Dan Zhu1 and Qin Qin2,3
1Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, United States, 2The Division of MR Research, Department of Radiology, Johns Hopkins University, Baltimore, MD, United States, 3F.M. Kirby Research Center for Functional Brain Imaging, Kennedy Krieger Institute, Baltimore, MD, United States
Synopsis
Fast
image acquisition is commonly used in quantitative MRI after contrast preparation,
such as turbo-filed-echo (TFE), balance steady-state-free-precession (bSSFP), and
turbo-spin-echo (TSE). k-Space data acquired are filtered by a modulation transfer
function (MTF), causing contrast loss and blurring. Here, we derived the
analytical formulation of the corresponding point spread function (PSF) of
Cartesian TFE, bSSFP and TSE with 180° refocusing. The contrast-to-noise ratio
(CNR) is defined and maximized, providing an analytically optimized selection
of TFE/TSE factors and flip angles. bSSFP serves high CNR, small FWHM and large
TFE factors. Long TR and short TE are suggested for TFE studies.
Introduction
Many
advanced pulse sequences combine contrast-preparation modules, like T1, T2, diffusion
or perfusion weighting, with an efficient acquisition scheme for high
resolution, large spatial coverage, or both. This requires a low-high profile order to
ensure the k-space center be acquired at the beginning of the readout to
preserve the prepared contrast. A long readout to fill the rest of the k-space
would be desired for speedy acquisition. Typical fast imaging methods include turbo-filed-echo
(TFE), 1 balance
steady-state-free-precession (bSSFP) 2 and
turbo-spin-echo (TSE). 3 k-Space
data are filtered by a modulation transfer function (MTF) due to magnetization relaxation
during the acquisition, which may cause signal/contrast loss and blurring, 4,5 and is studied
limitedly using the image-space point spread functions (PSF). 5,6 For TSE
with 180° refocusing, T2 relaxation is the main effect for PSF; 5 For TFE and bSSFP, analytical characterization
of relaxation-induced PSF has not been studied, as multiple factors (T1/T2,
flip angle and TR) interact together. Here, we derived the analytical formulations
of the MTF and PSF for Cartesian TFE, bSSFP for the first time, which are compared
to TSE. The contrast-to-noise ratio (CNR) is defined and maximized with optimal
TFE/TSE factor (N), flip angles (FA, α). Theory
TFE
The transient-state transverse signal
after the $$$n^{th}$$$ excitation pulse is: $$M_{xy}(n)=A\varepsilon^{n-1}+B,$$$$A=M_z(0)E_2\sin\alpha-B,\quad B=\frac{M^0(1-E_1)}{1-\varepsilon}E_2\sin\alpha.$$ Here, $$$\varepsilon=e^{-TR/T1}\cos\alpha$$$, $$$M_z(0)$$$ is the initial longitudinal
signal, $$$E_1=e^{-TR/T1}$$$, $$$ E_2=e^{-TE/T2^*}$$$ and $$$M^0$$$ is the equilibrium signal.
MTF
at k-space
location $$$k\in[-0.5, 0.5]$$$ with a low-high profile
order in a single phase encoding direction is: $$MTF(k)=M_{xy}(2|k|N)=A\varepsilon^{2|k|N}+B.$$The corresponding PSF in the image
domain is: $$PSF(x)=A\frac{\varepsilon^N(N\ln\varepsilon\cos(\pi x)+\pi x\sin(\pi x))-N\ln\varepsilon}{N^2\ln^2\varepsilon+\pi^2x^2}+B\ \text{sinc}(\pi x).$$The peak amplitude is a linear
function of $$$M_z(0)$$$: $$PSF(0)=\frac{A(\varepsilon^N-1)}{N\ln\varepsilon}+B=\text{Slope}\ M_z(0)+\text{Intercept},$$ $$\text{Slope}=\frac{\varepsilon^N-1}{N\ln\varepsilon}E_2\sin\alpha,\quad\text{Intercept}=(1-\frac{\varepsilon^N-1}{N\ln\varepsilon})B.$$Based on this linearity, we define the
CNR as the slope multiplied by an offset of SNR gain from an extended
acquisition window ($$$ACQ=NTR$$$), which is proportional to $$$\sqrt{ACQ}$$$: $$CNR_{TFE}=\text{Slope}\sqrt{NTR}=\frac{\varepsilon^N-1}{\ln\varepsilon}\sqrt{\frac{TR}N}E_2\sin\alpha.$$Theoretically, $$$CNR_{TFE}$$$ is monotonically increasing
with TR. For a fixed TR, there is an optimal solution: $$N^*=\frac{1.26}{\tau-0.5\ln{q(\tau)}},\quad \alpha^*=\arccos\sqrt{q(\tau)},\quad CNR_{TFE}^*=0.64\sqrt\frac{TR(1-q(\tau))}{\tau-0.5\ln{q(\tau)}}E_2.$$Here $$$\tau=\frac{TR}{T1}$$$, and $$$q(\tau)\in(0, 1)$$$ is a solution of the transcendental
equation $$$-q\ln q+(1+2\tau)q-1=0$$$.
bSSFP
For bSSFP, the MTF assuming TE=TR/2 is: $$MTF(k)=A\lambda^{2|k|N}+B.$$$$A=M_z(0)\sin\frac{\alpha}2-B,\quad B=\frac{M^0\sqrt{E_2}(1-E_1)\sin\alpha}{1-(E_1-E_2)\cos\alpha-E_1E_2}.$$Here $$$\lambda=E_2\sin^2(\frac{\alpha}2)+E_1\cos^2(\frac{\alpha}2)$$$, and
note that $$$E_2=e^{TR/T2}$$$ in bSSFP. 7
The corresponding PSF is: $$PSF(x)=A\frac{\lambda^N(N\ln\lambda\cos(\pi x)+\pi x\sin(\pi x))-N\ln\lambda}{N^2\ln^2\lambda+\pi^2x^2}+B\ \text{sinc}(\pi x).$$The peak amplitude is also a linear
function of $$$M_z(0)$$$: $$PSF(0)=\frac{A(\lambda^N-1)}{N\ln\lambda}+B=\text{Slope}\ M_z(0)+\text{Intercept},$$ $$\text{Slope}=\frac{\lambda^N-1}{N\ln\lambda}\sin\frac{\alpha}2,\quad\text{Intercept}=(1-\frac{\lambda^N-1}{N\ln\lambda})B.$$The CNR of bSSFP is monotonically
increasing with TR and there is an optimal solution for each TR:$$CNR_{bSSFP}=\frac{\lambda^N-1}{\ln\lambda}\sqrt{\frac{TR}N}\sin\frac{\alpha}2.$$$$N^*=\frac{1.26}{\ln m},\quad \alpha^*=\arccos\frac{2m-E_1-E_2}{E_1-E_2},\quad CNR_{bSSFP}^*=0.64\sqrt\frac{TR(E1-m)}{-(E_1-E_2)\ln m}.$$Here $$$m=max\{q(E_1),E_2\}$$$, and $$$q(E_1)$$$ is a solution of the transcendental equation $$$-q\ln q+q-E_1=0$$$.
When $$$T1<\frac{-TR}{-TR/T2+\ln{(1+TR/T2)}}$$$, $$$\alpha^*=180^{\circ}$$$. In this case, a smaller FA can be chosen with some CNR sacrifice
characterized by the factor $$$\eta$$$: $$N_{\eta}^*=\frac{1.26\eta^2T2}{xTR},\quad \alpha_{\eta}^*=2\arccos\sqrt x,\quad CNR_{\eta,bSSFP}^*=\eta CNR_{bSSFP}^*.$$Here $$$x$$$ is the solution of the
transcendental equation $$$\frac{x\ln E_2}{\ln{(E_2x+E_1-E_1x)}}=\eta^2$$$.
TSE
This
work focuses on TSE with only 180° refocusing pulses. The MTF is: 5$$MTF(k)=M_z(0)E_2e^{2|k|r}.$$Here $$$ E_2=e^{-ESP/T2}$$$ and $$$ r=\frac{ESP\times N}{T2}$$$, where ESP is the echo spacing.
The PSF is: 5$$PSF(x)=M_z(0)E_2\frac{e^{-r}(\pi x\sin(\pi x)-r\cos(\pi x))+r}{r^2+\pi^2x^2}.$$The peak amplitude is proportional
to $$$M_z(0)$$$: $$PSF(0)=\frac{1-e^{-r}}rE_2M_z(0).$$The CNR is: $$CNR_{TSE}=(1-e^{-r})E_2\sqrt\frac{T2}r.$$It
is maximized ($$$=0.64E_2\sqrt{T2}$$$) when $$$r=1.26$$$. 5 The
optimal CNR will decay monotonically with longer ESP.Methods
Transcendental equations are solved
numerically in MATLAB (Mathworks Inc.). An example is studied with T1=1000ms,
T2=100ms and T2*=50ms. We chose some typical sequences in this example: TFE
(TR/TE=10/1.5ms), bSSFP (TR/TE=5/2.5ms) and TSE (ESP=10ms). The optimal choice
of some other typical pairs of T1 (250-4000ms) and T2 (40-2000ms) values are
also given.Results
Figures 1 demonstrates the MTF (top)
and PSF (middle) of variant Mz(0), and the linearity of peak-amplitude and Mz(0) (bottom) of typical TFE, bSSFP and TSE sequences. TFE has the largest peak-amplitude
loss and large intercept (bias) increase when TR is 8× prolonged. The peak-amplitude
loss of TSE is minimum.
Figure 2 demonstrates the MTF (top)
and PSF (middle) of different TFE/TSE factors, and corresponding FWHM and CNR
(bottom). FWHM of TFE (1.2-2pixels) and bSSFP (1.2-1.6pixels) are increased
slower than TSE (1.2-4.5pixels). CNR* of bSSFP and TSE are similar (~6). Compared
to TSE (N*=~13), bSSFP achieves this optimal CNR with a much larger TFE factor (N*=~50).
Figure 3a shows a concave CNR map of
the TFE sequence at TR=10ms as a function of FA and TFE factor. The maximum CNR
(2.51) found at N*/α*=12/25° meets the analytical
solution. Figures 3b-3e shows monotonically decreasing N* and increasing α*, ACQ, and CNR*TFE as TR increases.
Figures 4a-4e and Figures 4f-4j
demonstrate CNR maps and N*,α*, ACQ and CNR*bSSFP with two different T1/T2
values. When T1=1000ms and T2=100ms, $$$T1<\frac{-TR}{-TR/T2+\ln{(1+TR/T2)}}$$$ and the optimal 100%, 99%, 95%
and 90% CNR with α*/N*=180°/25, 128°/31, 85°/50 and 64°/71, meet the analytical solution.
For all 3ms≤TR≤10ms, small CNR sacrifice (1%-10%) lead to a large decrease in
FA (52°-116°) and increases in TFE Factor and ACQ.
Table 1 provides the analytical solutions of N*, α*,
ACQ, FWHM and CNR* of the selected TFE, bSSFP and TSE
sequences with some typical T1/T2/ T2* values. Discussion and Conclusion
This
work provides guidance to choose TFE, bSSFP and TSE parameters based on
analytical formulation, which is also a useful tool to analyze and compare
signal loss and blurring effects. Considering CNR and FWHM, bSSFP is especially
suitable for large TFE factors. Long TR and short TE are suggested for TFE, suitable
for spiral acquisitions.Acknowledgements
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