Arthur Jourdan1, Arnaud Le Troter2, Pierre Daude2, Stanislas Rapacchi2, Catherine Masson1, Thierry Bege1,3, and David Bendahan2
1Aix-Marseille Univ, Univ Gustave Eiffel, IFSTTAR, LBA, Marseille, France, 2Aix Marseille Univ, CNRS, CRMBM, Marseille, France, 3Department of General Surgery, Aix Marseille Univ, North Hospital, APHM, Marseille, France
Synopsis
A novel
semi-automatic post-processing method dedicated to real-time dynamic MRI aiming
at a fast and reliable quantification of abdominal wall muscles deformations.
The described method combines a highly accurate supervised 2D+t segmentation
procedure of the abdominal wall muscles (mean Dice similarity coefficient of 0.95 ± 0.03), the quantification of muscles
deformations based on masks registration and the mapping of deformations within
muscle compartments leveraging a dedicated parcellation. The present genuine method
provides a quantitative analytical frame that could be used in further studies
for a better understanding of abdominal wall deformations in physiological and
pathological situations.
INTRODUCTION
Real-time dynamic MRI is a
promising modality in the field of medical imaging given its capacity to
capture organs motion and deformation1–3. Although of interest, kinetic imaging of the abdominal wall is largely
underused in clinical practice. More particularly, quantification of movement
and deformations of abdominal muscles could bring valuable information in medical
diagnosis and potentially shed light to better understand functional decline in
certain neuromuscular diseases or any situations involving abdominal muscle deficiency.
However the medical community is still lacking
a standardized MRI protocol coupled with post-processing methods which would
provide accurate and quantitative information that could be used by clinicians.
A semi-automatic post-processing method dedicated
to real-time dynamic MRI aiming at a fast and reliable quantification of
abdominal wall muscles deformations during a controlled breathing exercise is
reported.METHODS
Ten
healthy subjects (33.5 ± 10.8 y.o., 5 females) were imaged during a controlled breathing
session at the L3-L4 disc level using real-time dynamic MRI at 3T. A coarse waist
circumference (WC) feature tracking step allowed the selection of the
inhalation cycle maximum abdominal excursion (figure 1).
(i) Over
the corresponding image series, the abdominal wall muscles were segmented using
a supervised 2D+t segmentation procedure as illustrated in figure 2 (section B).
For this purpose 5 slices were manually segmented and propagated
to the remaining slices
using an automatic label propagation algorithm4.
The resulting
segmentation was compared
to the ground-truth manual segmentation based on the computation of Dice
similarity coefficient (DSC) and the Hausdorff distance (HD).
(ii) The
evolution over time of the displacement magnitude of the muscles compared to
their initial position (i.e. end-exhalation) was computed from registration of
the segmented masks as illustrated in figure 2 (section C). For this purpose,
the first mask of the set M0 was consecutively registered toward each
following masks Mi. The validity of the M0 to Mi registration,
and consequently of the displacement magnitude calculation (figure, section E) was
evaluated using the DSC and HD metrics computed between the registered M0 segmented
mask and the corresponding target Mi segmented mask.
(iii) Finally, we mapped the displacement magnitudes
within muscle compartments based on a dedicated automatic parcellation method as
indicated in figure 2 (section D). A polar coordinate system was used to
determine the position of each voxel of the segmented masks and to automatically
split the muscles regions based on depth and angular constraints.RESULTS
The DSC and HD metrics computed between the automatically-segmented
slices and ground truth segmentation were
respectively 0.95 ± 0.03 and 1.9 ± 1.1 mm. The DSC scores for the different
muscle regions varied between 0.93 and 0.96. The HD values varied between 1.81
and 2.03 mm.
The maps related to the magnitude of
displacement resulting from mask registration are presented in figure 3 for a
typical subject. The
DSC and HD metrics computed between the registered source mask M0 and the target mask Mi were respectively
0.98 ± 0.01 and 2.1 ± 1.5 mm.
From the
magnitude of displacement maps, the time dependent change of the average
displacement value within each parcel has been calculated and is shown in
figure 4. Temporally, the magnitude of displacement evolved initially linearly
and then was gradually stabilized towards the end of inhalation. Spatially, displacements
greater than 26 mm were observed in the anterior area of the abdominal wall at
end-inhalation, decreasing to less than 10 mm in the posterior areas. The
parcellation of the lateral muscles highlighted the difference in displacement
between the deep (16.7 mm) and superficial areas (13.2 mm).DISCUSSION
Applied on cine-BSSFP MRI data, our method
allowed to quantify and localize spatially and temporally the abdominal wall
muscles deformations during breathing. The accuracy of the semi-automatic
segmentation procedure was supported by a very high DSC (0.95 ± 0.03) together
with a very low HD (2.3 ± 0.7 mm) and was based on the manual delineation of
only 20% of the data. The robustness of the displacement magnitude calculation
was also supported by a very high DSC (0.98 ± 0.01) together with a very low HD
(2.1 ± 1.5 mm) despite the large muscle deformations associated with
inhalation. Parcellation allowed the attribution of displacement magnitudes to
anatomically relevant muscle substructures which could not be distinguished on
the basis of image contrast.
The distribution of muscular displacements
reported here supports the basic physiological knowledge regarding respiratory
effort5,6 and the corresponding muscle
activation7 and is in agreement previous studies reporting external
measurements conducted at the abdomen surface8,9.
2D dynamic MRI might be considered as limited. However,
this was necessary to achieve sufficient temporal resolution (182 ms) to
correctly evaluate the dynamics of the exercise. In addition, it can be
reasonably assumed that abdominal muscles displacements in the cranio-caudal
direction are negligible and so because the muscular insertions on the bone
rigid frame are likely to constrain the movements in the cranio-caudal
direction.CONCLUSION
The present genuine post-processing method
provides a quantitative analytical frame that could be used in further studies for
the assessment of dysfunctions of the abdominal wall mobility and for a better
understanding of abdominal wall deformations in physiological and pathological
situations.Acknowledgements
We would like to thank Claire Costes, Lauriane
Pini and Patrick Viout (CRMBM/CEMEREM UMR CNRS 7339) for their help in
integrating the volunteers and carrying out the MRI acquisitions, Thomas
Troalen (Siemens Healthineers) for his assistance in the optimization of the MRI
sequences and Morgane Evin from (Gustave Eiffel University) for her help and
insightful comments in the development of the features tracking algorithm. References
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