compromised due to g-factor noise penalty. In this work, we aim to implement an iterative reconstruction with locally low rank4 (LLR) regularization without requiring phase calibration, to maximize quality of SENSE-4 propeller FSE-DWI images.

METHODS

Discrete single-blade signal model: A single-blade signal measured during readout $$$m\in[0\,M]$$$ of phase encoding line $$$n\in[0\,N]$$$ can be modeled as:
$$g_{c,α}[m,n]=\sum_{p=0}^{P-1}\sum_{q=0}^{Q-1}s_c [p,q]u[p,q]e^{(-j(k_{x.α}[m]p+k_{y,α}[n]q)}+ε_{c,α}[m,n]\;\;\;\;(1)$$
where $$$p\in[0\,P-1]$$$ and $$$q\in[0\,Q-1]$$$ are pixel indices. $$$u$$$ is underlying image, $$$k_{x,α}$$$ and $$$k_{y,α}$$$ are the k-space coordinates in the readout and phase-encoding dimensions associated with blade angle $$$α\in[0\,N_α]$$$. $$$s_c$$$ is the sensitivity profile for coil $$$c\in[0\,C\!-1]$$$ , $$$ε$$$ and is white Gaussian noise. Defining $$$S=[diag{S_0}⋯diag{S_{C\!-1}}]^T∈\mathbb{C}^{PQ×C}$$$, Eq.(1) abstracts to:
$$G_α=(I⨂F_α)Su_α+Ɛ_α=A_αu_α+Ɛ_α\;\;\;(2)$$
Where $$$F_α∈\mathbb{C}^{MN×PQ}$$$ is either fully or under-sampled Fourier transform (or NUFFT-II) and $$$\bigotimes$$$ is Kronecker’s product.
Joint blade reconstruction with locally low rank regularization: In LLR4,5, a set of target images ($$$u_α$$$) are obtained by minimizing the following convex cost function.
$$\min_{\{{u_1,...,u_{N_α}}\}\in\mathbb{C}}\beta\sum_{b\inΨ}\parallel\!R_b\sum_{α=1}^{N_α}u_α\delta\,_α^T\parallel_*+\sum_{α=1}^{N_α}\parallel\!A_α u_α-G_α\parallel_2\;\;\;(3)$$
$$$\beta$$$ is a regularization parameter. $$$\delta$$$ is Kronecker delta. Operator $$$R$$$ extracts the $$$b_{th} (B^2×N_α)$$$ blocks from the set $$$ψ$$$ and reshapes each block into Casorati matrix. The nuclear norm ($$$\parallel\cdot\parallel_*$$$) is the convex envelope of the rank functional. The optimization problem in (3) can be solved using fast composite splitting algorithm (FCSA)6, a generalization of the Fast Iterative Shrinkage Algorithm (FISTA) that allows independent management of penalties, which herein coincides with block-wise singular value thresholding (SVT) of the augmented Casorati matrices along with nominal blade blocks.
Data Acquisition and Processing: In-vivo experiments were performed on 1.5T MRI (Ingenia; Philips, Best, the Netherlands) equipped with 12-channel receiver head coil. Single volunteer was scanned after informed consent according to institutional review board-approved (IRB) protocol. A vendor provided Multivane TSE-DWI (b-value 0, 1000 mm.2/sec.) was employed with following parameters: FOV = 220 mm.2, readout samples 116, slice thickness 4 mm.,12 ETLs, 12 blades (0-180° with 15° interval), SENSE-factor of 4, scan time 3.5 minutes. In addition, coil sensitivity maps were estimated form single-shot TSE data (scan time 12 seconds) using the ESPIRiT7. Image reconstruction was performed in Matlab using 30 iterations of FISTA with manually optimized (, block-size 7⨯7, 2X-oversampled type-II NUFFT8 with a width J=5 Kaiser-Bessel kernel.

RESLUTS

In Figure 1A- 1B, b0-value images obtained by vendor’s provided reconstruction appear slightly more noise than the LLR reconstruction (by visual inspection). In Figure 2A-2C, b1000-value images obtained by vendor’s provided reconstruction are highly corrupted by noise (Figure 2A), while LLR reconstruction enables to clean up those noise successfully (Figure 2B). Moreover, when data are artificially subsampled by half (Figure 2C), in which only 6 blades (0-180° with 30° interval) were incorporated in the LLR reconstruction, the reconstructed images still look slightly better than the images obtained by vendor’s provided reconstruction (12 blades).

DISCUSSIONS

Typically, vendor’s provided reconstruction engine for Propeller/Multivane TSE-DWI comprises several steps including motion estimation and correction, per blade phase estimation and correction, and all blades combination with intensity compensation. Phase estimation form highly under-sampled data may fail due to g-factor noise penalty and propagate into the final reconstructed images as shown in Figure 1. For high SNR data (i.e., b0-value), this issue is likely to be negligible. The LLR constraint exploits the low rank property of image similarity in small blocks across multiple blades, thereby recovering full image without using explicit prior knowledge of phase information. Moreover, radial sampling type provides sufficient useful information even with small blade numbers due to its high redundancy of data at center of k-space. This advantage with LLR reconstruction provided good suggestion for scan time reduction as demonstrated in Figure 2C. Finally, low rank modelling9, MUSSELS10 or ALOHA11, may be also practical for this type of acquisition.

Acknowledgements

This work was financially supported by Chiang Mai University, Thailand

References

1. Pipe JG, Farthing VG, Forbes KP. Multishot diffusion-weighted FSE using PROPELLER MRI. Magn Reson Med. 2002; 47(1): 42-52.

2. Henninger B, Kremser C. Diffusion weighted imaging for the detection and evaluation of cholesteatoma. World J Radiol. 2017; 9(5): 217-222.

3. Pruessmann KP, Weiger M, Scheidegger MB, Boesiger P. SENSE: sensitivity encoding for fast MRI. Magn Reson Med. 1999; 42(5): 952-62.

4. Trzasko JD, Manduca A and Borisch E, Local versus global low-rank promotion in dynamic MRI series reconstruction, in Proc. Int. Soc. Magn. Reson. Med, 2011, p. 4371.

5. Trzasko JD, Manduca A. Calibrationless parallel MRI using CLEAR. In Conference Record of the Forty Fifth Asilomar Conference on Signals, Systems and Computers (ASILOMAR), Pacific Grove, CA, 2011. pp. 75– 79.

6. Junzhou H, Shaoting Z, Hongsheng L, Dimitris M. Composite splitting algorithms for convex optimization, Computer Vision and Image Understanding 2011; 115(12): 1610-1622.

7. Uecker M, Lai P, Murphy MJ, Virtue P, Elad M, Pauly JM, Vasanawala SS, Lustig M. ESPIRiT—an eigenvalue approach to autocalibrating parallel MRI: where SENSE meets GRAPPA. Magn Reson Med 2014; 71: 990– 1001.

8. Fessler J.A. Model-based image reconstruction for MRI. IEEE Signal Process Mag 2010; 27:81–89.

9. Haldar JP. Low-rank modeling of local k-space neighborhoods (LORAKS) for constrained MRI. IEEE Trans Med Imaging. 2014;33(3):668-681.

10. Mani M, Jacob M, Kelley D, Magnotta V. Multi-shot sensitivity-encoded diffusion data recovery using structured low-rank matrix completion (MUSSELS). Magn Reson Med. 2017; 78(2): 494-507.

11. Lee, D., Jin, K.H., Kim, E.Y., Park, S.-H. and Ye, J.C. (2016), Acceleration of MR parameter mapping using annihilating filter-based low rank hankel matrix (ALOHA). Magn. Reson. Med., 76: 1848-1864.

Figures

Fig. 1. (A) b0-value image obtained by vendor’s provided reconstruction engine. (B) same data set as in (A) was reconstructed using offline LLR technique.

Fig.2. Same data set (SENSE-4, 12blades of b1000-value acquired using propeller FSE-DWI) was investigated with three different setups (A-C). (A) b1000-value image obtained by vendor’s provided reconstruction engine. (B) b1000-value image obtained by offline LLR technique. (C) Only 6 blades were picked up from original 12 blades data, and reconstructed using offline LLR technique.

Proc. Intl. Soc. Mag. Reson. Med. 30 (2022)
4712
DOI: https://doi.org/10.58530/2022/4712