Mahrshi Jani1, Ivan Dimitrov1, Bei Zhang1, Binu Thomas1, and Anke henning1
1Advance Imaging Research Center, UT Southwestern Medical Center, Dallas, TX, United States
Synopsis
To
perform magnetic resonance imaging (MRI) and magnetic resonance spectroscopy
(MRS)in high and ultra-high field homogeneity of field (B0) is
required to improve image quality and obtainable metabolic information form MRI
scan. In this work we present, real shim field calibration to improve
homogeneity of B0 field. The vendor implemented B0 shim
system consists of one 0th order, three 1st order, five 2nd
order and seven 3rd order shim coils. The proposed calibration to be
implemented in existing stand-alone Philips system and further application
software shall be developed to integrate latest algorithms and methods to B0
shimming.
Introduction
One of the many
challenges of ultrahigh field strengths In MRI is inhomogeneity of B0
field. In clinical MRI system shimming hardware is available till either first
order or till the second order. For the high field systems inhomogeneity of B0
field creates various artifacts. Vendor implemented B0 shimming
algorithm assumes that the shim fields generated by each coil are identical to
the desired spherical harmonic function. If this is not the case, then to
improve shim shimming needs to be done iteratively. The alternate approach is
to acquired field maps and for each shim coil to correct field inhomogeneity [1]. Methods
All data was acquired at a Philips Achieva 7T whole
body human MR imaging system (Philips Healthcare, Amsterdam,
Netherlands) with a dual TX head coil (Nova Medical). The vendor implemented B0
shim system consists of one 0th order, three 1st order,
five 2nd order and seven 3rd order shim coils.
To
investigate the quality of the vendor implemented shim system calibration
matrix non-water suppressed spectra using a PRESS sequence were acquired from a
small voxel in the isocenter (20x20x20 mm) and a large voxel (200x200x200 mm)
encompassing large parts of a spherical phantom. The phantom had a diameter of 300 mm and contains 0.011g MACROLEX blue per liter.
To further characterize
the shim system reference field maps of
each shim coil were measured using the same spherical phantom. The B0-mapping
sequences had a delta TE of 0.25ms, as this ensures that fat and water are in
phase, and it minimizes the amount of phase wrapping in the B0 map.
Any phase unwrapping that was required was performed using FSL prior to further
analysis. The reference fields of each of the 15 shim coils were acquired at a different
range of current amplitudes in order to determine the relationship between shim
field strength and output current strength of the shim amplifier, which also varies for each shim coil [1].
To further
investigate the linearity of the shim amplifiers each shim coil was first selected individually, and the respective
relationship between the respective shim field (in mT/mn) and the applied
current (in A) was measured from the shim amplifier (Resonance Research Inc). In
addition, all shim amplifier modules for all shim coils were operated at ones
in another test. Results & Discussions
Figure
1 (a) shows the non-water suppressed spectra for a small voxel (20x20x20 mm) in
the isocenter and a large voxel (200x200x200) mm in a spherical phantom (per
Liter MARCOL-oil: 0.011g MACROLEX blue). While the vendor pre-implemented 3rd
order shimming routine converges in the small voxel; this is not the case for
the large voxel. Hence the shim calibration done by vendor’s implemented method
is not suitable for the large voxel 3rd order B0 shimming.
A
comprehensive characterization was performed to investigate further. Figure 2 and 3 show the acquired field maps of different shim terms
and the ideal shim field models representing spherical harmonic functions. The upper
row in both figures shows the acquired
field maps for different shim fields and the bottom row shows the respective ideal
shim field models . We can clearly see that for the first order and second
order shim coils the acquired field maps and ideal shim field models are almost
identical for all respective shim terms. But for the third order shim terms
there is a strong linear term present in all the acquired real field maps for
all shim terms and there is not much difference in between the acquired field
maps for different third order shim coils. This finding demonstrates the need
for real shim calibration and the limitation of the 3rd order shim
system at hand due to a lack of orthogonality of it’s shim terms.
Figure 4 (a) shows the linear behavior of shim amps. When we turn on
each shim coil individually and apply shim field gradually the change in
current with respect to applied shim field is linear. In Table 1 (b) we have
applied 70% of maximum shim field applicable for
all shim coils and still confirm a linear behavior and a close match of measured
and theoretical shim field and shim current values.
In future work the full shim calibration matrix will be
derived from these data and implemented into a custom written shim software. Instead of using Vendor's implemented algorithms, we will use the acquired real shim field maps and model
these real shim fields as a linear combination of ideal spherical harmonic shim
fields of different orders [1].Conclusion
The vendor implemented 3rd order shim system of a
7T whole-body human MRI scanner was characterized. It was found that the shim
system shows a linear behavior of the relationship between shim current
strength and shim field strength. The 1st and 2nd order
spherical harmonic shim coils produce shim fields that closely match the ideal
shim fields. However the 3rd order spherical harmonic shim coils
produce shim fields that largely deviate from the ideal shim fields and exhibit
strong linear field contaminations. This demonstrates that successful 3rd
shimming requires a real shim field calibration and a shim system that
delivers orthogonal 3rd order shim terms. Acknowledgements
This work
was performed at the facilities of Advance Imaging Research Center (AIRC) at
the University of Texas Southwestern Medical Center from Cancer Prevention and
Research Institute of Texas (CPRIT) grant / RR180056.References
Reference
[1] Paul Chang, Sahar Nassirpour, Anke Henning. Modeling Real Shim
Fields for Very High Degree (and order) B0 Shimming of Human Brain
at 9.4 T. Magnetic Resonance in Medicine 79:529–540
(2018).
[2] Ariane Fillmer,
Thomas Kirchner, Donnie
Cameron, and
Anke Henning. Constrained Image-Based B0 Shimming
Accounting for “Local Minimum Traps” in the Optimization and Field inhomogeneity
Outside the Region of Interest. Magnetic Resonance in Medicine 73:1370–1380
(2015).
[3] Ariane Fillmer,
Signe Johanna Vannesjo, Matteo
Pavan, Milan
Scheidegger, Klaas
Paul Pruessmann, and
Anke Henning. Fast Iterative Pre-Emphasis Calibration
Method Enabling Third-Order Dynamic Shim Updated fMRI.
Magnetic
Resonance in Medicine 75:1119–1131 (2016)