Jie Liu1, Hui Liu2, Qi Liu2, Jian Xu2, Hairong Zheng1, and Yin Wu1
1Paul C. Lauterbur Research Center for Biomedical Imaging, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China, 2United Imaging Healthcare America, Houston, TX, United States
Synopsis
Optimization of acquisition
strategies plays a key role in CEST-MRF imaging. However, an effective method to
assess the performance of acquisition strategies in CEST quantification is
lacking. In this study, we proposed a Cramer-Rao bound (CRB) based metric to
measure the accuracy of CEST-MRF in pH quantification under various acquisition
schemes. The results of both simulation and phantom experiments showed that the
CRB-based index outperformed the conventionally used dictionary similarity metrics
that are measured with dot products and Euclidean distance,
implying that the proposed algorithm has great potential in optimizing CEST-MRF
imaging for improved pH measurement.
Introduction
Magnetic
resonance fingerprinting (MRF) is a new quantitative technique that uses
pseudorandomized acquisition scheme to create unique signal trajectories for
different tissue parameters,1 which has been applied to CEST imaging for reduced scan time and improved quantitation accuracy.2, 3 So far, various acquisition strategies were employed empirically, and their performance in CEST-MRF quantification remains to be elucidated. In this work, we proposed an algorithm that uses Cramer-Rao bound (CRB) based metric to evaluate the performance of acquisition strategies of CEST-MRF imaging in pH quantification with simulation and phantom experiments. Materials and methods
Theory: The CRB-based metric is designed as follows:
$$CRB^{glob}=\frac{1}{N_{D}}\sum_{(i,j)\in\Omega}\sqrt{[V^{i,j}(\theta)]_{1,1}},$$
where, $$$V^{i,j}(\theta)=[I^{i,j}(\theta)]^{-1}$$$ denotes the CRB matrix and [Vi,j(θ)]1,1 is the first diagonal entry, for exchange rate is assigned as the first varying parameter. The set Ω contains all the dictionary indices and ND is the number of dictionary entries. θ contains the varying parameters in the dictionary, including exchange rate (kex) and proton concentration (fr). Let $$$I^{i,j}(\theta)=\sum_{l=1}^L[J^{i,j}_l(\theta)]^{T}J^{i,j}_l(\theta)$$$, and
$$$J^{i,j}_l(\theta)=[\frac{d^{i+1,j}[l]-d^{i,j}[l]}{\log{k_{ex}^{i+1,j}}-\log{k_{ex}^{i,j}}},\frac{d^{i,j+1}[l]-d^{i,j}[l]}{f_r^{i,j+1}-f_r^{i,j}}]$$$, where di,j[l] indicates the lth value of dictionary entries .
The CRB-based metric is compared
with the metrics using dot products (DP) and Euclidean distance (ED) of dictionary entries and Frobenius norm, 4 which representing dictionary similarity.
Simulation: Performance of CRB-, DP- and ED-based metrics in assessing
the accuracy of CEST-MRF in pH quantification was investigated and
compared under different acquisition strategies of: (1) different exchange rates with noise contamination ; (2) randomized saturation powers (B1)
from 0.2 to 1.5 μT, or saturation frequency offsets from 1.3 to 2.3 ppm, or saturation
times in the range of 0-4 s, or recovery time from 1 to 6 s; (3) randomized B1 values
with the maximum B1 value (B1max) ranging between 1 and 3
μT; (4) different acquired image number ranging from 2 to 30.
Monte Carlo (MC) method was used with white
Gaussian noise of 40 dB added to the dictionary entry and the resulted
trajectory was matched to the original dictionary. 5 Both the dot product and the Euclidean distance methods
were employed for matching. 4 pH was
quantified from the obtained exchange rates with the equation of 6:
$$pH\approx\log{k_{ex}}-4602.56\times(\frac{1}{298.15}-\frac{1}{T+273.15})+4.52,$$
where the simulated sample temperature T
= 20℃. For each
dictionary entry, this procedure was repeated 200 times and the root-mean-squared errors (RMSE) of pH were
calculated.
Phantom study: A phantom
consisted of 7 vials containing creatine monohydrate solution with different pH
and concentrations were prepared ( Fig.3g). CEST-MRF images were acquired with an
single-shot FSE readout (flip angle = 160°; TE = 38 ms; slice thickness = 4 mm; in-plane
resolution = 1.25 × 1.25 mm2) on a 3T scanner (uMR 790, Shanghai
United Imaging Healthcare, Shanghai, China). The CEST preparation module
consisted of 50-ms Gaussian saturation pulses with a 50% duty cycle. CEST
effect of creatine were obtained using the asymmetric analysis, and then matched
to the corresponding dictionary in a pixel-wise manner. The RMSE between the
measured and titrated pH values were calculated. Results and discussion
Figure 1a-c illustrate the alteration trend of CRB-, DP- and
ED-based metrics with log (kex). Note that the greater the metric value is, the worse the
kex/pH quantification would be. At a lower noise level of 55 dB (Fig.1f), the
simulation results seemed matched the curve of CMR-based index better, whereas
under higher noise level of 20 dB, inconsistency with the
prediction of all three indexes appeared (Fig.1d). The
noise in phantom study was approximately 40dB, where the overall trend of both
simulation (Figure 1e) and phantom studies (Figure 1g-i) are generally similar
as the prediction of metrics, indicating the metrics are still applicable. Both DP- and CRB-based assessment
metrics showed good capability in
evaluating different acquisition strategies in pH quantification (Table 1). The
strategy of randomizing saturation power showed better performance than that of
saturation frequency offset, in accordance with previous study. 7 For the acquisition strategy of
randomized saturation time and recovery time, pH values could not be quantified
correctly. In the case of evaluating strategies of different B1 ranges (Fig.
2), the curve of CBR-based metric was more consistent with the simulation
results compared to DP- and ED-based metrics. Quantification errors in both the
simulation and phantom studies decreased substantially with acquisition number increases (Fig. 3d-f), in consistent with the prediction of CRB-based metric (Fig. 3a). With fewer acquisition numbers (i.e., 6), pronounced noise can be observed
in the pH map especially in vials with lower pH values (Fig. 3g). Accuracy of pH quantification was remarkably improved with acquisition number increases
(Fig. 3h-i). It is worth noting that both DP-based and ED-based metrics
failed to evaluate the performance of some acquisition strategies in pH
quantification. One of the potential reasons may be that
both
DP- and ED- based index do not take noise propagation
into account during the matching process, resulting in their value unrelated to
the matching errors. On the contrary, the CRB measures the lower bound of
variance of parameter estimation, which is closely associated with quantitative
accuracy.Conclusion
The current study shows the performance of acquisition strategies of
CEST-MRF can be effective predicted with the proposed CRB-based metric, which
might facilitate optimization of imaging parameters for improved pH quantification.Acknowledgements
Grant Support: National Natural Science Foundation of China (81871348 and 91859102) and China Postdoctoral Science Foundation (2019M663186).References
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