Xiaodong Liu1, Lihua Chen1, Wen Shen1, Kun Zhang1, Xiaodong Ji1, Robert Grimm2, and Jinxia Zhu3
1Department of Radiology, Tianjin First Central Hospital, Tianjin, China, 2MR Application Predevelopment, Siemens Healthcare GmbH, Erlangen, Germany, 3MR Collaboration, Siemens Healthcare Ltd., Beijing, China
Synopsis
This
study investigated the feasibility of predicting early renal function
impairment after renal transplantation based on an intravoxel incoherent motion
imaging (IVIM)diffusion weighted imaging (DWI)radiomics model. For noninvasive
detection of kidney function impairment at an early stage, IVIM-DWI applies a
bi-exponential model to evaluate both capillary perfusion and tissue diffusion.
The overall accuracy of the radiomics model was 79.3%, with 73.3% sensitivity
and 85.7% specificity in distinguishing renal function impairment after renal
transplantation. These results demonstrate the potential of a radiomics model
for a reliable non-invasive diagnosis of renal transplant function.
Introduction
Renal
transplantation is an important treatment for patients with end-stage renal
disease. In recent years, due to the continuous development of surgical
techniques, immunosuppressants and postoperative monitoring measures, the
long-term survival rate of renal transplantation has been greatly improved; however,
the incidence of different degrees of graft function injury and even complete
loss of function is still high[1]. Therefore, the early
diagnosis and noninvasive monitoring of renal allograft function injury is an
urgent clinical problem to be solved. The clinical application of renal biopsy
in monitoring renal allograft function is limited because of its invasiveness and
low specificity of serum creatinine[2].Radiomics can obtain
various implicit information closely related to disease occurrence development
and prognosis[3]. The purpose of this
study was to develop a radiomics model based on IVIM-DWI images for early assessment
of transplanted kidney dysfunction, with the goal to provide valuable
information for early clinical diagnosis and noninvasive monitoring of renal
function impairment.Methods
A
total of 97 participants were enrolled(72 male,27 female; mean age 36.77±10.71years).
Recipients were divided into two groups with either normal or impaired function
according to the estimated glomerular filtration rate (eGFR) with a threshold
of 60 ml/min/1.73 m2. Patients were randomly assigned to either a
training cohort (n= 68) or a validation cohort (n= 29).
All
MR examinations were performed on a 3T system (MAGNETOM Trio a Tim System,
Siemens Healthcare, Erlangen, Germany). IVIM-DWI was acquired using a prototype
single-shot echo planar imaging (EPI) sequence with 11 b-values (0, 10, 20, 40,
60, 100, 150, 200, 300, 500, and 700 s/mm2). Apparent diffusion
coefficient (ADC) maps were generated inline after data acquisition. IVIM-derived
perfusion fraction (PF), pseudo-diffusion coefficient (DFast), and standard
diffusion coefficient (DSlow) parametric maps were generated using a prototype
postprocessing software (MR Body Diffusion Toolbox, Siemens).
Figure
1 illustrates the processing pipeline. Whole-kidney segmentation was performed
on eachb-value image, ADC map, and IVIM-DWI derived parametric map using ITK-SNAP
(v3.6.0, http://www.itksnap.org/). The volumes of interest (VOIs) were manually
delineated along the inner edge of the transplanted kidney parenchyma on all
slices. A total of 1604 radiomics features were then extracted from each
b-value image and parametric map using FeAtureExplorer Pro(FAE Pro, v0.3.7,
https://github.com/salan668/FAE.git).Mean normalization was applied on the
feature matrix. Pearson Correlation Coefficient (PCC) was used to exclude
redundant features. Analysis of Variance (ANOVA), relief, and Recursive Feature
Elimination (RFE) were chosen for feature selection.Support Vector Machine
(SVM),Linear Discriminative Analysis (LDA), auto-Encoder(AE), Random Forest(RF),Logistical
Regression (LR),Least Absolute Shrinkage and Selection Operator (LASSO), Adaboost(AB),
Decision Tree(DT), Gaussian Process(GP), and Naïve Bayes(NB)were applied to
construct radiomics models in all b-images and combinatorial parameters. The
discriminative performances of the radiomics models were demonstrated by
receiveroperator characteristic (ROC) curves. The area under the curve(AUC),
accuracy, sensitivity, and specificity of the optimal cutoffvalue were obtained
from ROC analysis.
The
clinicopathologic characteristics and radiologic features in the training and
validation cohorts were compared using Student’s t-test orthe Mann–Whitney
U-test for continuous variables and the chi-squared test or Fisher’s exact test
for categorical variables. SPSS software version 23.0 (IBM Corp., Armonk, NY,
USA) and Python (Python Software Foundation, version 3.5.2) were used for the
statistical analysis.Results
IVIM-DWI illustrated the best performance with an AUC of 0.686 (95% CI: 0.475–0.870), using RFE feature selection and an AE classifier yielded the highest AUC using 18 features(Figure 2). The AUCs of the training and validation datasets achieved 0.712 and 0.686, respectively. IVIM-DWI derived parametric maps showed the best performance with an AUC of 0.790 (95% CI: 0.607–0.937), using ANOVA feature selection and an AE classifier yielded the highest AUC using 3 features (Figure 3). The AUCs of the training and test datasets achieved 0.770 and 0.790, respectively (Table 2). Radiomics models based on the combination of different b-images and parametric maps were built. The b-image and IVIM-DWI derived parametric maps showed the best performance with an AUC of 0.790 (95% CI: 0.600–0.951), using ANOVA feature selection and an NB classifier yielded the highest AUC using 16 features (Figure 4). The AUCs of the training and test datasets achieved 0.816 and 0.790, respectively (Table 3).Discussion and Conclusions
We
developed a radiomics model that can be used to predict impaired allograft
function after kidney transplantation. This tool may be used to assist
clinicians in assessing transplanted kidney function by providing valuable information
for early clinical diagnosis and noninvasive monitoring of renal allograft
function injury. However, this is a retrospective study, so potential selection
bias may be introduced. Secondly, the small sample size, long inclusion period
and lack of external verification may affect the robustness of our conclusions.
Therefore, more prospective research cohort populations based on multicenter
data are needed to verify the performance of the proposed prediction model and
better summarize these results.Acknowledgements
We sincerely thank the participants in this study. References
[1] Abdeltawab H, Shehata M, Shalaby A, et al. A Novel CNN-Based
CAD System for Early Assessment of Transplanted Kidney Dysfunction. Sci Rep.
2019. 9(1): 5948.
[2] Jiang SH, Karpe KM, Talaulikar GS. Safety and predictors of
complications of renal biopsy in the outpatient setting. Clin Nephrol. 2011.
76(6): 464-9.
[3] Koyner JL, Carey KA, Edelson DP, Churpek MM. The Development
of a Machine Learning Inpatient Acute Kidney Injury Prediction Model. Crit Care
Med. 2018. 46(7): 1070-1077.