Brian Johnson1,2, John Penatzer1, and Sandeep Ganji1,3
1Philips Healthcare, Gainesville, FL, United States, 2University of Texas Southwestern Medical Center, Dallas, TX, United States, 3Mayo Clinic College of Medicine, Rochester, MN, United States
Synopsis
Simultaneous
parametric mapping techniques like 3D-QALAS offer means for reliable measurement
of T1, T2, and proton density while also offering the generation of standard
imaging contrasts. 3D-QALAS has also
been shown to provide consistent brain tissue segmentation and volumetric
analysis. However, high-resolution
3D-QALAS scans suffer from long scan times.
Applying acceleration techniques like compressed SENSE, which are highly
effective at reducing 3D scan times, can bring 3D-QALAS scan times under 3-minutes. Here we evaluate the acceleration of 3D-QALAS
using multiple compressed SENSE factors on scan times, image quality,
multiparametric mapping, and volumetric analysis.
Introduction
3D-QALAS (3D-quantification using an interleaved
Look-Locker acquisition sequence with a T2 preparation pulse) provides reliable
measurement of T1, T2, and proton density values of the whole brain with high
spatial resolution1. It has
also shown consistent and reproducible results for measuring cortical thickness
and subcortical structures2.
Moreover, simultaneous multiparametric mapping techniques provide objective
tissue property maps and post-processing can produce the normally acquired
T1-weighted, T2-weighted, and FLAIR image contrasts3. Despite these benefits, 3D-QALAS scan times can
be more than 10-minutes3.
These long scan acquisition times make it difficult for 3D-QALAS to be
well suited for everyday clinical use.
Given the high compatibility of compressed sensing acceleration with 3D
acquisitions3 we set out investigate the acceleration of 3D-QALAS
using compressed SENSE on scan times, image quality, multiparametric mapping,
and volumetric analysis. Methods
Five male subjects were scanned at 3T (Philips Elition X, Philips
Healthcare, Best, Netherlands) using a 32-channel head coil. 3D-QALAS scans were acquired (FOV=242 x 242 x
192 mm, 160 slices, resolution= 1.2 x 1.2 x 1.2 mm, TE= 2.4 ms, TR= 5.3 ms, min
TI= 8.9ms, TFE shots=74, TFE shot duration= 849.2 ms) with increasing
compressed SENSE factors of 2 (scan time= 5:35), 4 (scan time= 2:48), 8 (scan
time= 1:23), and 16 (scan time= 0:42). Images were post-processed using SyMRI
software (SyntheticMR, Linköping, Sweden) to produce quantitative maps (T1, T2,
and PD) including volumetric analysis (white mater, gray matter, cerebrospinal
fluid, brain parenchymal volume, and intracranial volume). T1-weighted, T2-weighted, proton density,
T2-FLAIR, dual inversion recovery (DIR),
and phase sensitive inversion recovery (PSIR) images were also generated. Results
All
acquired images and accelerations were able to be successfully post-processed
using the SyMRI software. Figure 1 shows
a sample of the synthetic image contrasts and image quality generated as a
function of increasing compressed SENSE acceleration factors. Visual inspection of the generated contrasts for
signal to noise and artifacts show adequate image quality up to an acceleration
factor of 8. A compressed SENSE factor
of 16 showed proper image contrasts but suffered from higher noise and ghosting
artifacts resulting in the worst image quality of the evaluated acceleration
factors. Similarly, the volumetric
analysis showed that the compressed SESNE acceleration of 16 consistently
showed the largest percent change for white matter and gray matter volumes
compared to the compressed SENSE acceleration factor of 2 (table 1). However, brain parenchymal volume (BPV) and
intracranial volume (ICV) remained largely unaffected by the compressed SENSE
acceleration factor. ROI analysis of the splenium of the corpus
callosum was done to assess quantitative T1, T2, and PD maps across the
increasing compressed SENSE acceleration factors (table 2). A similar trend of higher acceleration factors
leading to larger percent changes in T1, T2, and PD values was also seen with
the quantitative mapping data. However,
this variability based on compressed SENSE acceleration factors for tissue volumes
and quantitative maps still showed consistently less than a ±5 percent change
for acceleration factors of 4 and 8. Discussion
A recent study looked at applying a compressed sensing factor of 2 to
3D-QALAS brain imaging bringing the scan time down to approximately 6-minutes
with no significant differences in image quality3. While this is a dramatic improvement these
long scan times remain a hurdle for widespread clinical adoption of
3D-QALAS. Here we applied compressed
SENSE with factors beyond 2 to evaluate image quality and the effect on
post-processing image analysis. Applying
an acceleration factor of 4 produced a 2:48 scan time with no evidence of
significant differences in image quality, volumetric analysis, and quantitative
maps. Pushing the compressed SENSE
acceleration to 8 yielded synthetic image contrasts with a
higher noise profile yet were still clinically diagnostic with a 1:23 scan
time. The higher noise led to a slightly
larger percent change in the volumetric and quantitative maps. While synthetic image contrasts, volumetric
analysis, and quantitative maps were able to be generated with the compressed
SENSE factor of 16, image quality was the most degraded out of all factors
tested. Further analysis and evaluation of smaller incremental increases of
compressed SENSE and 3D-QALAS are needed to find the ideal relationship between
acceleration and reliability. Conclusion
Use
of 3D-QALAS with compressed SENSE can be used to achieve clinically viable scan
times while maintaining image quality. Drastically
lowering the acquisition time of simultaneous multiparametric mapping
techniques like 3D-QALAS to below 3-minutes could lead to more widespread
clinical adoption. Acknowledgements
No acknowledgement found.References
1.
Fujita, Shohei,
et al. "Three-dimensional high-resolution simultaneous quantitative
mapping of the whole brain with 3D-QALAS: an accuracy and repeatability
study." Magnetic resonance imaging 63 (2019): 235-243.
2.
Fujita, Shohei,
et al. "3D quantitative synthetic MRI‐derived
cortical thickness and subcortical brain volumes: Scan–rescan repeatability and
comparison with conventional T1‐weighted
images." Journal of Magnetic Resonance Imaging 50.6
(2019): 1834-1842.
3.
Fujita, Shohei,
et al. "Accelerated isotropic multiparametric imaging by high spatial
resolution 3D-QALAS with compressed sensing: a phantom, volunteer, and patient
study." Investigative radiology 56.5 (2021): 292.