Lars Bielak1,2, Thomas Lottner1, and Michael Bock1,2
1Dept.of Radiology, Medical Physics, Medical Center University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany, 2German Cancer Consortium (DKTK), Partner Site Freiburg, Freiburg, Germany
Synopsis
A novel sequence design based on radial fast
spin echo with interleaved diffusion sensitization for simultaneous ADC and T2
mapping is presented. Additionally, a model restriction to a conventional
compressed sensing reconstruction is implemented to support higher
undersampling during acquisition. Simulations and phantom measurements show accurate
measurement of diffusion ADC and T2 with as few as 11 spokes per TE,
and 45 different TEs.
Introduction
T2- and
diffusion-weighted (DW) MR images are essential in protocols for breast,
prostate, or head and neck cancer1–3. The serial acquisition of these two MR contrasts can be
time-consuming, and a co-registration is difficult, as DWI is typically using
echo-planar acquisitions, that are prone to image distortion, whereas T2w
protocols often utilize fast spin echo sequences with an excellent geometric
accuracy. To overcome some of these problems, several pulse sequences have been
proposed to acquire diffusion ADC and T2-maps in a single acquisition4–7. Here, we present a new radial fast spin echo (FSE) sequence that
interleaves diffusion weighting and multi-echo acquisition in an echo train,
and uses a compressed sensing reconstruction to accelerate the acquisition.Materials and Methods
Pulse-Sequence
A radial FSE sequence
for simultaneous T2 and ADC measurements was implemented which employs a spin
echo train with multiple acquisitions that is interleaved by diffusion
sensitization blocks. Thus, each echo train acquires a unique set of radial
k-space spokes with different echo times ΔTE and b-values (Figure 1). For identical ΔTE-b-pairs, the echo train
is measured repeatedly to sample additional k-space spokes. Furthermore, the
echo spacing ΔTE is varied to acquire additional ΔTE-b-pairs. Radial spokes are acquired with a Golden Angle increment
so that no spoke is measured more than once.
Reconstruction
To reconstruct
the parameter maps of T2 and D (i.e., the ADC), a compressed sensing
reconstruction algorithm was implemented (8):
$$I_{\text{Recon}}=\arg\underset{x}{\min}\left(\lVert\mathcal{F}\left(\mathcal{F}^{-1}\left(x\right)-y\right)\rVert_2+\lambda\,\lvert\text{TV}\left(x\right)\rvert_1\right)$$
where
$$$x$$$ is the current image estimate, $$$y$$$ the measured raw-data, and $$$\mathcal{F\left(x\right)}$$$ and $$$\mathcal{F}^{-1}\left(x\right)$$$ are the non-uniform (inverse) Fourier
transforms, $$$\lambda$$$ is an adjustable weight and $$$\text{TV}\left(x\right)$$$ the total variation in both spatial dimensions.
The optimization problem is solved using conjugate gradients. Additionally, the signal equation
$$S=S_0e^{-bD}e^{-\frac{t}{T_2}}$$
is
incorporated as prior knowledge
in the iterative reconstruction algorithm. After each iteration, the current
estimate $$$x$$$ is replaced by $$$x^\prime$$$,
with
$$x^\prime=\mathcal{E}^{-1}\left(\mathcal{E}\left(x\right)\right)e^{-i\phi\left(x\right)}$$
Here,
$$$\mathcal{E}\left(x\right)$$$ is the double exponential pixelwise least
squares fit of $$$x$$$,
yielding the parameter maps $$$S_0$$$, $$$D$$$, and $$$T_2$$$.
$$$\mathcal{E}^{-1}\left(x\right)$$$ is the inverse function that generates signal
intensities $$$S\left(b,D,t,T_2\right)$$$ from the parameter maps. Since $$$\mathcal{E}$$$ is only
defined on absolute values, the phase $$$\phi\left(x\right)$$$ is
added from the original images.
Simulation
Phantom data were
simulated with three different ΔTE = [11, 11.5, 12] ms, and an echotrain with 15 readouts and
diffusion blocks after 3 readouts each was used resulting in 45 TE between 11–288 ms and b-values between 0-831 s/mm2. To assess the robustness
against noise, complex Gaussian random noise (SNR=25 and 50) was added to a fully
sampled data set.
Phantom Measurements
The sequence was
implemented on a clinical 3T MRI system (PRISMA, Siemens, Erlangen, Germany)
using the sequence prototyping environment PulseSeq9. Phantom images were acquired with the same parameters as in the
simulation. For reference measurements, a standard diffusion weighted EPI with
b=[50, 400, 800] s/mm2 and a FSE sequence with 32 echoes between 13-442 ms were used.Results
Simulation
Figure 2 shows the simulation results for a varying number of spokes for infinite SNR. Robust reconstruction with less than 0.85% deviation in ADC and T2 can be achieved with 11 spokes or more. When noise is added (Figure 3) a similar behavior is
seen: T2 deviates at most by 1.9/2.2% for SNR of 50/25 for 11 or more spokes,
whereas the ADC shows a stronger bias of 2.8/12.6% (Figure 4). The standard deviation
of estimated ADC values does not decrease significantly if more than 25 spokes
are acquired, and never falls below [0.10, 0.27, 0.40]·10-3mm2/s
for SNRs of [∞, 50, 25]. Similarly,
the T2 standard deviations never fall below [5.2, 18.9, 56] ms with the
smallest deviation at 40 spokes.
Phantom Measurement
In the phantom measurements
for 11/30 spokes per ΔTE-b-pair (Figure 5), ADC values agree with the
DW-EPI measurement for the highest ADC, but show a systematic deviation of up to 0.26·10-3 mm2/s towards smaller ADCs. Lower diffusion values
show smaller signal variations (±0.21·10-3 vs. ±0.96·10-3 mm2/s for ADC≈2 mm2/s). The
T2 measurement shows best agreement with the reference measurement for T2<0.4s.
Reconstruction
with only 11 instead of 30 spokes produces consistent results in the ROI-based
analysis (Figure 5). ADC in all ROIs and T2
based values in ROIs 2 and 3 show a significantly larger standard deviation compared
to the reconstruction based on 30 spokes.Discussion and Conclusion
In this work we
proposed a sequence to measure ADC and T2 simultaneously. With the proposed
parameters (11 spokes per ΔTE-b-pair, ΔTE = [11, 11.5, 12] ms and 4 diffusion blocks) and a TR of 5 s, ADC and T2 maps for 18 slices can
be measured in less than one minute. Since the b-value gradually increases over
the echotrain, strong motion related random phase fluctuations are less
probable, which allows the use of a multi-excitation procedure. A good slice
profile should be used, as stimulated echoes can arise from imperfect
excitation/refocusing which manifest in severe artifacts, thereby violating the
model assumption in the reconstruction. The sequence circumvents distortion artifacts
typical for EPI-based sequences by high bandwidths and the radial acquisition
scheme.Acknowledgements
No acknowledgement found.References
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