Jost M. Kollmeier1 and Jens Frahm1
1Biomed NMR, Max-Planck-Institut für biophysikalische Chemie, Göttingen, Germany
Synopsis
In undersampled radial
phase-contrast imaging, Maxwell terms can vary for individual radial
projections (spokes). Integrated into a model-based image reconstruction, a
computationally expensive spoke-by-spoke correction has been proposed, for
which the reconstruction times scale with the number of spokes per frame. To
make this approach practical for large numbers of spokes, this work proposes to
use k-means clustering of Maxwell terms in the spoke dimension and thereby
reduce the computational costs of the model-based image reconstruction for
phase-contrast MRI with radial Maxwell correction.
Introduction
Multi-directional phase-contrast flow MRI in
real time based on highly undersampled radial acquisitions1 can
provoke marked concomitant field contributions that vary for individual radial
projections (spokes) and that impair quantitative velocity maps. Recently, a
computationally expensive correction strategy has been proposed, that includes
concomitant phase errors in a non-linear model-based image reconstruction on a
spoke-by-spoke basis2. Because the approach becomes impractical for
large numbers of spokes, this work aims at reducing the numerical costs by
proposing a clustering of phase errors in the spoke dimension.Methods
Phase error maps by concomitant magnetic fields
are characterized by Maxwell coefficients, which are determined by individual
gradient design similar to3. In a pre-processing step, these
coefficients are clustered in the spoke dimension using the k-means algorithm4
to reduce the total number of individual phase error maps. Thus, similar maps of
different spokes are represented by their mean, which reduces the number of
Fourier transforms required in the forward model of the model-based
reconstruction with radial Maxwell correction2.
$$ F_{j,l}: x \mapsto \sum_s^k P_{l,s} \text{ FT} \left\{ \rho \cdot \exp\left(i \phi_{l.s} \right) \cdot \exp\left( i\sum_d E_{l.d} v_d \right) \cdot c_j \right\} $$
Here, multiple velocity maps $$$v_d$$$ are jointly
estimated along with the complex image $$$\rho$$$ and coil
profiles $$$c_j$$$. Individual
velocity encodings ($$$l$$$) are assumed to only differ in phase ($$$E_{l.d} v_d$$$) or by the individual Maxwell phase error map $$$\phi_{l.s}$$$, where $$$s$$$ is the index
along the clustered spoke dimension. The number of Fourier transforms, clustered sampling patterns ($$$P_{l,s}$$$) and clustered phase error maps ($$$\phi_{l.s}$$$) are set in advance by the parameter $$$k$$$ – the argument
of the k-means algorithm. Therefore, $$$k$$$ decides whether
all individual Maxwell phase errors are compensated for on a spoke-by-spoke
basis ($$$k = N_S$$$ the number of
spokes per frame) or a compromise is chosen between reconstruction time and accuracy
of velocity quantification ($$$k <N_S$$$).
Reconstructions of real-time three-directional
velocity maps1 in the aortic arch were performed individually for the full
range of $$$k$$$ and reconstruction
times were recorded. RMSE
values were evaluated in static image regions and served as indicator of
velocity accuracy. MRI acquisition parameters were: B0 = 3 T, Venc = 150 cm/s, TE/TR =
2.10/2.94 ms, FA = 10°, base resolution = 178, spokes per frame 5, resolution:
1.8 x 1.8 x 6 mm3, frame rate 17 fps, velocity directions 3.Results
Figure 1 compares speed maps (velocity
vector length) without Maxwell correction ($$$k=0$$$) and with Maxwell corrections using different
numbers of phase-error clusters ($$$k = 1$$$ to $$$5$$$). For increasing $$$k$$$ the
image quality visually improves as phase offset errors and image artifacts
decrease. As shown in Figure 2 this observation is accompanied by a decaying
RMSE in static regions, while the reconstruction time increases as a function
of $$$k$$$.Discussion
This work shows that clustering the Maxwell
coefficients along the spoke dimension can be considered a tool to
balance velocity accuracy and reconstruction time. The approach comes with a
control parameter $$$k$$$ that allows to
speed up the reconstruction in the case of small inter-spoke differences of
concomitant phase errors, or alternatively, to focus on the velocity accuracy
and fully compensate for individual phase errors on a spoke-by-spoke basis. The
only disadvantage is, that $$$k$$$ has to be set
in advance, i.e. prior to the image reconstruction. Given a fixed radial
phase-contrast protocol, however, the best choice of $$$k$$$ can be fixed
too. For the given example with large inter-spoke differences of Maxwell terms
and only 5 spokes per frame, $$$k=4$$$ seems to best
balance velocity accuracy and reconstruction time.
More
examples are warranted to better assess the performance of the approach. Especially
for acquisitions with larger numbers of spokes, the clustering of Maxwell terms
is expected to be of great benefit, as otherwise the
reconstruction time scales with the number of spokes. With potentially reduced
reconstruction times, the clustering-approach might even be a prerequisite for
a practical radial Maxwell correction addressing inter-spoke differences.Conclusion
For undersampled radial phase-contrast
acquisitions, a clustering of Maxwell terms in the spoke dimension can reduce
image reconstruction times of a model-based image reconstruction, while
simultaneously compensating for inter-spoke differences of concomitant phase
errors in quantitative velocity maps.Acknowledgements
References
1.
Kollmeier et al. Real‐time multi‐directional flow MRI using model‐based
reconstructions of undersampled radial FLASH–A feasibility study. NMR in
Biomedicine. 2019;32.
2. Kollmeier
et al. Spoke-wise Maxwell Correction for Real-time Phase-contrast Flow MRI with
Highly Undersampled Radial Trajectories. Proc. Intl. Soc. Mag. Reson. Med. 2020.
3. Bernstein et al. Concomitant gradient terms in phase contrast MR: analysis and
correction. Magnetic Resonance in Medicine. 1998;39.
4. Lloyd,
Stuart P. Least Squares Quantization in PCM. IEEE Transactions on
Information Theory. 1982;28.