Rui Vasco Simoes1, Rafael N Henriques1, Beatriz M Cardoso1, Francisca F Fernandes1, Jonas L Olesen2, Sune N Jespersen2, and Noam Shemesh1
1Champalimaud Research, Champalimaud Foundation, Lisbon, Portugal, 2Center of Functionally Integrative Neuroscience (CFIN) and MINDLab, Department of Clinical Medicine, Aarhus University, Aarhus, Denmark
Synopsis
Glioblastoma multiforme has been reported to
rely both on glycolysis and oxidative metabolism but methods are lacking to assess such
heterogenity in vivo. We previously showed a novel application of Marchenko–Pastur PCA denoising (MP-PCA) to dynamic glucose-enhanced deuterium MRS
(DGE 2H-MRS). Here, we use this approach to measure glycolytic
and oxidative metabolic turnover rates in mouse glioma, thereby assessing their
functional metabolic heterogeneity. This methodology can be extended to other
cancer models and is available for clinical translation, holding strong
potential for improving non-invasive cancer phenotyping and/or assessment of
early therapeutic response.
INTRODUCTION
Tumor metabolism relies on avid glucose consumption, typically
imaged by 18F-FDG PET. This leads to high glucose-derived lactate
synthesis rates (Warburg effect or aerobic glycolysis) and secretion to the tumor
microenvironment, with concomitant acidification which in turn facilitates proliferation
and invasion [1,2]. In the case of glioblastoma multiforme (GBM), the most
aggressive form of primary brain tumors in adults, metabolic dependencies on glutamine and acetate have
also been reported, from preclinical models to patients, demonstrating the
ability to use both glycolysis and oxidation pathways [3,4]. Assessing this functional
metabolic heterogeneity non-invasively could impact clinical management, but is
hampered by the current MR modalities available for detecting fluxes, mostly
based on 13C-MRS. Here, we combined dynamic glucose-enhanced
deuterium MRS (DGE 2H-MRS) with Marchenko–Pastur PCA denoising (MP-PCA) [5] to
measure glycolytic and oxidative glucose turnover rates in a mouse glioma
model.METHODS
All animal experiments were preapproved
by institutional and national authorities, and carried out according to
European Directive 2010/63.
MR setup.
All experiments were performed on a 9.4 T
scanner (Bruker BioSpec), using a customized 2H/1H
transmit-receive surface coilset (NeosBiotec): 2H, 11 x 15 mm inner loop,
optimized for the mouse head; 1H, butterfly configuration, providing
quadrature B1 field orientation. 2H-MRS data were
acquired using a pulse-acquire sequence, with 175ms TR, 256 points, 1749 Hz,
51º flip angle, and outer volume suppression (OVS) with 6 pulses (10mm slabs),
to excite only the tumor region.
In vivo experiments.
High-grade gliomas were induced in n=5 mice by intracranial
stereotactic injection of 1E5 GL261 cells in the caudate nucleus [6] and
studied 2-3 weeks post-implantation. Before each experiment, mice fasted 4-6h, were
weighed (18-24g), cannulated in the tail vein, and placed in the animal holder under
anesthesia (1-2% isoflurane in 29% O2), where they were heated with a
recirculating water blanket, and monitored for rectal temperature (36-37ºC)
and breathing (60-80 BPM); the i.v. catheter was connected to a home-built
injection system filled with 6,6′-2H2-glucose (1.6M). Animals
were first imaged with T2w 1H-MRI (x8 RARE, 3000 ms TR, 40 ms
TE; 2 averages, 1 mm slice thickness, 70μm in-plane resolution). DGE 2H-MRS data were then acquired for 90
min (32k repetitions), with 6,6′-2H2-glucose i.v. bolus at 12 min (2 g/Kg, injected over 30
s).
Data analysis.
MRI/MRS data were processed in MATLAB® R2018b, ImageJ 1.53a, and jMRUI 6.0b.
For
each animal, the tumor region was manually delineated from T2w 1H-MRI data and
pixel intensities from each slice normalized to a reference region (ROI in
cortex, from contra-lateral hemisphere). Pixel distributions for each tumor
were analyzed for skewness, kurtosis, and inter-quartile range (IQR). DGE 2H-MRS were
averaged to 3 min temporal resolution, denoised with Marchenko–Pastur
PCA [7], and analyzed by individual peak fitting using AMARES,
with a basis set for DHO (0 ppm) and 2H-labelled:
glucose (Glc, -0.95 ppm), glutamine-glutamate (Glx, -2.4 ppm), and lactate (Lac,
-3.45 ppm). Original and denoised spectra (SNRDHOi>3) were quantified
using DHO natural abundance as reference (DHOi, 13.88 mM), and metabolite concentrations (CRLB<50%) corrected for T1 and labeling-loss effects, according
to the values reported by de Feyter et al [8] and de Graaf et al [9],
respectively. Finally, ‘Glc->Glx+Lac’ time-course changes were fitted using
a modified version of the ‘Glc->Lac’ model reported by Kreis et al [10], to
estimate several kinetic parameters including the maximum rate of Glc consumption
for Glx and Lac synthesis (Vmax_X and Vmax_L, respectively) and their
confidence intervals (CI). RESULTS
GL261 gliomas (GL5-9) demonstrated
heterogeneity based on T2w 1H-MRI contrast, analyzed by pixel intensity
distributions (Fig 1). DGE 2H-MRS
revealed glucose turnover to
lactate (glycolysis) and glutamate-glutamine (oxidation), which was easier to
detect and monitor with MP-PCA denoising – significant 2-fold increase in SNRDHOi (Fig 2). Glucose, lactate and glutamate-glutamine time-course
changes were modeled with good fitting performance in each tumor, and MP-PCA
denoising improved the time-course detection of glutamate-glutamine without
altering its kinetics (Fig 3). Accordingly, MP-PCA denoising improved the
fitting precision, with estimated parameters always within the original CI
range (Fig 4A) and overall decrease of their amplitudes (Fig 4B), e.g. significant 2-fold decrease in the CI of Vmax_X. The relative maximum rate of Glc consumption for Glx synthesis (Vmax_X/Vmax_G) varied across
different gliomas and correlated with T2w pixel distribution metrics, more significant upon MP-PCA denoising (Fig
5).DISCUSSION
GL261 gliomas demonstrate
heterogeneity in their microenvironment as detected in GBM patients, shown here
by T2w 1H-MRI and DGE 2H-MRS. The latter revealed differences in
glycolytic and glucose oxidation rates across different tumors, which could be
quantified with higher precision following MP-PCA denoising of the spectra.
Glucose oxidation rates demonstrated correlation with T2w 1H-MRI metrics associated
with heterogeneity, consistent e.g. with increasing hypoxia during glioma progression. We are currently
validating these results on a larger animal cohort.CONCLUSION
Functional metabolic heterogeneity can be assessed in
mouse glioma with DGE 2H-MRS. This
methodology can potentially be extended to other cancer models, holding strong
potential for improving non-invasive cancer phenotyping and/or assessment of
early therapeutic response.Acknowledgements
This work was developed with support from the vivarium
of the Champalimaud Centre for the Unknown, a research infrastructure of
CONGENTO co-financed by Lisboa Regional Operational Programme (Lisboa2020),
under the PORTUGAL 2020 Partnership Agreement, through the European Regional
Development Fund (ERDF) and Fundação para a Ciência e Tecnologia (Portugal),
under the project LISBOA-01-0145-FEDER-022170. Funding
Support: Champalimaud Foundation; H2020-MSCA-IF-2018,
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