Woowon Lee1, Emily Y Miller2, Hongtian Zhu1, and Corey P Neu1,2
1Paul M. Rady Department of Mechanical Engineering, University of Colorado, Boulder, CO, United States, 2Biomedical Engineering Program, University of Colorado, Boulder, CO, United States
Synopsis
Displacement encoding with stimulated echoes (DENSE) MRI is used to calculate pixel-level deformation maps of soft tissues under
repetitive motion. It is a powerful technique that can quantify the mechanical
behavior of tissues from displacement. We apply spiral DENSE MRI on human knees
and obtain multi-frame displacement and strain maps during varus loading,
leading to compressive motion on the medial condyle. Since high SNR DENSE
images require long scanning time which is costly and less tolerable for
participants, we additionally apply compressed sensing (CS) to reduce the
imaging time to less than five minutes.
INTRODUCTION:
DENSE
MRI used with displacement under applied loading by MRI (dualMRI) 1 is
capable of capturing deformation (e.g. displacements and strain) at high
spatial resolution. Mechanical properties of soft tissue are further obtainable
2 which may correlate with diseases including osteoarthritis (OA). However,
studies are limited to a single frame analysis which do not reveal how
cartilage deforms during motion. In addition, high-contrast DENSE MR images
require long scanning times that is burdensome for participants and leads to misregistration
errors. In this study, we apply spiral DENSE MRI 3 on in vivo
human knees under varus loading and capture multi-frame displacement and strain
maps. We also use CS and demonstrate that the imaging time can be significantly
reduced.METHODS:
Varus Loading of Human Knees: Four adult subjects (2 males/2 females, age range=26-35)
with healthy knees were recruited. Varus loading of the knee was applied to
compress the medial tibiofemoral joint to half body weight using a pneumatic
actuator applied at the ankle. The load magnitude at the knee was estimated
using a moment balance, the known force applied at the ankle, and moment arms
extending from the knee joint (centerline) to the load application point at the
ankle, and additionally from the knee joint center to the condyle. During imaging, cyclic loading (0.5Hz) was
applied to mimic a walking cadence.
Multi-frame Spiral DENSE MRI: The right knee of each participant
was imaged by a clinical MRI system (3T; Siemens
Prismafit). We applied load
preconditioning (8 minutes) to reduce the viscoelastic response of cartilage 4
before spiral DENSE MRI. Multi-frame (27) coronal plane images were collected
with the following parameters: temporal resolution=40ms, interleaves=10; TE/TR=2.5/20ms,
spatial resolution=360×360µm2, slice thickness=1.7mm, and
displacement encoding gradient=0.32cycles/mm. We used 1 and 8 image averages to
control the SNR and imaging time. Imaging time increased with averages, with 1
and 8 averages requiring approximately 1.7 and 13.6 minutes, respectively. Raw k-space
data was saved for analysis by CS.
Displacement and Strain Calculation:
Tibiofemoral contact areas were manually segmented
using custom software (MATLAB) and used as binary masks. Displacements within the
regions of interests (ROIs) were determined from phase data 1 and subsequently
smoothed by a locally weighted scatterplot smoothing filter (100 cycles/span=10).
Finally, the smoothed displacement was used to calculate in-plane
Green-Lagrange strains (E; Fig. 1).
Compressed Sensing (CS): We applied CS analysis using the Berkeley Advanced
Reconstruction Toolbox (BART) 5 parallel imaging and compressed
sensing command to reconstruct the images. Briefly, the inputs were the spiral
trajectory, channel sensitivity map and k-space
data along the interleaves. The r value was 0.01 and all processes underwent
five iterations. CS was applied on the low SNR k-space data, frame 27.
Statistical analysis: The SNR was measured by first selecting the medial condyle
and background region in the DENSE MR magnitude image. Subsequently, the mean
intensity for both regions was calculated to obtain the ratio. To compare the
discrepancy of the raw displacements with respect to the average 8 data, we
used root mean square error (RMSE) on selected ROIs.RESULTS:
The
knee joint translated both in x and y (Fig. 2A) due to varus loading
applied at the ankle. Displacements in x were spatially uniform in the
medial cartilage while y displacements showed higher values near the tibia
compared to the femur. The maximum strain values for subjects approached 0.16 (Exx and Exy)
to 0.21 (Eyy),
and deformation patterns were consistent across individuals (Fig. 2A, B). Low
average images showed substantially lower signal compared to high average
images, resulting displacement maps with more noise (Fig. 3A). CS improves the
SNR and RMSE while generating a smooth displacement map (Fig. 3B). The average
1 image does not show the compressive strain in Eyy as is shown in the average 8 image, while CS
moderately improves this discrepancy (Fig. 3C). To further explore the ability
of CS, we ran the analysis on image average 1 through 8 (Fig. 4). The SNR was
consistently higher in the CS images while the RMSE becomes equal to the DICOM
images above 5-6 averages. RMSE of CS at average 1 was comparable with DICOM average
3, while average 2 (3.4 minutes) was similar with DICOM average 6.DISCUSSION:
In
this study, we confirmed our varus loading device applied a compressive load on
the medial condyle and spiral DENSE MRI documented dynamic changes through time-course
frames in displacements and strain. Also, we showed CS on low averaged k-space
data can substantially improve the contrast and reduces the displacement RMSE. Adding
more k-space data on the CS input does not improve the RMSE as much as observed
in DICOM images as the RMSE significantly decreases with more averages,
suggesting that further analysis is needed. Nonetheless, the results of this
study indicate spiral DENSE MRI combined with CS can generate high temporal
resolution displacement maps in knee cartilage with less than five minutes of
imaging time.Acknowledgements
The authors would like to acknowledge funding from NIH R01 AR063712-08.References
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