Jeff Sharpe1,2, Bruno Sa de la Rocque Guimaraes1,3, and Stefan Posse1,4
1Neurology Department, University of New Mexico, Albuquerque, NM, United States, 2Computer Science Department, University of New Mexico, Albuquerque, NM, United States, 3Nuclear Engineering Department, University of New Mexico, Albuquerque, NM, United States, 4Physics and Astronomy Department, University of New Mexico, Albuquerque, NM, United States
Synopsis
In the present study we
develop a real-time seed-based correlation analysis (SBC) pipeline
with online regression to compute a connectome fingerprint matrix and
characterize the performance of this methodology for quantifying
intra- and inter-network connectivity dynamics across major resting
state networks (RSNs) in healthy subjects. We assess the association
between connectivity in the limbic system and intensity of
self-induced mood states with neurofeedback based on the connectome
matrix.
Introduction
Resting state fMRI of the
limbic system is of interest for studying affective disorders and
schizophrenia. There are currently limited means of controlling data
quality and intra- and inter-subject consistency of resting-state
networks (RSNs) in cross-sectional and longitudinal studies beyond
monitoring movement (Dosenbach et al). Monitoring RSN dynamics and
false-positive connectivity in real-time would support decision
making to adapt a scanning strategy or to stabilize a subject’s
level of attention and wakefulness to maximize sensitivity and
specificity. In the clinical setting this will increase scan success;
reduce scan time and overall cost.
In
the present study we develop a real-time seed-based correlation
analysis (SBC) pipeline with online regression to compute a
connectome fingerprint matrix1
and characterize the performance of this methodology for quantifying
intra- and inter-network connectivity dynamics across major resting
state networks (RSNs) in healthy subjects. We assess the association
between connectivity in the limbic system and intensity of
self-induced mood states with neurofeedback based on the connectome
matrix.Methods
The SBC pipeline was
implemented in TurboFIRE software on an external Linux 32-core
workstation that was interfaced to the scanner via TCP/IP and
employed 10 seed regions in left and right Amygdala, left and right
Thalamus, and Brodmann areas 24[L], 13[L], 13[R], 30, 45[L], and
17/18 (Figure 1).
Partial correlations and regression of 6 rigid body movement
parameters and CSF and white matter signals were computed using
averaged sliding-windows (15s)
2,3. This
approach, which is highly tolerant to confounding signals, provides
functional intra- and inter-network connectivity patterns similar to
those obtained with conventional offline2,4.
Averaged sliding window partial correlations with regression between
the 10 seed regions were computed as a metric of inter-network
connectivity and displayed as a dynamically updated color-coded 10x10
matrix. A graphical user interface developed in C-sharp on a Windows
computer read the correlation matrices via Samba share with reduced
caching in Windows to ensure real-time data transfer, averaged the matrix elements excluding the diagonals and displayed
the result to the subject in form of a thermometer to provide
feedback of limbic connectivity. In addition to averaging matrix
elements, we have the functionality to calculate the median.
Multi-band
(8) dual-echo fMRI with weighted echo averaging was used to maximize
BOLD sensitivity in amygdala5,
while maintaining high temporal resolution (400 ms). The real-time
computational performance of the SBC analysis chain was tested in 3
healthy controls on a 3 Tesla scanner during 3 minute scans. Subjects
were asked to recall intense memories involving sadness. Subjects rated their level of
experienced emotion on a 10-point scale. Subjects were asked to
perform the mood induction and control tasks while viewing the
neurofeedback interface and to maximize inter-limbic connectivity
during mood induction trials. Psycho-physiological measures (HR, RR,
pCO2),
intra-scan mood ratings on a 10-point scale, and post-scan
self-reports were obtained.Results
An example of monitoring
intra- and inter-network temporal dynamics during neutral mood state
using the 2nd
level sliding-window approach is shown in Figure
2. Figure
2e shows a 10×10
connectome matrix that monitors the stabilization of
intra-network correlations within 12 seed regions during the scan
with corresponding metrics (Figure
2f-h). Mood
induction increased connectivity in amygdala and orbitofrontal
cortex, insular cortex, secondary somatosensory cortex (SII),
anterior and posterior cingulate cortex. The first subject suffered
mild claustrophobia in the beginning of the scanning session with
fear induction. Increased limbic connectivity in the correlations
maps and the connectivity was still seen in the first resting state
scan without mood induction, in particular in amygdala, as expected
(Figure 3).
During the subsequent mood induction scan the subject the subject
calmed down and experienced moderate sadness (5/10). Connectivity
decreased compared to the first scan but exceeded that measured in
the next subject during rest. The second subject reported neutral
mood during the first rest scan (Figure
4), 8/10 during the
first mood induction, 5/10 during the second mood induction and 10/10
during the 3rd
mood induction, which corresponded to the connectivity seen in limbic
regions in correlation maps and in the connectome matrices.Discussion
Our preliminary data suggest
that the developed pipeline enables monitoring of limbic system
connectivity in real-time and the measured connectivity appear to
correlate with subject self-report. Further subjects will be scanned
to confirm these preliminary findings. We are currently investigating
contrast-to-noise in the connectome matrix as a function of the width
of the second level window. The next step will be to introduce
weighted averaging of them based on the observed maxima in the matrix. The feedback interface worked as
intended, however, reports suggest that a
thermometer is possibly a distraction during mood induction, and we
thus developed a new interface using emojis with 3 levels of depicted sadness, which is being
tested.
This
methodology will enable innovative individualized designs of fMRI
experiments, which include (a)
interactive brain-imaging-guided interview of patients suffering from
psychiatric and neurological disorders that are refractory to
conventional diagnosis and treatment, and (b) individualized training
of mental abilities and control of brain activation patterns using experimental feedback.Conclusion
This real-time technology will
maximize the sensitivity and specificity of mapping RSN in individual
subjects; it enables online data quality control and real-time
computation of whole brain RSN connectivity fingerprints.Acknowledgements
Supported by 1P30GM122734-01
- NIHCOBREIIIPossePilotY3.
We gratefully
acknowledge Robin Campos, Kunxiu Gao, Sudhir Ramanna, Essa Yacoub,
and Lily Chau for help with methodology.References
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