Nahla M H Elsaid1, Nadine L Dispenza2, R Todd Constable1,3, Hemant D Tagare1,2, and Gigi Galiana1
1Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, United States, 2Department of Biomedical Engineering, Yale University, New Haven, CT, United States, 3Neurosurgery, Yale University, New Haven, CT, United States
Synopsis
Constrained alternating minimization
for parameter mapping (CAMP) improves the image quality in highly accelerated
parameter mapping by incorporating a linear constraint that relates consecutive
images.
Introduction
While
qualitatively weighted images, such as T2w-images, are powerful
clinical tools, quantitative parameter maps may have many advantages as they
show greater consistency across multi-site studies
1, which allows for universal diagnostic
criteria and more robust analyses. However, protocols for quantitative imaging
can be difficult to deploy in many clinical settings because accurate parameter
maps require several images for relaxometry exponential fitting, leading to
long scan times.
CAMP (Constrained Alternating Minimization for Parameter mapping) is a reconstruction approach that alternates between optimizing the image series and the parameter map, but it does so by minimizing a single cost-function that incorporates both (1) consistency between each individual parameter image and its k-space data and (2) adherence of the image series to a linear relaxometry model for each pixel. While proof-of-principle for this method was reported previously 2, the current results provide quantitative
analysis, simulations examining the effect of noise, and comparison to other
TE-regularized reconstruction approaches.
CAMP is studied in both undersampled radial and Cartesian acquisition
schemes.Methods
CAMP
In MR parameter mapping, the complete MRI signal
vector
$$$S(k)$$$ is regarded as a series of signal vectors $$$S_p (k)$$$, each of which samples the k-space $$$k$$$ of a complex weighted image $$$m_p$$$ acquired at different
parameter encoding values (e.g., echo
time TE), through the encoding
matrix $$$E_p$$$ for a total of $$$p$$$ images, where $$$p$$$
is also the number of
echo times sampled.
As described in 2, the relationship of
each parameter map relative to the previous one is $$$m_{(p+1)} (x)=m_p (x)α(x),$$$ where $$$α(x)=exp(\frac{-p∆TE}{T_2 (x)})$$$. Our objective function can be described by $$$J=J_1+J_2+J_3$$$, where $$$J_1=∑_{(p=1)}^P‖S_p-E_p m_p ‖^2$$$ is the
data fidelity term, $$$J_2=τ∑_{(p=1)}^PTV(m_p )$$$ is a TV-norm regularization term,
and finally, $$$ J_3=λ∑_{(x=1)}^N∑_{(p=1)}^{(P-1)}‖m_{(p+1)} (x)-α(x) m_p (x)‖^2 $$$ is the
CAMP constraint. $$$τ$$$ and $$$λ$$$ are
both weighting parameters. The CAMP objective function $$$J$$$ is alternately minimized with respect to $$$m_p$$$ (fixed $$$α$$$) using a non-linear conjugate-gradient method (Polak-Ribiere). 3 It is then minimized with respect to $$$α$$$ (fixed $$$m_p$$$), keeping in mind that $$$α$$$ is real.
Imaging
Radial and Cartesian data were acquired on a 3T MRI scanner (MAGNETOM Trio Tim,
Siemens Healthcare, Erlangen, Germany).
I. Radial T2 TSE
T2w-images were acquired using a TSE
sequence with TR=2500 ms, TE=25, 50, 75, and 100 ms, with a base-resolution of
128, 128 spokes, 3mm slice thickness, ETL= 4, acquisition
time=320 s.
II. Cartesian T2
spin-echo (SE)
T2w-images were acquired using SE sequence with TR=3000 ms, TE=16, 32, 48, 64 ms,
with a base-resolution of 128 pixels, 128 k-space lines, acquisition time=384
s, and 3mm slice thickness.
Reconstruction
Undersampling was performed retrospectively to
achieve complementary k-space data at each TE. CAMP is compared to regularized
CG reconstructions regularized by a TV-norm. In the case of the radial TSE
dataset, we also compared CAMP against the k-space weighted image contrast
(KWIC) method. 4 The
two KWIC radii values used in this implementation were 5 and 10 in units of $$$∆k$$$.
Simulation
CAMP
reconstruction was simulated using Cartesian data where
a T2-template and a proton-density (PD) template were used to
simulate ten T2w-images. Different levels of random complex Gaussian-noise
are added to the k-space of those images.
Assessment
The
quality of the reconstructed map using the undersampled k-space was assessed
using normalized-root-mean-square-error (NRMSE) and high-frequency-error-norm
(HFEN). 5Results
Figure 1 shows T2w-images (TE=75 ms, Figure 1a) and T2-maps (Figure 1b) reconstructed from radial TSE data. The leftmost column of Figure 1a shows T2w-images with KWIC reconstruction using undersampling factors R of 6.3 and 12.6. The columns in each panel correspond to KWIC reconstruction, CG reconstruction using just the data acquired at each echo, and CAMP reconstruction, respectively. At each undersampling (2nd and 3rd row), CAMP has improved image quality compared to the CG and KWIC reconstructed images. When R=12.6 (3rd row), CAMP reconstruction reduced the NRMSE error by 21% and the HFEN by 61% relative to those of CG. While CAMP reduced the NRMSE and by 33% and the HFEN by 65% relative to those of KWIC.
Figure 2 compares reconstructions for fully and undersampled Cartesian T2-mapping. Using CG reconstruction, the coherent Cartesian undersampling artifacts are slightly apparent for example in the TE= 48 T2w-image, while these artifacts are suppressed with CAMP. For example, at R=8 (3rd row), CAMP reconstruction reduced the NRMSE error by 43% and reduced the HFEN by 56% relative to those of CG.
The simulation results shown in Figure 3 demonstrated that CAMP is robust under different undersampling conditions. With different undersampling factors R=1, 2, 4, after adding to the k-space data random Gaussian-noise with 0 mean and standard-deviation σ=100% of the signal arithmetic mean, the noise was not overly amplified in any area of the resulting T2-map. As expected, the NRMSE errors were proportional to the undersampling and added noise, as demonstrated in Figure 4.Discussion and Conclusion
While this work shows just a few examples, CAMP is also applicable to any kind of spatial encoding or undersampling scheme. Significantly, this means that while CAMP is a general approach to reconstruct a wide array of MR parameter mapping strategies, it maintains the accuracy of using a signal model anchored in the physics of the acquisition.Acknowledgements
We note that both Dr. Galiana and Dr.
Tagare contributed equally as senior authors on this work. This work was
funded by the National Institutes of Health under R01EB022030, R01EB012289,
4R01 EB016978, and K01EB16897.References
1. Oh J, Bakshi R, Calabresi PA, et al. The NAIMS cooperative pilot project: Design, implementation and future directions. Multiple Sclerosis Journal.2017;24(13):1770-1772.
2. Dispenza NL, Galiana, G., Peters, D. C., Constable, R. T., Tagare, H. D. Accelerated R1 or R2 Mapping with Geometric Relationship Constrained Reconstruction Method. Paper presented at ISMRM 2019 11-16 May, 2019; Montréal, QC, Canada.
3. Polak E, Ribiere G. Note sur la convergence de méthodes de directions conjuguées. ESAIM: Mathematical Modelling and Numerical Analysis - Modélisation Mathématique et Analyse Numérique. 1969;3(1):35-43.
4. Song HK, Dougherty L. Dynamic MRI with projection reconstruction and KWIC processing for simultaneous high spatial and temporal resolution. Magnetic resonance in medicine. 2004;52(4):815-824.
5. Ravishankar S, Bresler Y. MR Image Reconstruction From Highly Undersampled k-Space Data by Dictionary Learning. IEEE Transactions on Medical Imaging. 2011;30(5):1028-1041.