Lin Mu1, Ying Qiu2, Yun Pei3, Yi Zhu4, and Ke Jiang4
1Radiology, The First Hospital of Jilin University, Changchun, China, 2The First Hospital of Jilin University, Changchun, China, 3College of Electronic Science and Engineering, Jilin University, Changchun, China, 4Philips Healthcare, Beijing, China
Synopsis
The use
of three dimensional (3D) volumetric acquisition in clinical settings has been
limited due to long scan time. A deep learning-based reconstruction algorithm allows
shortening of scan time and provide comparable overall image quality when
compared with standard sequences. Adaptive-CS-Net, a deep neural network
previously introduced at the 2019 fast MRI challenge, was expanded and presented
here as a Compressed-SENSE Artificial
Intelligence (CS-AI) reconstruction. The purpose of the study is to determine
the feasibility of 3D PDWI accelerated with CS-AI for evaluating the knee image
quality and compared with SENSE and standard Compressed-SENSE.
Introduction
Knee pain affects
approximately 25 % of adults, limits function and mobility, and impairs quality
of life (1). MRI offers an accurate evaluation of musculoskeletal
soft tissues (meniscus, ligament, tendon, and muscle), as well as occult bone
injuries. Despite the use of parallel imaging, the available three-dimensional
(3D) sequences require more than 5 minutes per scan in clinical routine. However,
3D volumetric acquisition could provide higher spatial resolution and decrease
partial volume effects. Longer scan time makes 3D scan sequences more prone to
motion artifacts and hence may degrade image quality. Integrating artificial intelligence
(AI) into the MRI reconstruction has attracted much attention. At the 2019 fast
MRI challenge, a novel deep neural network was introduced
as Adaptive-CS-Net and showed superior performance for reconstructing MRI
images from highly under sampled k-space data (2). The Adaptive-CS-Net was expanded to multiple contrasts
and anatomical areas and is presented here as Compressed SENSE AI (CS-AI)
reconstruction (3). The purpose of this study was to acquire highly
accelerated knee MRI using the CS-AI reconstruction and compare the image
quality with the conventional method, SENSE (S), Compressed-SENSE (CS) and CS-AI
with different acceleration factors (AF).
Methods
The study was
approved by the local IRB, and written informed consent was obtained from all
subjects. A total of 23 volunteers were examined on a 3.0T whole-body clinical
system (Ingenia Elition, Philips Healthcare) using a dedicated knee coil, all
receiving a SENSE with AF 10 (S 10), CS with AF 10 and 16 (CS 10 and CS 16) and
time-equivalent CS-AI with AF 10 and 16 (CS-AI 10 and CS-AI 16) fat suppressed 3D
proton density weighted imaging (PDWI) sequence. The commercially available fat
suppressed 3D PDWI scan was acquired with parallel imaging acceleration of 4.4
(S 2 × 2.2) as reference. The sequence parameters are summarized in Table 1. The
CS-AI model used in this study is the extension of the previously introduced
AI-based reconstruction algorithm, Adaptive-CS-Net (4, 5). In CS-AI, the iterative
optimization procedure in the C-SENSE reconstruction chain is unrolled for a fixed number of
reconstruction blocks. Each block consists mainly of U-Net-like architecture,
which performs as a denoiser.
Quantitative image analysis was performed by three
radiologists with more than 5 years of experience. ROIs were placed on bone
(distal femur), muscle (gastrocnemius muscle), meniscus (the anterior horn of
the lateral meniscus), anterior cruciate ligament (ACL) and synovial fluid. Based
on the ROIs, Signal-to-noise ratio (SNR) and contrast-to-noise ratio (CNR) were
analyzed for objective evaluation. All numerical values were reported as the
mean ± SD. We used a paired t-test to compare the SNR, and CNR with the CS,
CS-AI and reference SENSE sequences. P values< 0.05 were considered significant.Results
The 3D PDWI sequence
was accelerated using two different acceleration factors. Scan time decreased
with increasing AF (reference S4.4: 394s, S/CS/CS-AI10: 185s, CS/CS-AI16: 116s).
The quantitative image analysis results for the
different knee anatomical structures are shown in Table 2. The SNR and CNR
values of S10 for most structures were significantly reduced to reference
sequences and the image quality became very noisy. The SNR of CS10 and CS16 in
some anatomical areas (muscle and ACL) were inferior to the reference sequence
(all P <0.05), and the CNR (bone-muscle, bone-ACL, meniscus-muscle, ACL-meniscus)
of CS 16 sequence were significantly reduced compared to the reference sequence.
However, the SNR of bone area for CS-AI10 and CSAI-16 were even significantly
higher than the reference sequence (P<0.05), and no difference was found for
the SNR and CNR of other anatomical locations in any of the analyzed CS-AI
sequences.
Figure 1 showed
image quality of CS,CS-AI is comparable to that of the reference method. Discussion
The CS-AI images
demonstrated high denoising performance. In both acceleration factors of 10 and
16, the CS-AI with shorter scan time showed image quality is comparable to or
better than that of the reference method. Both the reference and CS-AI showed
good image quality, but the CS-AI demonstrated a better depiction of small
structures such as cartilage in knee MRI and produced visually sharper images
compared to SENSE and Compressed SENSE. The S10 and CS16 images
became very noisy and were not suitable for effective clinical applications. The
above results suggest that the scan acceleration with the noise reduction by
CS-AI reconstruction may be useful for getting a high-quality image to improve
diagnostic confident, and it is essential to enable this new technology to be
implemented in clinical routine.Conclusion
Deep learning-based reconstruction for
cross-sectional imaging may reduce image noise, improve image quality and
potentially decrease acquisition time.Acknowledgements
None.References
1. Taylor
NJRdcoNA. Nonsurgical Management of Osteoarthritis Knee Pain in the Older
Adult: An Update. 2018;44(3):513-524.
2. Knoll F, Zbontar J, Sriram A, Muckley
M, Bruno M, Defazio A, Parente M, Geras K, Katsnelson J, Chandarana H, Zhang Z,
Drozdzalv M, Romero A, Rabbat M, Vincent P, Pinkerton J, Wang D, Yakubova N,
Owens E, Zitnick C, Recht M, Sodickson D, Lui YJRAi. fastMRI: A Publicly
Available Raw k-Space and DICOM Dataset of Knee Images for Accelerated MR Image
Reconstruction Using Machine Learning. 2020;2(1):e190007.
3. Hammernik K, Klatzer T, Kobler E, Recht
M, Sodickson D, Pock T, Knoll FJMrim. Learning a variational network for
reconstruction of accelerated MRI data. 2018;79(6):3055-3071.
4. Pezzotti N, Yousefi S, Elmahdy MS, Van
Gemert JHF, Schuelke C, Doneva M, Nielsen T, Kastryulin S, Lelieveldt BPF, Van
Osch MJP, De Weerdt E, Staring M. An Adaptive Intelligence Algorithm for
Undersampled Knee MRI Reconstruction. Ieee Access 2020;8:204825-204838.
5. Pezzotti N, de Weerdt E, Yousefi S,
Elmahdy MS, van Gemert J, Schülke C, Doneva M, Nielsen T, Kastryulin S, Lelieveldt
BPF, van Osch MJP, Staring MJae-p. Adaptive-CS-Net: FastMRI with Adaptive
Intelligence. 2019. p arXiv:1912.12259.