Tigris S. Joseph1,2, Hanwen Liu2,3,4, Shannon H. Kolind1,2,4,5, Guojun Zhao4, Peng Sun6, Robert Carruthers4, Alice Schabas4, Ana-Luiza Sayao4, Virginia Devonshire4, Roger Tam5,7, G. R. Wayne Moore2,4,8, David K. B. Li4,5, Sheng-Kwei Song9, Anthony Traboulsee4, Irene M. Vavasour2,5, and Cornelia Laule1,2,5,8
1Physics and Astronomy, University of British Columbia, Vancouver, BC, Canada, 2International Collaboration on Repair Discoveries, University of British Columbia, Vancouver, BC, Canada, 3Montreal Neurological Institute - Hospital, McGill University, Montreal, QC, Canada, 4Medicine, University of British Columbia, Vancouver, BC, Canada, 5Radiology, University of British Columbia, Vancouver, BC, Canada, 6Imaging Physics, MD Anderson Cancer Center, Houston, TX, United States, 7School of Biomedical Engineering, University of British Columbia, Vancouver, BC, Canada, 8Pathology & Laboratory Medicine, University of British Columbia, Vancouver, BC, Canada, 9Radiology, Washington University, St. Louis, MO, United States
Synopsis
Myelin Water Imaging (MWI), Diffusion Basis Spectrum
Imaging (DBSI) and Neurite Orientation Dispersion and Density Imaging (NODDI) were
used to assessed relationships between myelin and axon-related measures in 122 multiple
sclerosis (MS) participants and 16 healthy controls. Neurite density index (NDI)
correlated strongly with radial diffusivity and weakly with myelin water
fraction, suggesting that radial diffusivity also captures diffusion in
dendrites. The lack of correlation between NDI and fiber fraction was surprising
given that both metrics are meant to relate to axon density. MWI, DBSI and
NODDI provide unique and complementary information about MS damage.
Background
Multiple sclerosis (MS) is characterized by
demyelination of nerve fibers1. MRI metrics that are specific to
myelin and axon integrity can be useful biomarkers for studying MS disease
mechanisms and remyelination treatments2,3. A number of approaches
are being used to assess myelin and axons.
Myelin Water Imaging (MWI)
quantifies different water pools based on T2 decay time. The ratio
of water associated with myelin (T2 < 40ms) to the whole spectrum
of T2 times is the Myelin Water Fraction (MWF) which correlates
with histopathological staining for myelin content4. A common
analysis method for converting the sum of T2 decay components into a
spectrum is a regularized non-negative least squares (NNLS) technique with flip
angle optimization5,6. Recently, a new machine learning approach has
been developed: spectrum analysis for multiple exponentials via experimental
condition oriented simulation (SAME-ECOS), which is more robust than NNLS in
the presence of noise7.
Diffusion-based approaches measure water diffusion
characteristics in a local area, which can be modelled to reveal specific
aspects of brain microstructure. Neurite Orientation Dispersion and Density
Imaging (NODDI) fits 3 water environments with contributing imaging
signals (intracellular, extracellular, cerebrospinal fluid) to determine the neurite
density index (NDI) which reflects neurite density (higher for greater
density of axons/dendrites)8,9. Diffusion Basis Spectrum
Imaging (DBSI) models different diffusion tensors that represent
myelinated and unmyelinated axons, restricted diffusion, nonrestricted
diffusion, and cerebrospinal fluid9. DBSI metrics include radial
diffusivity (RD, thought to increase with myelin damage10,11), axial
diffusivity (AD, thought to decrease with acute, and increase with chronic,
axon damage11,12), and fiber fraction (FF, axon density10).
Previous work observed limited correlations between NDI
and mcDESPOT-derived MWF in some brain regions of healthy controls (HC)13.
Investigating relationships between MRI metrics supposedly quantifying similar aspects
of microstructural damage may be useful in determining to what extent these
metrics correlate with each other and where they diverge to provide
complementary information.Objective
To assess pair-wise correlations between metrics that
reflect myelin and axon damage: (1) NNLS MWF, (2) SAME-ECOS MWF, (3) NDI, (4)
DBSI RD, (5) DBSI AD, and (6) DBSI FF in normal and normal-appearing white
matter and MS lesions.Methods
Data Collection:
Sixteen healthy controls (HC) and 122 MS (demographics in Figure 1) underwent
3T MRI (Philips Achieva) to collect MWI (48-echo Gradient and Spin Echo, TR/TE=1073/8ms,
resolution = 1x1x2.5mm3)14, diffusion (99
directions, b values = 0–1500, TR/TE=4798/79ms, voxel size = 2×2×2mm3)15,
3DT1
(TR/TE/TI=3000/3.5/926ms, resolution = 1x1x1mm3), and
proton-density/T2-weighted (TR/TE1/TE2=2900/8.42/80ms, resolution =
1x1x3mm3). MS participants were recruited from 2 studies using the
same MRI protocol.
Analysis: Voxel-wise MWF maps (T2 < 40ms) were made using NNLS5,6
and a trained SAME-ECOS neural network7. Diffusion
data was eddy current corrected and smoothed using FSL toolbox16. NDI
maps were made using NODDI algorithm with AMICO to accelerate17.
DBSI RD, AD, and FF maps were made with in-house MATLAB software15.
All quantitative maps were registered to 3DT1. CSF masks were made
using thresholded diffusion b0 images. Lesion masks were segmented by an
experienced radiologist using seed points on the PD/T218,
then registered to 3DT1. HC normal white matter (WM) and MS normal
appearing WM (NAWM) masks were made using FAST segmentation19 on the
3DT1, with lesion and CSF masks subtracted. Masks were overlaid on
registered NNLS MWF, SAME-ECOS MWF, NDI, DBSI RD, DBSI AD, DBSI FF maps to
obtain mean WM, NAWM and lesion values. Pairwise Pearson correlation
coefficients were used to assessed relationships between MRI metrics (significance
p<0.05).Results and Discussion
Representative maps are displayed in Figure 2. Correlation
plots of pair-wise myelin and axon metrics comparisons are displayed in Figures
3 and 4. Correlation coefficients are summarized in Figure 5. NNLS
and SAME-ECOS MWF correlated strongly with each other, in agreement with a
previous study7, and correlated similarly with most other metrics.
MWF correlated negatively with RD, suggesting that less
myelin is related to increased diffusivity in the radial direction. NDI
correlated strongly with RD and weakly/moderately with MWF; this disassociation
is likely because RD is determined by inter-fiber diffusion freedom and would
thus also reflect dendrite density (inter-dendritic space).
NDI was only weakly correlated with FF in lesions and
not at all in white matter, which is surprising given that both metrics are
meant to relate to axon density. NDI was however correlated with AD in lesions where
the reduced neurite density is associated with increased extra-axonal space, resulting
in increased diffusion. AD negatively correlated with FF in white matter,
illustrating that an increase in AD could be related to a loss of axons. AD was
not correlated with FF in lesions, which may be due to debris impacting axial
diffusion.
Correlations between FF and RD, NDI and RD, and NDI
and MWF may reflect some coupling between myelin and axonal pathology. Conclusion
Weak correlations between MWF and DBSI radial
diffusivity suggest they are quantifying similar microstructure characteristics
to some extent, but are uniquely influenced by other factors. NODDI NDI
correlated more strongly with myelin metrics than axonal metrics, suggesting it
may be more sensitive to myelin changes. Further histological validation
studies that compare these methods should be done to determine which metrics accurately
characterize tissue microstructure and pathology.Acknowledgements
The collection of the data was funded by the MS
Society of Canada and F. Hoffman La Roche. TSJ was funded by an UBC MS Connect
Summer Studentship Award funded from the Christopher Foundation and an endMS
Master’s Studentship award from the Multiple Sclerosis Society of Canada. Thank
you to the MRI technologists at the UBC MRI Research Center, the neurologists
and staff at the UBC MS Clinic, as well as the study participants and their
families. This work was conducted on the traditional, ancestral, and unceded
territories of Coast Salish Peoples, including the territories of the xwməθkwəy̓əm
(Musqueam), Skwxwú7mesh (Squamish), Stó:lō and Səl̓ílwətaʔ/Selilwitulh (Tsleil-
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