Lu Wang1, Zhen Xing2, Qinqin Yang1, Congbo Cai1, Zhong Chen1, Dairong Cao2, Zhigang Wu3, and Shuhui Cai1
1Department of Electronic Science, Xiamen University, Xiamen, Fujian, China, 2Department of Radiology, First Affiliated Hospital of Fujian Medical University, Fuzhou, Fujian, China, 3MSC Clinical & Technical Solutions, Philips Healthcare, Shenzhen, China
Synopsis
Dynamic susceptibility
contrast magnetic resonance imaging (DSC-MRI) derived relative cerebral blood
volume (rCBV) is a valuable diagnosis biomarker. However, the injection of
gadolinium-based contrast agent (GBCA) in DSC-MRI acquisition is prone to cause
adverse effects. In this study, a rCBV generation method was proposed based on
deep neural network and intravoxel incoherent motion magnetic resonance imaging
(IVIM-MRI) data. Consistency analysis shows that the rCBV maps generated from
our proposed method are of high consistency with the realistic ones, implying
that the proposed method has the potential to obtain DSC-MRI derived rCBV maps
without GBCA injection.
Introduction
Dynamic susceptibility
contrast magnetic resonance imaging (DSC-MRI) involves injection of gadolinium-based
contrast agent (GBCA) to dynamically alter the T2 or T2*
transverse relaxation rate of tissues for quantitative perfusion information
acquisition. DSC-MRI derived relative cerebral blood volume (rCBV) has been demonstrated
to provide information about tumor malignancy and has been applied to brain
tumor treatment monitoring. Intravoxel incoherent motion magnetic resonance
imaging (IVIM-MRI) is a non-invasive perfusion imaging technique from which the
perfusion fraction f could be
obtained by fitting a biexponential model with multi b value diffusion weighted imaging (DWI)
data. Theoretically, CBV could be represented as the product of IVIM-MRI
derived f and tissue NMR-visible
water content fraction.1 It is well-established that deep neural
network owns incomparable nonlinear fitting ability and has been successfully
applied to solve complicated mapping relations of quantitative MRI.2,3
Here we introduced deep neural network to obtain DSC-MRI
derived rCBV maps from IVIM-MRI data without GBCA injection for the first time.Methods
MR imaging: From September 2016 to December 2018, 64 patients
with pathologically confirmed glioblastoma had undergone multimodality MR
examinations including DSC- and IVIM-MRI. Both DSC- and IVIM-MRI data were
acquired on 3T SIEMENS Skyra scanners with a 16-channel head-neck coil.
Detailed imaging acquisition protocol is as follows: (1) IVIM-MRI: Single-shot
spin-echo EPI sequence, 100 × 100 mm2 field of view, 5 mm slice
sickness, 6 mm spacing between slices, TE/TR = 68/4100 ms, echo train length = 54
ms; voxel size is 0.7 × 0.7 × 5.0 mm3, b values are 0, 50, 100, 150, 200, 300, 400, 600, 700, 800, 1000,
1400, 2000 s/mm2 and was repeated 2, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3,
4, 6 times; (2) DSC-MRI: Single-shot gradient-echo EPI sequence, 100 × 100 mm2
field of view, 5 mm slice sickness, 6 mm spacing between slices, TE/TR = 30/1600
ms, echo train length = 63 ms; voxel size is 1.7 × 1.7 × 5.0 mm3. This
retrospective study was approved by the institutional review board, and
informed consent was obtained.
Proposed scheme: Figure 1 shows the framework of proposed rCBV
generation method. Multi b value DWI images after normalization were employed as the neural
network input, together with rCBV maps obtained from 3T SIEMENS Skyra scanner
as the training labels. rCBV maps were registered to S0 (b = 0) images of each patient automatically
with MATLAB toolbox SPM12. A 5-level U-Net with perception loss was introduced
to fulfill the nonlinear mapping. Patient data were randomly divided into
training, validation and testing sets, 1000 2D slices were available for
training and 100 for validation in final.
Performance
evaluation: To quantitatively analysis
the agreement between synthetic and real rCBV maps, 3 tumor and 3 contralateral
normal-appearing white matter (NAWM) ROIs were manually drawn in the real rCBV
maps of 20 patients respectively and copied to the corresponding synthetic
ones. Mean values of 3 ROIs were averaged for tumor and WM to compute the tumor
rCBV and the tumor to white matter (T/WM) ratio. Linear regression, Pearson
correlation and Bland-Altman analysis were done for tumor rCBV and T/WM ratios
of real and synthetic rCBV maps.Results
Figure 2 shows the real and
synthetic rCBV maps of 5 patients diagnosed with pathologically confirmed
glioblastoma. The synthetic and real maps are nearly indistinguishable with
obvious elevation of tumor rCBV compared to the surrounding parenchyma.
Moreover, background noise is significantly reduced on synthetic maps.
Figure 3 illustrates the
results of analysis between real and synthetic tumor rCBV. As shown in Fig. 3A,
there is a linear relationship between them and could be represented as (rCBVT)synthetic
= 0.7999 × (rCBVT)real + 41.38 (R2 = 0.7165).
The Pearson correlation coefficient is 0.8465 (P < 0.0001). Bland-Altman analysis in Fig. 3B shows all the data
distribute within the 95% limits of agreement (LoA) with a mean difference of 410.2
(a.u.).
Figure 4 illustrates the
results of analysis between real and synthetic T/WM ratios. As Fig. 4B shows, there
is a linear relationship between them and could be represented as (rCBVT/WM)synthetic
= 0.7450 × (rCBVT/WM)real + 0.04605 (R2 =
0.7503). The Pearson correlation coefficient is 0.8662 (P < 0.0001). Bland-Altman analysis in Fig. 4C shows all the data
distribute within the 95% LoA with a mean difference of 0.92. That is, both the
tumor rCBV and T/WM ratio Bland-Altman analyses show clinically acceptable
difference between real and synthetic rCBV maps.Discussion and conclusion
This study proposes a method
for generation of DSC-MRI derived rCBV maps from
IVIM-MRI data based on deep neural network. We take the potential relationship
between IVIM-MRI derived f and
DSC-MRI derived rCBV from the perspective of physical significance into
consideration and correlate IVIM-MRI with DSC-MRI derived rCBV. Experimental
results demonstrate the feasibility of synthesizing rCBV maps from IVIM-MRI.
Especially, for IVIM-MRI, when high b
values (b = 1000-2000 s/mm2)
are available, model could be extended to the hybrid IVIM–DKI
(diffusion kurtosis imaging) model which could more accurately capture the
complexity of tumor microstructure compared to the conventional biexponential or
DKI model alone.4,5 In summary, it is feasible to simultaneously acquire
DSC-MRI derived rCBV without injection of GBCA and IVIM-MRI derived Gaussian
and non-Gaussian diffusion parameters.Acknowledgements
This work was supported by
the National Natural Science Foundation of China under grant numbers 11775184
and 82071913, and Science and Technology
Project of Fujian Province 2019Y0001.References
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