Ramin Jafari1, Masoud Zarepisheh1, Richard Kinh Gian Do2, and Ricardo Otazo1
1Memorial Sloan Kettering Cancer Center, New York, NY, United States, 2Memorial Sloan Kettering Cancer Center, New york, NY, United States
Synopsis
GRASP is
an image reconstruction algorithm for free-breathing dynamic
contrast-enhanced MRI which uses universal L1-type regularization to suppress
undersampling artifacts. We propose to replace it with a subject-specific
data-driven L2-type regularization which can improve image quality and
decrease reconstruction time.
INTRODUCTION
GRASP as an iterative image reconstruction
algorithm for dynamic contrast-enhanced MRI, incorporates L1-type
regularization seeking temporal correlation and sparsity along the time domain
to supress undersampling artifacts. This type of regularization is universal,
doesn’t have a closed form solution with a high computational cost. We propose
to use a subject-specific data-driven L2-type regularization generated from
low-resolution images to replace the current GRASP regularization. This
potentially can improve image quality and address the computational cost since L2
term is differentiable and computationally more tractable than L1.METHODS
Data acquisition: Free-breathing 3D abdominal imaging was performed on seventeen
cancer patients with contrast injection on a 3T scanner (Signa Premier, GE
Healthcare, Waukesha, WI). A product T1-weighted golden-angle stack-of-stars
pulse sequence (DISCO STAR) was used with the following acquisition parameters:
repetition time/echo time (TR/TE) = 4/1.9 ms, field of view (FOV) = 320×320×140
mm3 , number of readout points in each spoke = 480, flip angle= 12 °, pixel bandwidth= 244
Hz and spatial resolution =1.6×1.6×5 mm3.
A total of 1400 spokes were acquired, with a total scan time of approximately three minutes.
GRASP reconstruction: 900 spokes with 20 temporal frames (45 spokes in
each frame) were generated by sorting the continuously acquired data [1] and
iterative GRASP reconstruction was performed to solve the following
minimization [1]:
$$d = argmin ||FCd-m||_2+α||Gd||_1$$
where F is non-uniform fast Fourier transform (NUFFT), C is the n-element coil sensitivity maps, m is the multi-coil (c coils)
radial data sorted into t temporal phases, d is the reconstructed time-resolved images, G is the temporal difference transform along the
time dimension, and α=0.03 as a regularization parameter.
EigenGRASP reconstruction: For a desired slice, k-t data for five slices
above and below were selected (to increase the training data and select similar
anatomies). NUFFT reconstruction was performed by choosing only the center of k-space
(70 read-out points) and low-resolution images with the same number of phases
as GRASP reconstruction were generated. Images were collapsed into a two-dimensional
matrix (voxel, phase) and SVD was performed. Left-singular vectors (U) were selected, truncated (r=7) and the cost function
shown in Figure 1 was minimized. w is a weighting mask with lower
values on voxels with the largest signal (i.e. aorta) along time. λ=5 was chosen as the
regularization parameter. RESULTS
Figure
2 compares NUFFT (top) and GRASP (middle) reconstruction, with the proposed
EigenGRASP (bottom) results. Both GRASP and EigenGRASP show good contrast
agreement in the liver, aorta, muscle and fat tissues. While GRASP preserves more
imaging details (middle, Portal-venous phase) compared to EigenGrasp recon, the
latter (bottom-portal-venous phase) is more successful in suppressing
artifacts.
ROI
analysis in Figure 3 comparing contrast dynamics in the aorta and liver shows
good agreement among the three (NUFFT, GRASP, EigenGRASP) reconstructions. The
contrast curves in the GRASP reconstruction are smoother compared to EigenGRASP.
However, in aorta region the peak is smaller in GRASP compared to NUFFT
reconstruction while EigenGRASP has a more similar peak suggesting a better
preservation of the contrast.CONCLUSION
The
proposed EigenGRASP with the use of temporal learning generated images with a
similar quality to the ones in GRASP. Compared to other eigen-based learning methods
[2,3] including GRASP-PRO where low-resolution GRASP images are used for
training, we only use NUFFT results (computationally efficient) and L1 term is
replaced with a new L2 term minimization. Although we used the same iterative
optimization solver and stopping criteria for both GRASP and EigenGRASP, in
theory the EigenGRASP with a closed form solution can be directly solved which
would decrease the computation cost. This study has a number of limitations
including the number of training cases and a more systematic way of selecting
SVD truncation and optimization parameters is desired.Acknowledgements
No acknowledgement found.References
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