Shengyuan Ma1 and Yuan Feng1
1School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China
Synopsis
We proposed a traveling-wave expansion based subspace search (TWESS) algorithm
for modulus estimation of MRE. Based
on a traveling wave decomposition model, we explore the orthogonal
characteristics of the signal subspace and the noise subspace. Eigenvalue
decomposition of the covariance matrix of the wave data were used to search the
wavenumber and retrieve the local modulus. Results showed the proposed method could
provide better delineation of the inclusion boundaries, even when signal-to-noise
ratio of the image was low.
Introduction
Many algorithms have been proposed to estimate the shear
modulus of soft tissues based on wave images acquired from magnetic resonance
elastography (MRE)1. Based on wave equation, Direct Inversion (DI)
is widely adopted by using the numerical Laplace operator. However, DI is not
good at distinguishing tissue boundaries, especially when the signal-to-noise
ratio of the wave image is low. Multifrequency dual elastovisco inversion (MDEV)2 could provide modulus estimates with good
anatomical features, but needs multi-frequency data. Baghani first used traveling-wave expansion (TWE)3 for
modulus estimation, but spatial resolution was compromised for indeterminacy of
the problem. Therefore, based on the TWE model, we adopted a subspace search to
improve the resolution and to reduce the fitting windows size requirements. Simulation
and real data were used for verifications.Methods
For harmonic excitation, we set the shear motion coding in the z-axis. Under
the assumption of local homogeneity and isotropy,
the general solution of the wave equation at position $$$\textbf{x}_n$$$ can be written as a combination of $$$M$$$ traveling waves with different directions but the
same wavenumber $$$k$$$.
$$u_z(\textbf{x}_n)=\sum_{m=1}^{M}s_me^{jk\textbf{d}_m\cdot \textbf{x}_n}+\epsilon_n $$
Where, $$$\textbf{d}_m$$$ denotes
unit direction vector with direction angle $$$\theta_m$$$, $$$s_m$$$ denotes
the complex amplitude in this direction, $$$\epsilon$$$ represents sampling noise that
can be treated as independently distributed
Gaussian noise. The local $$$N$$$ points share the same wavenumber $$$k$$$ and the same set of complex
amplitudes $$$s_m$$$. $$$\textbf{U}_z \in \mathbb{C}^{N\times 1}$$$ is the sample complex wave
data of the local patch, $$$\textbf{A} \in \mathbb{C}^{N\times M}$$$ is the manifold matrix, where $$$\textbf{A}=\begin{bmatrix} \textbf{a}_1(k) & \dots & \textbf{a}_M(k) \end{bmatrix}$$$ and $$$\textbf{a}_m(k)=\begin{bmatrix} e^{jk\textbf{d}_m\cdot \textbf{x}_1}& \dots & e^{jk\textbf{d}_m\cdot \textbf{x}_N}\end{bmatrix}^T$$$. $$$ \textbf{S}=\begin{bmatrix} s_1& \dots & s_M\end{bmatrix}^T $$$ denotes complex amplitudes and $$$\textbf{B}=\begin{bmatrix} \epsilon _1& \dots & \epsilon _N\end{bmatrix}^T$$$ denotes complex sample noise. The wave data of the local patch can be expressed as a matrix form:
$$\textbf{U}_z=\textbf{A}(k)\textbf{S}+\textbf{B} $$
A subspace search was used to
estimate the wavenumber $$$k$$$ 4. The
covariance matrix $$$\textbf{R}$$$ of $$$\textbf{U}_z$$$ was decomposed by eigenvalue decomposition. The
large $$$D$$$ eigenvalues correspond to the $$$D$$$ non-zero components in $$$\textbf{S}$$$,
the eigenvectors corresponding to these eigenvalues form the signal subspace $$$\textbf{U}_\textbf{S}$$$,
and the other $$$N-D$$$ construct the noise subspace $$$\textbf{U}_\sigma $$$.
$$\textbf{R}=\textbf{E}\left(\textbf{U}\textbf{U}^H\right)=\textbf{AS}\textbf{S}^H\textbf{A}^H+\textbf{B}\textbf{B}^H=\textbf{A}\textbf{R}_\textbf{s}\textbf{A}^H+\sigma^2\textbf{I}=\textbf{U}_\textbf{S}\Sigma_\textbf{S}\textbf{U}_\textbf{S}^H+\textbf{U}_\sigma\Sigma _\sigma\textbf{U}_\sigma^H$$
Where, $$$\textbf{R}_\textbf{s}=\textbf{S}\textbf{S}^H$$$ denotes the covariance matrix of $$$\textbf{S}$$$ and $$$\sigma^2\textbf{I}$$$ denotes the noise covariance matrix with the variance of $$$\sigma^2$$$. The $$$N$$$ eigenvalues are $$$\lambda_1\ge \lambda _2\ge \dots\ge \lambda _{D-1}\ge\lambda _D\ge\sigma^2=\lambda_{D+1}=\lambda_{D+2}=\dots=\lambda _{N-1}=\lambda _{N}$$$, so $$$\Sigma_{\textbf{S}}$$$ denotes $$$diag(\lambda _1,\dots,\lambda _D)$$$ and $$$\Sigma_{\sigma}$$$ denotes $$$diag(\lambda _{D+1},\dots,\lambda _N)$$$.
The column $$$\textbf{a}_m(k)$$$ of the manifold matrix corresponding to the
non-zero element in $$$S$$$ is orthogonal to the
noise subspace $$$\textbf{U}_\sigma$$$. So,
$$\textbf{a}^H_m(k)\textbf{U}_\sigma=0$$
Therefore, the wavenumber $$$k$$$ can be estimated by performing a
two-dimensional search for each patch and the corresponding shear modulus $$$G$$$ can also be obtained.
$$\min_{m,k} \textbf{a}^H_m(k)\textbf{U}_\sigma \textbf{U}^H_\sigma \textbf{a}_m(k)$$
$$G=\rho c^2=\rho(\frac{2\pi f}{k} )^2$$Results
To test the spatial resolution of the proposed algorithm, a phantom (100X190mm2)
with 8 spherical inclusions was constructed using COMSOL with a resolution of 1mm (Figure 1a). Each inclusion had a
shear modulus of 1.5 kPa with radii ranged
from 1.6 to 16 mm. The phantom background had a modulus of 1 kPa. The shear waves were transmitted from the left side (Figure 1a). We observed that the proposed
method generated modulus maps with better boundaries under both 20Hz (Figure 2b,d) and 60Hz (Figure 2c,e), especially for small
inclusions.
A public data set from the ISMRM MRE
study group5
were adopted for the evaluation of performance of the low signal-to-noise ratio
region. Inclusion #1 has a higher modulus and longer wavelength, and the
signal-to-noise ratio is much lower than that in other regions (Figure 3a). We
use one slice data under 100Hz for 2D modulus estimation, the true shear
modulus, the mean modulus estimated by TWESS, and DI at inclusion #1 are 43
kPa, 36 kPa, 7 kPa, respectively (Figure 3a, b, c). We can see that the
estimated modulus of DI for inclusion #1 is much lower than the real value,
while that of the proposed method is closer to the real value.Discussion
We proposed TWESS to estimate the local
wavenumber from wave images. Without Laplace operator, TWESS can resolve wave
reflection and noise problems better. Therefore, TWESS has potential in scenes
that require high spatial resolution, such as tumor evaluation6,
and scenes with high anti-noise performance of inversion algorithms such as
lung MRE7. Conclusions
We proposed a traveling-wave expansion based subspace search algorithm
for modulus estimation. Evaluation based on the simulation and phantom data
test demonstrated the potential of the TWESS to solve the two problems of MRE
modulus estimation: spatial resolution and robustness to noise.Acknowledgements
Funding support from grant 31870941 from
National Natural Science Foundation of China (NSFC) and grant 19441907700 from
Science and Technology Commission of Shanghai Municipality (STCSM) are
acknowledged.References
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