Yibo Dan1, Hongyue Tao2, Chengxiu Zhang1, Chenglong Wang1, Yida Wang1, Shuang Chen2, and Guang Yang1
1Shanghai Key Laboratory of Magnetic Resonance, East China Normal University, shanghai, China, 2Department of Radiology, Huashan Hospital, Fudan University, shanghai, China
Synopsis
The naked eye can only recognize the morphological
changes of cartilage and subchondral bone on conventional MRI, but cannot
recognize the subtle changes in their internal structure. The aim is to use radiomics to evaluate the cartilage and
subchondral bone changes in patients with chronical ankle joint instability
(CAI) on conventional MRI images1. We built a pipeline to
automatically identify CAI from FS-PD images. The pipeline automatically
segmented cartilage regions and subchondral bone (5mm) regions, then used SVM
based on radiomics features extracted from these regions for classification. In
the test dataset, the proposed model achieved an AUC of 0.965.
Background
Chronic lateral ankle instability (CAI) keeps the
hindfoot joint in a state of abnormal stress for a long time, which causes the
ankle and subtalar articular cartilage to degenerate and damage, and accelerates the occurrence of osteoarthritis2. Cartilage damage and collapse caused by abnormal stress will affect
the subchondral bone. Therefore, detecting the potential cartilage degeneration
and subchondral bone changes in the ankle joint instability is helpful for
clinical evaluation and interference with ankle joint instability3.Methods
We retrospectively collected 401
fat-suppressed Proton Density MRI cases (215 CAI, 186 normal
control, NC) from Huashan Hospital of Fudan University. We randomly split the
dataset into training (151CAI/130NC) and testing dataset (64CAI/56NC). Two
experienced radiologists manually outlined the 8 cartilage regions
in each case.
The flowchart of whole pipeline was shown
in Figure 1. Firstly, a model based on attention U-net was trained using the labeled
regions of interest (ROIs) to automatically segment eight cartilage ROIs
simultaneously. Then 8 subchondral bone 5mm ROIs corresponding to these
cartilage regions were calculated geometrically from the results of automated
segmentation. A typical case with all segmented ROIs was shown Figure 2.
For each cartilage region, radiomics model
was built to classify CAI and NC. The selected features from these models were concatenated
to build a combined
model for cartilage regions. The same was done for the
eight corresponding subchondral bone regions. We concatenated
retained features in the two combined models again to build the final classification
model.
To build a radiomics model for an ROI, Firstly,
we used Pyradiomics to extract first-order and texture features from the ROI in
the original image, wavelet, and the LoG filtered image. Altogether 1116
features were extracted from each ROI. The features were normalized by
subtracting mean and divided by range. The training dataset was balanced with SMOTE4. Then, Pearson
Correlation Coefficient (PCC) was used to remove redundant features and RFE was
used to select features with 5-fold cross validation in the training dataset. Finally,
a supported vector machine (SVM) model was built with the selected features. All
of the above processes were implemented using an open-source software FeatureExplorer5.RESULTS
In the testing dataset, we
used receiver operating characteristic (ROC) curves of the three combined models, the rad score and calibration curve to
evaluate the performance of the model. The area under the ROC curve (AUC) of
model for each cartilage region was in the range of [0.705, 0.864], as shown in
Fig. 3a. The AUC for each subchondral bone region was in the range of [0.659,
0.761], shown in Fig. 3b. The classification results of models used all
cartilage regions and all subchondral bone ROIs were shown in Fig. 4a. The
final model achieved the highest AUC of 0.965 (95%CI: 0.932-0.989, p<0.001),
and a sensitivity of 0.921, a specificity of 0.910, a negative predictive value
(NPV) of 0.910, and a positive predictive value (PPV) of 0.921.DISCUSSION
In this study, the combined model for cartilage
and subchondral bone regions both achieved accurate prediction performance and the
results showed that CAI is not only related to the cartilage regions, but also related
to subchondral bone 5mm regions. This implies the change in the internal
structure of subchondral bone may be associated with the CAI. The final model
achieved an AUC of 0.965, indicating the proposed pipeline can be used to
precisely differentiate CAI from NC from FS-PD MRI images. This is also
demonstrated in the radiomics score plot and the calibration plot in Figure 4. The
selected features and their corresponding coefficients in the final model were listed
in Table 1. It can be seen that FO10percentile, GLRLMGrayLevelNonUniformityNormalize,
GLRLM GrayLeveINonUniformityNormalize features contribute the most
to the model, indicating the change of proton density and the uniformity of the
proton distribution may be associated with CAI. Finally, clinicians should
focus on and intervene the regions of lateral talus surface of the cartilage
subtalar joint and the lateral talus surface of the subchondral bone 5mm
subtalar joint which were most different between CAI and NC. A primary
limitation of this study lies in that the final model contains more than 30
features, which makes the model difficult to interpret. We will try to simplify
the model in a meaningful way to see whether it can tell us more about the
changes of the internal structures in cartilages and subchondral bones in CAI
patients.CONCLUSION
In summary, CAI was related to cartilage and
subchondral bone regions. A fully automatic pipeline that used features from
both these regions can effectively help radiologists to identify CAI from NC
from FS-PD MRI images.Acknowledgements
No acknowledgement found.References
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