Tobit Führes1, Marc Saake 1, Hannes Seuss1,2, Astrid Müller1, Sebastian Bickelhaupt1, Alto Stemmer3, Thomas Benkert3, Michael Uder1, Bernhard Hensel4, and Frederik Bernd Laun1
1University Hospital Erlangen, Erlangen, Germany, 2Klinikum Forchheim, Forchheim, Germany, 3Siemens Healthcare GmbH, Erlangen, Germany, 4Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Erlangen, Germany
Synopsis
Diffusion-weighted
imaging of the liver is prone to the cardiac pulsation artifact, which can lead
to reduced lesion visibility. We addressed this problem with a two-fold
approach. First, flow-compensated diffusion weightings were used, which are
known to reduce this artifact. Using a dataset of 40 patients suffering from focal
liver lesions, we addressed the remaining signal voids with different
postprocessing techniques, namely weighted averaging, the p-mean approach, and
an outlier exclusion algorithm. The algorithms substantially increased the
lesion visibility and further reduced the pulsation artifact. An evaluation of
CNR and calculation time showed that weighted averaging was suited best.
Introduction
Diffusion-weighted
imaging of the liver is prone to the cardiac pulsation artifact, in particular
in the left liver lobe. This artifact manifests itself via signal voids in the
affected region. As a consequence, lesions in the left liver lobe might be missed,
which implies a lower diagnostical accuracy or even a wrong diagnosis.
Two
approaches that have been proposed to mitigate the severity of this artifact
are the use of flow-compensated diffusion-weightings1-3 and the use of post-processing
techniques that reduce the influence of affected image regions4-6.
The aim of
this work was to further reduce the severity of the pulsation artifact and to
therewith increase the lesion visibility. To this end, a combination of the two
approaches was used.Methods
Patient study
Forty
patients with multiple malignant focal liver lesions were scanned between
January and August 2020. All exams were performed with informed consent and IRB
approval. Images of 39 slices of the abdomen were acquired with a prototypical
flow-compensated diffusion EPI sequence in free breathing. The b-values of 50
s/mm2 (1 average) and 800 s/mm2 (4 averages) were used in
three orthogonal diffusion directions.
Postprocessing
All data processing
was performed with Python 3.8. We focused on the examination of the b800 images
because of the more dominant pulsation artifact compared to b50. Trace-weighted
images were used as reference. These were computed by first averaging the four
images per diffusion direction arithmetically and then averaging the three resulting
images geometrically. We examined three other approaches:
1. p-mean
approach according to Liau et al.4: For each diffusion direction, the
new image was calculated voxel-wise by:
$$ y=\sqrt[p]{\frac{1}{4}\sum_{n=1}^{4}x_n^p} $$
Here, we
used the factor p = 4. $$$x_n$$$ denotes the pixel
values of the four images. Afterwards, the three diffusion images were averaged
geometrically.
2. Weighted-averaging
based on Ichikawa et al.5: For each diffusion direction, the
new image was calculated voxel-wise using a weighted average. The weights of
the images were calculated from blurred versions of the images (Gaussian filter,
kernel size 11 x 11) in order to minimize the influence of single very bright
or dark voxels:
$$ w_n=\frac{x_{n,\text{blurred}}^2}{\sum_{m=1}^4 x_{m,\text{blurred}}^2} $$
Here, $$$x_{n,\text{blurred}}$$$ denotes the
voxel value of the blurred version of the n-th image. The new values were computed with the
non-blurred images:
$$ y=\sum_{n=1}^{4}w_n x_n $$
where $$$x_n$$$ is the voxel value
of the n-th un-blurred image. Afterwards, the three images were averaged
geometrically.
3. Outlier
exclusion algorithm inspired by ‘informed Restore’6: This approach makes use of the
observation that the cardiac pulsation artifact induces signal dropout rather
than signal increase.
First, a
“badness map” was calculated: The standard deviation of the 12 images was
calculated voxel-wise and divided by the reference image. This
badness map was smoothed, also using a Gaussian filter (kernel size 21 x 21).
Second, regions > 0.4 were marked as ‘bad’ regions, which means that they
are probably corrupted by the pulsation artifact. In these regions, the lowest
of the 12 signals was excluded for each voxel separately.
This process was repeated iteratively, which means that in the next step, a new
“badness map” is calculated using the remaining voxel values. In total, six
iterations were allowed. If the voxel value had been the fourth one to be
removed for a certain diffusion direction, then it was not removed in order to
allow geometrical averaging.
Afterwards,
the remaining values per diffusion direction were averaged arithmetically and
the three resulting images were averaged geometrically.
Evaluation
To assess
the lesion visibility, 18 representative lesions (nine in the left and right
liver lobe each) of nine patients as well as corresponding ambient liver
parenchyma were segmented. The CNR was calculated as
$$ CNR=\frac{S_\text{lesion}-S_\text{liver}}{\sigma_\text{liver}} $$
where $$$S_\text{lesion}$$$ and $$$S_\text{liver}$$$ denote the
lesion and liver signal, respectively, and $$$\sigma_\text{liver}$$$ denotes the
standard deviation of the liver tissue.Results
The
pulsation artifact can be substantially decreased (see Figure 1).
Representative lesions are shown in Figure 2. The changes in the CNR relative
to the reference images averaged over all segmented lesions in
the respective lobe, and the averaged calculation time are shown in
Table 1. All postprocessing techniques enhance the CNR. The increase in the
left lobe is highest for weighted averaging, in the right lobe
for the p-mean approach. The smallest change occurs for the outlier
exclusion algorithm in the right lobe, which is also the slowest algorithm.Discussion
The three
examined postprocessing algorithms are all suitable to increase lesion
visibility. According to the evaluation of the CNR and the calculation time,
weighted averaging is the best approach to increase lesion visibility. The
p-mean approach might be better in the right lobe, but as the pulsation
artifact occurs predominantly in the left liver lobe, this only plays a minor
role. The small CNR change in the right lobe in the outlier exclusion algorithm is due to its restriction on regions with high
relative standard deviation, which are predominantly in the left lobe.
The outlier
exclusion algorithm is relatively slow because of its iterative architecture.Conclusion
The
proposed weighted averaging is a well-suited and fast algorithm to increase
lesion visibility and reduce the pulsation artifact in the left liver lobe.Acknowledgements
No acknowledgement found.References
1. Rauh, S.S., et al., A mixed waveform protocol for reduction of
the cardiac motion artifact in black-blood diffusion-weighted imaging of the
liver. Magn Reson Imaging, 2020. 67:
p. 59-68.
2. Ozaki, M., et
al., Motion artifact reduction of
diffusion-weighted MRI of the liver: use of velocity-compensated diffusion
gradients combined with tetrahedral gradients. J Magn Reson Imaging, 2013. 37(1): p. 172-8.
3. Aliotta, E., H.H.
Wu, and D.B. Ennis, Convex optimized
diffusion encoding (CODE) gradient waveforms for minimum echo time and bulk
motion-compensated diffusion-weighted MRI. Magn Reson Med, 2017. 77(2): p. 717-729.
4. Liau, J., et al.,
Cardiac motion in diffusion-weighted MRI
of the liver: artifact and a method of correction. J Magn Reson Imaging,
2012. 35(2): p. 318-27.
5. Ichikawa, S., et
al., Improving the Quality of
Diffusion-weighted Imaging of the Left Hepatic Lobe Using Weighted Averaging of
Signals from Multiple Excitations. Magn Reson Med Sci, 2019. 18(3): p. 225-232.
6. Chang, L.C., L.
Walker, and C. Pierpaoli, Informed
RESTORE: A method for robust estimation of diffusion tensor from low redundancy
datasets in the presence of physiological noise artifacts. Magn Reson Med,
2012. 68(5): p. 1654-63.