Simon Reichert1, Dennis Kleimaier1, and Lothar Schad1
1Computer Assisted Clinical Medicine, Heidelberg University, Mannheim, Germany
Synopsis
This study demonstrates a correlation
of protein size with sodium triple-quantum (TQ) signal. The TQ/SQ ratio of
several globular proteins increased with protein size. Furthermore, strong
sodium binding had a substantial impact on the TQ signal. The small protein α-Lactalbumin yielded a
strong TQ signal due to strong sodium binding to a calcium binding site using a
calcium-depleted protein.
Introduction
Sodium-protein interactions yield
a sodium triple-quantum (TQ) signal, a potential biomarker for cell viability. In
general, sodium ions only bind weakly to other molecules. Hence, the
correlation time
$$$\tau_c$$$ is the result of the combined
effect of environmental rotational diffusion and the diffusion of the sodium
ion itself. Larger proteins tend to rotate slower and therefore the motional
regime of sodium ions shifts to the slow motion regime ($$$\omega_0\tau_c\gtrsim1$$$). This results in bi-exponential relaxation and the creation of TQ
coherences1. For
spherical, globular proteins, the rotational correlation time scales with the
molecular weight2,3. A longer
correlation time increases the TQ signal and therefore, we propose a TQ signal
dependence on the protein size.
This study investigated a
correlation of sodium TQ signal with protein size using various globular
proteins. Most of the used globular proteins either have been shown to be a
suitable model protein for TQ signal4 or are
well-characterized proteins with knowledge about ion binding sites and affinity
for sodium ions5-7.Materials and Methods
Measurement data was acquired at
a 9.4T preclinical MRI (Bruker Biospec 94/20) equipped with either a linear Bruker
1H/23Na volume coil or a quadrature Rapid 1H/23Na
volume coil combined with a Rapid 23Na surface coil. Tab.1 lists all used
globular proteins. Each samples consisted of 2% w/v protein with 154mM NaCl at
pH=7.
A TQ time proportional phase
incrementation (TQTPPI) pulse sequence8 was
used to simultaneously quantify the single-quantum (SQ) and TQ signals (Fig.1a).
Simultaneous RF pulse phase and evolution time incrementation enabled a
separation and quantification of SQ and TQ signals at distinct frequencies as
well as the biexponential
$$$T_2$$$ relaxation times. The TQTPPI FID
(Fig.1b) was non-linearly fitted using the signal equation8:
$$Y(t)=\sin(\omega t+\phi_1)\cdot\left(A_{SQ,1}e^{-t/T_{2f}}+A_{SQ,2}e^{-t/T_{2s}}\right)+A_{TQ}\sin(3\omega t+\phi_2)\left(e^{-t/T_{2f}}-e^{-t/T_{2s}}\right)+DC $$
where
$$$Y(t)$$$ is the TQTPPI
FID amplitude, $$$A_{SQ,i}$$$ and
$$$A_{TQ}$$$
are the SQ and
TQ amplitudes, respectively.
$$$T_{2s}$$$ and
$$$T_{2f}$$$
are the
respective slow and fast transverse relaxation time. TQTPPI sequence parameters
were:
$$$T_R=5\cdot T_1$$$, 20-60 averages, $$$\Delta\tau_{evo} =100-200\mu s$$$, 600-640 phase steps. Monoexponential
$$$T_1$$$ relaxation time
was determined by a fit, using an inversion recovery pulse sequence.Results/Discussion
Fig.2 shows the TQ signal for
different protein sizes using globular proteins. With the exception of the
proteins, Ca depleted α-Lactalbumin (αLA) (14.2kDa), β-lactoglobulin
(18kDa), BSA (66.5kDa) and all hemoglobin forms (64.5kDa), the TQ signal increased
with protein size. The increased TQ signal indicated a longer correlation time correlating
with an increased rotational correlation time of larger proteins. Further increases in
protein size result in a rotational correlation time of the protein, which
exceeds the diffusional motion of sodium ions. Hence, $$$\tau_c$$$ is now dominated by the
diffusional motion and thus, further increases in protein size should have a
smaller effect on the TQ signal. This can explain the decreased TQ signal increase
for large protein sizes, like thyroglobulin (305kDa) (Fig.2).
At small protein sizes, Ca
saturated αLA (14.2kDa) and Myoglobin (17kDa) did not yield a TQ signal. This
indicated that sodium ions are in the extreme narrowing regime ($$$\omega_0\tau_c\ll 1$$$). Previous studies observed a similar effect in solutions of Ca
saturated αLA, amino acids or small molecules such as glycerol and urea despite
the use of high concentrations. In contrast, the small proteins beta-Lactoglobulin
(18kDa) and Ca depleted αLA (14.2kDa) yielded one of the largest TQ signals.
These two proteins are known for their strong sodium binding5-7, which resulted in
a slow motional regime for sodium ions due to the dominating slow rotational
motion of the protein. In the case of αLA, sodium ions bind to the calcium
binding site in the absence of calcium ions. Consequently, the strength of
sodium binding has a substantial impact on the TQ signal (Fig.3).
BSA (66.5kDa) and ferrous
hemoglobin (64.5kDa) both yielded a weaker TQ signal than the slightly smaller
protein Ovalbumin (42kDa) and the slightly larger protein Lactoferrin (87kDa). Carr
et al.6 showed
that sodium ions do not bind to both proteins at all. However, there is no
evidence that binding to both proteins is substantially weaker than to
Ovalbumin and Lactoferrin. In contrast, a paramagnetic form of hemoglobin,
methemoglobin, yielded an eight times higher TQ signal and, thus, a large TQ
signal for this protein size. The large TQ signal in the presence of a
paramagnetism, which usually substantially reduces the TQ signal, may indicate
an unknown positive effect on the TQ signal.
Excluding the proteins Ca
depleted αLA, β-Lactoglobulin, BSA and hemoglobin, due to the aforementioned
effects, the measurements indicate that the TQ signal increases with the size
of the protein. This can indicate that the in vivo TQ signal originates mainly
from larger proteins, which are generally less frequent in the cell9, and sodium
binding proteins and. However,
further investigations of intracellular proteins and cell lysates are necessary
to confirm these results.Conclusion
The TQ signal of various globular
proteins revealed a correlation of TQ signal with protein size and the
importance of a strong sodium binding. These results enhance our understanding
of the cellular origin of the TQ signal.Acknowledgements
No acknowledgement found.References
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