Ryan McNaughton1,2, Ning Hua2, Lei Zhang3, David Kennedy4, Karl Kuban2, and Hernan Jara2
1Mechanical Engineering, Boston University, Boston, MA, United States, 2Boston University Medical Center, Boston, MA, United States, 3University of North Carolina at Chapel Hill, Chapel Hill, NC, United States, 4University of Massachusetts, Worcester, MA, United States
Synopsis
Purpose: To develop an integrated
theoretical model and computer algorithms for mapping individually and
simultaneously the spatial distributions of free water, alongside myelin and
iron. Theory: We solve a fast
exchange relaxation model effectively decomposing qMRI maps of nPD, R1, and R2
into maps of free water, myelin, and iron. Results:
The image processing technique generates maps of free water, myelin, and iron
in the brains of adolescents born extremely preterm. Conclusion: A theoretical framework and image processing pipeline
for mapping the distribution of free water has been developed and tested with a
cohort of adolescents born extremely preterm.
Introduction
Several
qMRI techniques have been described in the literature for mapping separately
the myelin1 and iron2 distributions in the brain. Nevertheless, this remains an active field of
research due to the important medical implications of quantifying myelin and
iron content. An unmet need to map the spatial distribution of free water exists
and could be important from both clinical and theoretical standpoints, based on
the notion that free water relaxation in the brain could serve as a testing
ground for the dipolar MR relaxation theory of Bloembergen-Purcell-Pound (BPP).
The purpose of this work was to develop an integrated theoretical
model and computer algorithms for mapping the spatial distributions of free
water together with myelin and iron, as an application of multiparameter
(MP-) qMRI of R1, R2, and the water-normalized proton density (nPD). We study
the relationships between R1, R2, and nPD as functions of the free water
density in a sub-sample of a cohort of 15-year-old adolescents born extremely
preterm.Theory
We
formulate a fast exchange relaxation (FER) model in which R1 is driven by the dipole-dipole
interactions in free water (Figure 1) and magnetization exchange
phenomena resulting from water interacting with myelin. In turn, R2 relaxation includes
these two relaxation mechanisms plus spin dephasing processes caused by the
magnetic field inhomogeneities associated to iron deposits. Accordingly, the
relaxation rates of the longitudinal and transverse magnetizations are
respectively given by:
Eq. 1: $$$R1\left(\overrightarrow{x}\right)=\alpha_f\left(\overrightarrow{x}\right)R1_f+\alpha_{Myelin}\left(\overrightarrow{x}\right)R1_{Myelin}$$$
and,
Eq. 2: $$$R2\left(\overrightarrow{x}\right)=\alpha_f\left(\overrightarrow{x}\right)R2_f+\alpha_{Myelin}\left(\overrightarrow{x}\right)R2_{Myelin}+\alpha_{Fe}\left(\overrightarrow{x}\right)R2_{Fe}$$$
In
these, $$$\overrightarrow{x}$$$ designates a voxel position, αf, αMyelin, and αFe are the
densities of free water in the intra- and extra-cellular compartments, trapped
within the myelin sheaths compartment, and exposed to the magnetic field
inhomogeneities caused by iron, respectively.
We solve
the FER system of equations above by iterating on $$$\alpha_{f}\left(\overrightarrow{x}\right)$$$ finding:
Eq. 3: $$$\alpha_{Myelin}\left(\overrightarrow{x}\right)\approx\lim_{Large R1_w}\left(SyTx_{R1}\left(\overrightarrow{x},R1_w\right)-\alpha_f(\overrightarrow{x})\frac{R1_f}{R1_w}\right)\times\frac{R1_w}{R1_{Myelin}}$$$
and,
Eq. 4: $$$\alpha_{Fe}\left(\overrightarrow{x}\right)\approx\lim_{Large R2_w}\left(SyTx_{R2}\left(\overrightarrow{x},R2_w\right)-\alpha_f(\overrightarrow{x})\frac{R2_f}{R2_w}-\alpha_{Myelin}(\overrightarrow{x})\frac{R2_{Myelin}}{R2_w}\right)\times\frac{R2_w}{R2_{Fe}}$$$
and finally for free water, by recasting Eq. 1:
Eq. 5: $$$\alpha_f\left(\overrightarrow{x}\right)=\frac{R1\left(\overrightarrow{x}\right)-\alpha_{Myelin}\left(\overrightarrow{x}\right)R1_{Myelin}}{R1_f}$$$
In the equations above, we have used the synthetic texture definitions:
Eq. 6: $$$SyTx_{R1,2}\left(\overrightarrow{x},R1,2_w\right)\equiv\left(1-\exp\left(\frac{-R1,2\left(\overrightarrow{x}\right)}{R1,2_w}\right)\right)$$$Methods
This
study was approved by the Institutional Review Board of the University of North
Carolina at Chapel Hill (UNC-CH), a participating institution of the Extremely
Low Gestational Age Newborn – Environmental Influences on Child Health Outcomes
(ELGAN-ECHO) Study. A sub-sample of 38 participants (19 females and 19 males,
mean age: 15.4 ± 0.4 years) from the ELGAN-ECHO population who underwent brain
MP-qMRI at a single site were evaluated with a 3T MRI protocol using the triple
turbo spin echo (TSE) pulse sequence. This triple weighting acquisition
consists of concatenated long repetition time dual echo turbo spin echo
(DE-TSE) and short repetition time single echo turbo spin echo (SE-TSE)
sequences implemented with identical scan geometry and receiver settings.
Typical imaging parameters: voxel = 0.5x0.5x2 mm3, TE1,2eff = 12 ms,
102 ms, TRlong = 10 s, TRshort = 0.5 s, with a 7:34 minutes scan time. Participant
images were free of braces-induced magnetic susceptibility and severe motion
artifacts. The image processing pipeline (IPP) consists of segmentation
functions and mapping algorithms programmed in Python (version 3.8.11) with the
Anaconda Navigator (version 2.0.4). nPD-R1-R2 qMRI maps were calculated
according to the Bloch equation solution as applicable for the triple TSE pulse
sequence. The MP-qMRI maps were processed to create synthetic R1 and R2 texture
maps (Eq. 6). The IPP then calculates iteratively maps of myelin,
iron, and free water content according to Eq. 3-5, respectively. Linear
regression analysis was performed to assess whether a significant association
existed between the mean MP-qMRI outcomes and free water density (P < 0.05).Results
Representative
myelin, iron, and free water maps are shown in Figure 1. Notably the free
water map shows minor white-to-gray matter contrast, confirming the free water
homeostasis premise as implied by diffusion MRI, i.e., by the very low
white-to-gray matter contrast observed in mean diffusivity maps. The relaxation
rates of the longitudinal and transverse magnetizations are negatively
correlated with the free water proton density, as shown in Figure 2.Discussion and Conclusion
A theoretical framework and IPP for mapping the
distribution of free water has been developed and tested with a cohort of
adolescents born extremely preterm. This work could have clinical applications for
assessing pathologies accompanied by alterations in free water as well as
theoretical projections for modeling the intra- and inter-molecular aspects of
dipole-dipole interactions (Figure 3) in brain tissue.Acknowledgements
This work was
supported in part by the National Institute of Neurological Disorders and
Stroke (5U01NS040069-05 and 2R01NS040069-09), National Institutes of Health
Office of the Director (5UH3OD023348-06), and the National Institute of Child
Health and Human Development (5P30HD018655-28).References
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