Gerhard Drenthen1, Jacobus Jansen1, Paulien Voorter1, Joost de Jong1, and Walter Backes1
1Maastricht University Medical Center, Maastricht, Netherlands
Synopsis
Recently,
it was shown that besides the parenchymal diffusion and microvascular perfusion
an additional, intermediate, component can be observed in the IVIM signal. The
fraction of this intermediate diffusion ($$$f_{int}$$$) is suggested to be related to
interstitial fluid in the perivascular spaces (PVS). In
this study we examine several b-value sampling strategies for measuring
the ($$$f_{int}$$$) using simulated IVIM data. When a large intermediate diffusion component is present in the IVIM signal (eg. white matter hyperintensities), b-value sampling strategies specifically aimed to quantify this component can provide better estimates of $$$f_{int}$$$ compared to linear or logarithmic spaced b-values.
Introduction
Intravoxel Incoherent Motion
(IVIM) MR imaging is a diffusion weighted imaging technique that is sensitive
to the diffusion of water in the parenchyma as well as flow-mediated
diffusivity of microvascular blood (perfusion). Commonly, the fraction of
microvascular perfusion in the IVIM signal $$$f_{perf}$$$ is calculated
using a bi-exponential model. Recently, however, it was shown that besides the
parenchymal diffusion and microvascular perfusion an additional, intermediate, component
can be observed [1]. The fraction of the intermediate diffusion is suggested to
be related to interstitial fluid in the perivascular spaces (PVS). PVS are
associated with a number of disorder, ranging from Alzheimer’s disease, stroke
and multiple sclerosis [2]. Therefore, estimating $$$f_{int}$$$ from IVIM data can provide valuable
clinical insights. However, estimating $$$f_{int}$$$ can be
challenging, since three-component models and spectral decompositions of the
IVIM signal are dependent on the acquired b-values and signal-to-noise ratio (SNR).
Therefore, in this study we will examine several b-value sampling strategies
for measuring the $$$f_{int}$$$ using simulated IVIM data. Methods
Numerical
simulations
Ground-truth IVIM data with
three components were computationally synthesized using the IVIM signal decay equation:
$$\frac{S(b)}{S(0)}=\frac{f_{par}E_{1,par}E_{2,par}e^{-bD_{par}}+f_{int}E_{1,int}E_{2,int}e^{-bD_{int}}+f_{perf}E_{1,perf}E_{2,perf}e^{-bD_{perf}}}{f_{par}E_{1,par}E_{2,par}+f_{int}E_{1,int}E_{2,int}+f_{perf}E_{1,perf}E_{2,perf}}$$
Where, $$$E_{1,k}=(1-2e^{-\frac{TI}{T_{1,k}}}+e^{-\frac{TR}{T_{1,k}}})$$$, with $$$k=par$$$ or $$$int$$$; $$$E_{1,perf}=(1-e^{-\frac{TR}{T_{1,perf}}})$$$; $$$E_{2,k}=e^{-\frac{TE}{T_{2,k}}}$$$, with $$$k=par$$$, $$$int$$$ or $$$perf$$$; and $$$f_{par}=1-f_{int}-f_{perf}$$$.
The IVIM parameters used to
simulate the signal decay were $$$f_{int}= .050$$$; $$$f_{perf}=.022$$$; $$$D_{par}=7.15\cdot10^{-4}$$$mm2/s; $$$D_{int}=2.4\cdot10^{-3}$$$mm2/s and $$$D_{perf}=1.63\cdot10^{-2}$$$mm2/s; corresponding to normal
appearing white matter (NAWM). Additionally, data with high $$$f_{int}$$$ were synthesized simulating white
matter hyperintensities (WMHs) using $$$f_{int}= .271$$$; $$$f_{perf}= .024$$$; $$$D_{par}=8.93\cdot10^{-4}$$$mm2/s; $$$D_{int}=2.0\cdot10^{-3}$$$mm2/s and $$$D_{perf}=7.85\cdot10^{-2}$$$mm2/s [1][3]. The following relaxation
times were used; $$$T_{1,par}=1081$$$ms, $$$T_{2,par}=95$$$ms, $$$T_{1,pef}=1624$$$ms, $$$T_{2,perf}=275$$$ms, $$$T_{1,int}=1250$$$ms, $$$T_{2,int}=1500$$$ms
[1][4-7].
To estimate the effects of
acquired b-values on the quantification of $$$f_{int}$$$, 1000 Gaussian noise
realizations were calculated for nine sets of b-values and an SNR of 100 (defined as the signal at b = 0s/mm2 divided by the standard deviation of the noise). Each of the b-values sets that are considered range from 0 to 1000s/mm2.
Three sets were linearly spaced, three were logarithmically spaced, and three had an
oversampling in the range of 300<b<600s/mm2 where $$$b\cdot D_{int}\approx1$$$.
The number of b-values is varied for each sampling strategy (10, 15 and 30).
Figure 1 graphically depicts the nine schemes with different b-values.
Fitting
method
The NNLS uses a predefined
basis set A with M exponential decays to characterize the measured signal $$$y$$$ as; $$$y_i=\sum_j^Ms_je^{-b_iD_j}=\sum_j^M \mathbf{A}_{ij}s_j,i=1,2,..,N$$$ where $$$s_j$$$ is the
amplitude corresponding to the $$$D_j$$$ diffusivity, $$$b_i$$$ is the measured
signal of b-value $$$i$$$ and $$$N$$$ represents the total number of b-values.
Now, the NNLS problem can be written as, $$$\chi_{min}^2=\min_{s \geq 0}(\sum_{i=1}^N\mid\sum_{j=1}^M\mathbf{A}_{ij}s_j-y_i\mid^2)$$$ where $$$\chi_{min}^2$$$ represents the misfit that is minimized by the
NNLS algorithm. Typically, the number of b-values is smaller than the elements
in the basis set (N<M) making the NNLS an ill-posed problem. To provide a
more stable solution, a regularized version of the NNLS can be used, adding a
smoothing constraint, $$$\chi_{reg}^2=\min_{s \geq 0}(\sum_{i=1}^N\mid\sum_{j=1}^M\mathbf{A}_{ij}s_j-y_i\mid^2+\mu\sum_{j=1}^M\mid s_{j+2}-2s_{j+1}+s_j\mid^2)$$$ where $$$\mu$$$ is the regularization parameter and $$$\chi_{reg}^2$$$ is the regularized misfit [8].
A basis set with 120
logarithmically spaced elements ranging from 0.1$$$\cdot$$$10-3 to 1000$$$\cdot$$$10-3 is used. Subsequently,
the $$$f_{int}$$$ is defined as the amplitude fraction of the $$$D_j$$$ elements in the range of 1.5$$$\cdot$$$10-3 to 4.0$$$\cdot$$$10-3. The $$$f_{int}$$$ is corrected for
the effects of inversion and relaxation [1].
Validation
The accuracy of the different
strategies was evaluated using the bias, $$$\hat{f_{int}}-f_{int}$$$, where $$$\hat{f_{int}}$$$ is the mean estimated intermediate fraction, and $$$f_{int}$$$ is the ground-truth intermediate fraction.
The precision of the different
strategies was evaluated by the standard deviation of the estimated intermediate
fraction.Results
The accuracy and precision of the $$$f_{int}$$$ estimation
in terms of bias and standard deviation is shown in figure 2 for the NAWM and
in figure 3 for the WMHs. For the NAWM a linear spacing of the b-values seems
to provide the best trade-off between accuracy and precision. However, for the
WMHs, where a large $$$f_{int}$$$ is present, oversampling the $$$b\cdot D_{int}\approx1$$$ range provides the highest accuracy and precision.Discussion & Conclusion
Interestingly, acquiring more
b-values does not appear to be valuable in the NAWM, as the accuracy drops,
while in the WMHs acquiring more b-values does relate to better performance. This
can be explained; when simulating data with 10 b-values, for roughly 14% of the
noise realizations no third component is found, artificially lowering the
measured $$$f_{int}$$$. The third component
is absent in 6% of the realizations with 15 b-values, and in less than 1% in
the 30 b-values case. This effect, combined with a systematic over-estimation
of the $$$f_{int}$$$, results in the presented behavior. Over-estimation of the intermediate fraction can be contributed to an under-estimation of the $$$D_{par}$$$ and $$$f_{par}$$$, which is a known phenomenon related to the logarithmic distribution of the basis set [9].
When a large intermediate
diffusion component is present in the IVIM signal (e.g. in WMHs), b-value
sampling strategies specifically aimed to quantify this component can provide a
better estimate of $$$f_{int}$$$ compared to linearly or logarithmically spaced
b-values. However, studies interested in measuring $$$f_{perf}$$$ benefit more from logarithmically spaced b-values (which oversamples $$$b\cdot D_{perf}\approx1$$$ range), while a linearly spaced b-value set provides a good trade-off between $$$f_{int}$$$ and $$$f_{perf}$$$ (Figure 4A&B).Acknowledgements
No acknowledgement found.References
[1] Wong SM,
Backes WH, Drenthen GS, et al., Spectral diffusion analysis of interavoxel
incoherent motion MR imaging in cerebral small vessel disease. J. Magn. Reson.
Imaging 2020;51:1170–1180.
[2] Wardlaw
JM, Benveniste H, Nedergaard M, et al., Perivascular spaces in the brain: anatomy,
physiology and pathology. Nat Rev Neurol 2020;16:137–153.
[3] Wong SM, Zhang CE, van Bussel FCG, et al., Simultaneous investigation of microvasculature and parenchyma in cerebral small vessel disease using intravoxel incoherent motion imaging. NeuroImage: Clinical, 2017; 14:216-221.
[4] Simon
JE, Czechowasky DK, Hill MD, et al., Fluid-attenuated inversion recovery preparation:
Not an improvement over conventional diffusion-weighted imaging at 3T in acute
ischemic stroke. AM J Neuroradiol 2004;25:1653-1658
[5] Lu HL,
Clingman C, Golay X and van Zijl PCM, Determining the longitudinal relaxation
time (T1) of blood at 3.0 Tesla. Magn Reson Imaging 2004; 52:679-682.
[6]
Wansapura JP, Holland SK, Dunn RS and Ball WS, NMR relaxation times in the
human brain at 3.0 tesla. J Magn Reson Imaging 1999; 9:531-538.
[7] Stanisz
GJ, Odrobina EE, Pun J, et al., T1, T2 relaxation and magnetization transfer in
tissue at 3T. Magn Reson Med 2005; 54:507-512.
[8] Whittall KP, MacKay AL. Quantitative interpretation of NMR relaxation data. J Magn Reson. 1989; 84:134-152.
[9] Drenthen GS, Backes WH, Aldenkamp AP, et al. A new analysis approach for T2 relaxometry myelin water quantificiation: Orthogonal Matching Pursuit. Magn Reson Med 2019; 81:3292-3303.