Thomas Ulrich1, Malte Riedel1, and Klaas Pruessmann1
1Institute for Biomedical Engineering, ETH Zurich and University of Zurich, Zurich, Switzerland
Synopsis
It has
recently been proposed to estimate head motion from orbital k-space navigators
based on a linear signal model of the complex-valued navigator signal. In this
work, we describe the combination of this algorithm with prospective motion
correction, forming a control circuit that tracks the head so that the linear
model remains valid also for large motion ranges. This ability is demonstrated by
implementation and in-vivo imaging at 7T.
Introduction
Head
motion is a frequent problem in brain MRI that causes image artifacts and often
necessitates rescans in the clinical setting. Motion correction, prospectively
or retrospectively, is typically based on tracking the head while scanning. Among
various approaches for motion tracking1,2, k-space navigators have
the advantage that they work without any additional hardware, relying on MR
signal from the head itself.
For fast estimation
of head motion from short navigators, it has been proposed to analyze them in terms of linear
perturbation of the complex-valued navigator signal3. Based on simple least-squares fitting, this approach has
low computational cost and requires minimal reference data. However, its range
of validity is limited by the underlying linear approximation.
In this work, we address this limitation by prospective motion correction (PMC)
based on the linear estimates, forming a control circuit in which the linear
model remains valid by keeping its reference point stable in the head frame
of reference. We demonstrate this ability by implementation and in-vivo imaging
at 7T.Methods
The
proposed technique was implemented on a whole body 7T MRI system (Philips
Achieva). A single-shot orbital navigator4 with a k-space radius of 400 rad/m was
inserted into a 3D gradient-echo sequence as shown in Figures 1 and 2. During
every TR, the navigator signal is acquired and forwarded to a host computer via
TCP connection.
For
each TR, once the navigator signal arrives, the increment in head motion since
the last geometry update is calculated by linear least-squares fitting, as
described in Ref. (3), implemented in C++ for fast computation. Specifically,
the rigid-body motion parameters (3 rotations, 3 translations) are fitted to
the change in complex-valued navigator signal relative to an initial reference navigator.
The results are then fed back to the console for PMC, i.e., corresponding incremental
rotation of navigator and imaging gradients as well as modulation and
demodulation of RF pulses and received signals, respectively, according to net translation.
For in-vivo
demonstration, the 3D sequence was carried out with TE=15.79ms, TR=41.8ms, flip
angle=18°, resolution=1x1x2 mm³, FOV=190x150x100 mm³, scan duration = 5:06
minutes, using a 32-channel head receive array. With these parameters, the
latency of PMC was up to 250 ms. A healthy volunteer was instructed either to stay
still or to perform a single and steady, small or large head motion after half the
scan duration. The volunteer was asked to reproduce these motions as accurately
as possible. The scans with intentional motion were performed with and without PMC.Results
Figure 3
shows the tracking and imaging results obtained with no intentional motion and
with moderate intentional motion,
amounting to up to 2.8 mm of translation and 2.4 degrees of rotation. Without
intentional motion, the tracking results show typical slow drift along with oscillation
due to breathing. These excursions are small at the scale defined by the navigator
radius of 400 rad/m so that the linear model remained valid even without PMC. Intentional
motion resulted in palpable artefact, which was successfully removed by PMC, achieving
very similar quality as when the volunteer held still. Remaining artefact in
the lowest slice is due to through-plane dephasing as also seen without
intentional motion.
Figure 4
shows the results obtained with strong intentional motion. At large excursions
up to 5.8 degrees and 5 mm, PMC still achieved substantial correction relative
to the uncorrected case. Remaining artefact is most pronounced around the
circumference of the brain while some fine details such as the central fissure
and radial veins are still recovered. The time courses of the motion are
plausible for the requested manoeuver. Conversely, without PMC, the image
results are strongly impaired and the motion parameters are implausible, reaching
much smaller excursions and suggesting, e.g, abrupt forth-and-back y rotation
clearly inconsistent with the volunteer instructions.Discussion
These
results indicate that the proposed approach was effective at detecting and
correcting for moderate head motion of up to 3 degrees and millimeters. With strong
head motion, it still improved image quality substantially, indicating that motion
tracking per se still worked quite accurately. This is consistent with
plausible time courses of the recorded motion parameters and suggests that
feedback control of the reference point indeed rendered the linear expansion valid
across a large motion range. It doing so, the linear model estimates only the motion increment since the latest
geometry update. In contrast, without PMC and thus without control of the
reference point, the linear fit estimates net motion and the tracking failed
due to excessive violation of the linear picture.
Although PMC
permitted the detection of large motion, it did not fully recover image quality
in the strong-motion case. Artefacts remained particularly around the
circumference of the head, which could relate to secondary motion effects that
cannot be corrected by mere geometry update. Possible mechanisms include change
in coil sensitivities in the head frame of reference and motion-induced B0
perturbation.Conclusion
This study
suggests that navigators as brief as 2-3 ms, in conjunction with PMC and a
linear perturbation model, permit effective motion tracking for 3D imaging with
simple, fast run-time computation and minimal demand for reference information.Acknowledgements
No acknowledgement found.References
-
Godenschweger, F. et al. Motion correction in MRI of the brain. Phys. Med. Biol. 61, R32 (2016).
- Maclaren, J., Herbst, M., Speck, O. & Zaitsev, M. Prospective motion correction in brain imaging: A review. Magnetic Resonance in Medicine 69, 621–636 (2013).
- Ulrich, T. & Pruessmann, K. P. Detection of Head Motion using
Navigators and a Linear Perturbation Model. ISMRM & SMRT Virtual
Conference & Exhibition (2021).
- Ulrich, T., Patzig, F., Wilm, B. J. & Pruessmann, K. P. Towards
Optimal Design of Orbital K-Space Navigators for 3D Rigid-Body Motion
Estimation. ISMRM & SMRT Virtual Conference & Exhibition (2020).