Jian Shen1 and John Wood1,2
1University of Southern California, Los Angeles, CA, United States, 2Children's Hospital Los Angeles, Los Angeles, CA, United States
Synopsis
Asymmetric spin echo (ASE) sequence is a technique
for mapping oxygen extraction fraction (OEF) and venous cerebral blood volume
(vCBV). However, there might be an overestimation of vCBV due to the diffusion effect related to vessel size. In this study, we use Monte Carlo simulation to study this effect and investigate the feasibility of estimating vessel size index from ASE data.
Introduction
Asymmetric spin echo (ASE) sequence is a technique for mapping oxygen
extraction fraction (OEF) and venous cerebral blood volume (vCBV).1 The
analytical model assumes that the signal decay behaves in the static dephasing
regime (SDR), which means the diffusion of water does not affect the signal
decay.2 However, recent research reveals that this assumption might not be valid
and the diffusion effect might introduce a vessel size dependent effect on the
signal decay.3,4 We hypothesize that the effect introduces bias to the expected
parameters and the actual signal decay might reflect the information of vessel
size. Thus, in this study we use Monte Carlo simulation to study this effect
and investigate the feasibility of using ASE data to estimate vessel size index.Methods
Theory: ASE can be
viewed as a modification of SE in which the acquisition time is fixed with a
shifting 180 pulse, increasing dephasing and creating signal decay with R2’
contrast. The signal decay can be simplified to two relaxation regimes
separated by 2$$$\tau=1.5/\delta \omega$$$ with constant TE and a sufficiently long TR5:
$$S_L(\tau) = c*exp(-\lambda*\delta \omega*2\tau+\lambda)(1)$$
$$S_S(\tau) = c*exp(-0.3*\lambda*(\delta \omega*2\tau)^2)(2)$$
Where c is a
constant, $$$\lambda$$$ is
the venous blood volume fraction, $$$\tau$$$ is
the time shift from the expected echo formation, and $$$\delta \omega$$$ is
the frequency shift induced by the microscopic susceptibility. In the presence
of randomly oriented cylinders containing de-oxygenated hemoglobin, $$$\delta \omega$$$ can
be written as follows:
$$\delta \omega = 4/3*\pi*\gamma*\Delta \chi*Hct*B_0*OEF(3)$$
$$R_2' =\delta \omega*\lambda(4)$$
Where $$$\gamma$$$ is
the gyro-magnetic ratio, B0 is the main magnetic field strength, Hct
is the fractional hematocrit and $$$\Delta \chi$$$ is
the susceptibility difference between fully oxygenated and fully deoxygenated
blood. R2’ and $$$\lambda$$$ can
be estimated calculating the slope and intercept of plot of log (SL(t))
versus 2t
(Eq 1).
ASE
acquisition and processing: A total of 10 subjects (female 30%, age 24±8),
including 6 sickle cell disease patients and 4 healthy controls were studied.
All subjects underwent an MR study using Philips 3T Achieva System. The ASE sequence was acquired with the following parameters: TR = 3s,
TE = 62ms, resolution = 3*3*6 mm3, matrix size = 64*64, range = 10:0.5:20 ms. Each scan was
composed of 28 dynamics, including 7 spin echo scans ($$$\tau$$$ =
0) and other 21 equally spaced $$$\tau$$$ value from 10ms to 20ms. For every voxel in
ASE dataset, the first 7 spin echo values were averaged, and the other 21
values with different $$$\tau$$$ values were fitted linearly in log space to
generate R2’ and $$$\lambda$$$. Voxel-wise OEF maps were subsequently
derived using equation 3.
Simulation: 1. A spherical
simulation space was generated containing vessels represented by infinite and
random-oriented cylinders with fixed radius. 2. The susceptibility-induced
field shift ($$$\Delta$$$B_0) was calculated in
K-space using the known Fourier transform of infinite cylinders.6 3. Monte
Carlo random walk was performed simulating the diffusion of water protons. Each
step taken by a proton followed the normal distribution with 0 mean and
standard deviation ($$$\sigma = \sqrt{2D\Delta t}$$$ for
each dimension, D is the
diffusion coefficient and ∆t is the time step)7. 4. The phase accumulation in the
rotating frame at each step was calculated by summing over the field
contributions from all vessels based on: $$$\Delta \varphi = \gamma \Delta B_0\Delta t$$$.
5. The signal decay curve was plotted by summing up all the protons with
calculated phase. Simulations were performed for a selection of vessel radii
(5, 10, 25, 50 um) and diffusion coefficients (D=0, 10e-10, 10e-9
m2/s). The remaining parameters were: number of protons N=10000, simulation
sphere radius=200 um, vessel volume fraction=3%, TE=60 ms, τ=0-30 ms by 1 ms
increments.
VSI
estimation:
Using the simulation data, we calculated a signal decay curve dictionary under
different combinations of vessel sizes and diffusion coefficients. From this dictionary, we processed signal
decay curves from the in-vivo ASE data for each voxel and selected the vessel
size yielding the minimum squared error for each diffusion coefficient. Results
Representative
signal decay curve and the Monte Carlo simulation system are shown in Figure 1.
The decay curves under different vessel sizes and diffusion coefficients, as
well as the decay curve by theory (Equation 1 and 2) are displayed in Figure 2.
We can see that the fitting error increases when the vessel size decreases or
the diffusion gets larger. And the signal behaves as expected by theory when
the radius is 50 um, despite the diffusion condition. Typical VSI map is shown
in Figure 3. And the mean VSI for SCD is 3.09 and the mean VSI for healthy is 3.01.Discussion
In
this study, the Monte Carlo simulation is used to study the signal generation
of ASE and the potential effect of vessel size and diffusion. It turns out the
assumption of ASE might be invalid for small vessels and there might be a shift
from the static dephasing regime to diffusion narrowing regime.3 This method
also demonstrates the feasibility of generating VSI map from ASE data though
the result is preliminary. Further optimization of the simulation process, extension
of the curve dictionary and cross validation over a large dataset are required.Acknowledgements
This work is supported by the National Heart
Lung and Blood Institute (1RO1HL136484-A1, 1U01HL117718-01), the National
Institutes of Health (1R01-NS074980), the National Institute of Clinical
Research Resources (UL1 TR001855-02) and by research support in kind from
Philips Healthcare.References
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